RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 MSGN1A6NI15 193 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 ZNF729A6NN14 1252 aaPredicted RBP5.79□□□□□ -1.48
USP39-219ENST00000496047 C17orf100A8MU93 164 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 SHOXO15266 292 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 FGF16O43320 207 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 YPEL1O60688 119 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 CLDN1O95832 211 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 IFNA5P01569 189 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 IGHV1-46P01743 117 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 PRH1P02810 166 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 PRB1P04280 392 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 CD3EP07766 207 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 SEC11BP0C7V7 166 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 CHRNB4P30926 498 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 CD80P33681 288 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 CA7P43166 264 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 SULT1A2P50226 295 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 ARHGDIBP52566 201 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 F2RL1P55085 397 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 TMEM33P57088 247 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 RPP30P78346 268 aaKnown RBP5.79□□□□□ -1.48
USP39-219ENST00000496047 EWSR1Q01844 656 aaKnown RBP eCLIP5.79□□□□□ -1.48
USP39-219ENST00000496047 TLE1Q04724 770 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 BSPH1Q075Z2 132 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 NMSQ5H8A3 153 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 FAM74A1Q5RGS3 127 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 RPL7L1Q6DKI1 246 aaKnown RBP5.79□□□□□ -1.48
USP39-219ENST00000496047 LRP11Q86VZ4 500 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 COMMD1Q8N668 190 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 DRAM1Q8N682 238 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.79□□□□□ -1.48
USP39-219ENST00000496047 LFNGQ8NES3 379 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 OR1L1Q8NH94 360 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 PCNPQ8WW12 178 aaKnown RBP5.79□□□□□ -1.48
USP39-219ENST00000496047 TMED6Q8WW62 240 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 MARC2Q969Z3 335 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 GNPNAT1Q96EK6 184 aaPredicted RBP5.79□□□□□ -1.48
USP39-219ENST00000496047 COQ2Q96H96 371 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 NARS2Q96I59 477 aaKnown RBP5.79□□□□□ -1.48
USP39-219ENST00000496047 ADTRPQ96IZ2 230 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 CIB3Q96Q77 187 aaPredicted RBP5.79□□□□□ -1.48
USP39-219ENST00000496047 YPEL2Q96QA6 119 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 SMIM3Q9BZL3 60 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 GAL3ST2Q9H3Q3 398 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 MS4A5Q9H3V2 200 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 GSX1Q9H4S2 264 aaPredicted RBP5.79□□□□□ -1.48
USP39-219ENST00000496047 MMP26Q9NRE1 261 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 TPSG1Q9NRR2 321 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 COA4Q9NYJ1 87 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 RAXQ9Y2V3 346 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 POLR3KQ9Y2Y1 108 aaPredicted RBP5.79□□□□□ -1.48
USP39-219ENST00000496047 WSB1Q9Y6I7 421 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 ICE1Q9Y2F5 2266 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 CFAP46Q8IYW2 2715 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 WDFY3Q8IZQ1 3526 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 TET2Q6N021 2002 aaPredicted RBP5.79□□□□□ -1.48
USP39-219ENST00000496047 APC2O95996 2303 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 PTPRQQ9UMZ3 2332 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 FBN3Q75N90 2809 aa5.78□□□□□ -1.48
USP39-219ENST00000496047 KALRNO60229 2985 aa5.78□□□□□ -1.48
USP39-219ENST00000496047 hADV38S2A0JD32 116 aa5.78□□□□□ -1.48
USP39-219ENST00000496047 UMAD1C9J7I0 102 aa5.78□□□□□ -1.48
USP39-219ENST00000496047 TRIM77I1YAP6 450 aa5.78□□□□□ -1.48
USP39-219ENST00000496047 K7N7A8 449 aa5.78□□□□□ -1.48
USP39-219ENST00000496047 CCL21O00585 134 aa5.78□□□□□ -1.48
USP39-219ENST00000496047 ITGB1BP1O14713 200 aa5.78□□□□□ -1.48
USP39-219ENST00000496047 SYNGR2O43760 224 aa5.78□□□□□ -1.48
USP39-219ENST00000496047 RBMXL2O75526 392 aaKnown RBP5.78□□□□□ -1.48
USP39-219ENST00000496047 FGF2P09038 288 aa5.78□□□□□ -1.48
USP39-219ENST00000496047 OR4A8P0C604 315 aa5.78□□□□□ -1.48
USP39-219ENST00000496047 EGR1P18146 543 aa5.78□□□□□ -1.48
USP39-219ENST00000496047 CCKARP32238 428 aa5.78□□□□□ -1.48
USP39-219ENST00000496047 SSTR5P35346 364 aa5.78□□□□□ -1.48
USP39-219ENST00000496047 LPAR6P43657 344 aa5.78□□□□□ -1.48
USP39-219ENST00000496047 GLIPR1P48060 266 aa5.78□□□□□ -1.48
USP39-219ENST00000496047 CAMLGP49069 296 aa5.78□□□□□ -1.48
USP39-219ENST00000496047 TAS2R30P59541 319 aa5.78□□□□□ -1.48
USP39-219ENST00000496047 POLR2GP62487 172 aaKnown RBP eCLIP5.78□□□□□ -1.48
USP39-219ENST00000496047 Q3ZCU0 254 aa5.78□□□□□ -1.48
USP39-219ENST00000496047 MIDNQ504T8 468 aa5.78□□□□□ -1.48
USP39-219ENST00000496047 H2BFWTQ7Z2G1 175 aa5.78□□□□□ -1.48
USP39-219ENST00000496047 MRPL41Q8IXM3 137 aaKnown RBP5.78□□□□□ -1.48
USP39-219ENST00000496047 SPAG16Q8N0X2 631 aa5.78□□□□□ -1.48
USP39-219ENST00000496047 LILRB2Q8N423 598 aa5.78□□□□□ -1.48
USP39-219ENST00000496047 ZNF808Q8N4W9 903 aaPredicted RBP5.78□□□□□ -1.48
USP39-219ENST00000496047 CD177Q8N6Q3 437 aa5.78□□□□□ -1.48
USP39-219ENST00000496047 OR10A7Q8NGE5 316 aa5.78□□□□□ -1.48
USP39-219ENST00000496047 OR52L2PQ8NGH6 319 aa5.78□□□□□ -1.48
USP39-219ENST00000496047 OR13A1Q8NGR1 328 aa5.78□□□□□ -1.48
USP39-219ENST00000496047 SCGB1C1Q8TD33 95 aa5.78□□□□□ -1.48
USP39-219ENST00000496047 FAM222BQ8WU58 562 aa5.78□□□□□ -1.48
USP39-219ENST00000496047 RNASE6Q93091 150 aaKnown RBP5.78□□□□□ -1.48
USP39-219ENST00000496047 DMRTA2Q96SC8 542 aa5.78□□□□□ -1.48
USP39-219ENST00000496047 TSNAXQ99598 290 aaKnown RBP5.78□□□□□ -1.48
USP39-219ENST00000496047 AIFM2Q9BRQ8 373 aa5.78□□□□□ -1.48
USP39-219ENST00000496047 GINS3Q9BRX5 216 aa5.78□□□□□ -1.48
USP39-219ENST00000496047 PBDC1Q9BVG4 233 aa5.78□□□□□ -1.48
USP39-219ENST00000496047 GCM1Q9NP62 436 aa5.78□□□□□ -1.48
USP39-219ENST00000496047 PARP11Q9NR21 331 aa5.78□□□□□ -1.48
USP39-219ENST00000496047 CYTL1Q9NRR1 136 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms