RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 LINC01619G3V211 115 aa14.26□□□□□ -0.13
CLCNKA-207ENST00000495784 FCN1O00602 326 aa14.26□□□□□ -0.13
CLCNKA-207ENST00000495784 SLC17A2O00624 439 aa14.26□□□□□ -0.13
CLCNKA-207ENST00000495784 SAP30O75446 220 aa14.26□□□□□ -0.13
CLCNKA-207ENST00000495784 ARL6IP5O75915 188 aa14.26□□□□□ -0.13
CLCNKA-207ENST00000495784 CPEP16870 476 aa14.26□□□□□ -0.13
CLCNKA-207ENST00000495784 IRF3Q14653 427 aa14.26□□□□□ -0.13
CLCNKA-207ENST00000495784 TRAM1Q15629 374 aa14.26□□□□□ -0.13
CLCNKA-207ENST00000495784 ACTBL2Q562R1 376 aa14.26□□□□□ -0.13
CLCNKA-207ENST00000495784 PYHIN1Q6K0P9 492 aa14.26□□□□□ -0.13
CLCNKA-207ENST00000495784 PPP1R27Q86WC6 154 aa14.26□□□□□ -0.13
CLCNKA-207ENST00000495784 FAM89BQ8N5H3 189 aa14.26□□□□□ -0.13
CLCNKA-207ENST00000495784 DRAXINQ8NBI3 349 aaPredicted RBP14.26□□□□□ -0.13
CLCNKA-207ENST00000495784 CLCC1Q96S66 551 aa14.26□□□□□ -0.13
CLCNKA-207ENST00000495784 RNF5Q99942 180 aa14.26□□□□□ -0.13
CLCNKA-207ENST00000495784 TOLLIPQ9H0E2 274 aa14.26□□□□□ -0.13
CLCNKA-207ENST00000495784 METTL1Q9UBP6 276 aaKnown RBP14.26□□□□□ -0.13
CLCNKA-207ENST00000495784 ZNF221Q9UK13 617 aa14.26□□□□□ -0.13
CLCNKA-207ENST00000495784 HSF4Q9ULV5 492 aa14.26□□□□□ -0.13
CLCNKA-207ENST00000495784 TPRKBQ9Y3C4 175 aa14.26□□□□□ -0.13
CLCNKA-207ENST00000495784 AK6Q9Y3D8 172 aaKnown RBP14.26□□□□□ -0.13
CLCNKA-207ENST00000495784 LGALS1P09382 135 aaKnown RBP14.25□□□□□ -0.13
CLCNKA-207ENST00000495784 SCTP09683 121 aa14.25□□□□□ -0.13
CLCNKA-207ENST00000495784 CD40LGP29965 261 aa14.25□□□□□ -0.13
CLCNKA-207ENST00000495784 SLURP1P55000 103 aa14.25□□□□□ -0.13
CLCNKA-207ENST00000495784 RPS25P62851 125 aaKnown RBP14.25□□□□□ -0.13
CLCNKA-207ENST00000495784 CD200R1LQ6Q8B3 271 aa14.25□□□□□ -0.13
CLCNKA-207ENST00000495784 UNQ5815/PRO19632Q6UWF5 114 aa14.25□□□□□ -0.13
CLCNKA-207ENST00000495784 TMEM91Q6ZNR0 172 aa14.25□□□□□ -0.13
CLCNKA-207ENST00000495784 DLX4Q92988 240 aaPredicted RBP14.25□□□□□ -0.13
CLCNKA-207ENST00000495784 ARHGAP5-AS1Q96IT6 56 aa14.25□□□□□ -0.13
CLCNKA-207ENST00000495784 TSNAXQ99598 290 aaKnown RBP14.25□□□□□ -0.13
CLCNKA-207ENST00000495784 GFI1Q99684 422 aa14.25□□□□□ -0.13
CLCNKA-207ENST00000495784 FAM103A1Q9BTL3 118 aaKnown RBP14.25□□□□□ -0.13
CLCNKA-207ENST00000495784 Q9N2K0 584 aa14.25□□□□□ -0.13
CLCNKA-207ENST00000495784 GAB2Q9UQC2 676 aa14.25□□□□□ -0.13
CLCNKA-207ENST00000495784 NUBP2Q9Y5Y2 271 aa14.25□□□□□ -0.13
CLCNKA-207ENST00000495784 EGR2P11161 476 aaPredicted RBP14.24□□□□□ -0.13
CLCNKA-207ENST00000495784 PSMA1P25786 263 aaKnown RBP14.24□□□□□ -0.13
CLCNKA-207ENST00000495784 VEGFCP49767 419 aa14.24□□□□□ -0.13
CLCNKA-207ENST00000495784 TPBGQ13641 420 aa14.24□□□□□ -0.13
CLCNKA-207ENST00000495784 PSG5Q15238 335 aa14.24□□□□□ -0.13
CLCNKA-207ENST00000495784 ZNF562Q6V9R5 426 aa14.24□□□□□ -0.13
CLCNKA-207ENST00000495784 PTX4Q96A99 478 aa14.24□□□□□ -0.13
CLCNKA-207ENST00000495784 CMSS1Q9BQ75 279 aaKnown RBP14.24□□□□□ -0.13
CLCNKA-207ENST00000495784 IGHV4OR15-8A0A075B7B6 117 aa14.23□□□□□ -0.13
CLCNKA-207ENST00000495784 A0A087WW49 117 aa14.23□□□□□ -0.13
CLCNKA-207ENST00000495784 FOXI3A8MTJ6 420 aaPredicted RBP14.23□□□□□ -0.13
CLCNKA-207ENST00000495784 ANKRD65E5RJM6 399 aa14.23□□□□□ -0.13
CLCNKA-207ENST00000495784 RGS10O43665 173 aa14.23□□□□□ -0.13
CLCNKA-207ENST00000495784 SPDEFO95238 335 aa14.23□□□□□ -0.13
CLCNKA-207ENST00000495784 CA2P00918 260 aa14.23□□□□□ -0.13
CLCNKA-207ENST00000495784 IGHV3-11P01762 117 aa14.23□□□□□ -0.13
CLCNKA-207ENST00000495784 APOA2P02652 100 aa14.23□□□□□ -0.13
CLCNKA-207ENST00000495784 CALRP27797 417 aaKnown RBP14.23□□□□□ -0.13
CLCNKA-207ENST00000495784 RANBP1P43487 201 aa14.23□□□□□ -0.13
CLCNKA-207ENST00000495784 TMEM50BP56557 158 aa14.23□□□□□ -0.13
CLCNKA-207ENST00000495784 CLDN12P56749 244 aa14.23□□□□□ -0.13
CLCNKA-207ENST00000495784 TPPP2P59282 170 aa14.23□□□□□ -0.13
CLCNKA-207ENST00000495784 RPS16P62249 146 aaKnown RBP14.23□□□□□ -0.13
CLCNKA-207ENST00000495784 AKIRIN2Q53H80 203 aa14.23□□□□□ -0.13
CLCNKA-207ENST00000495784 LFNGQ8NES3 379 aa14.23□□□□□ -0.13
CLCNKA-207ENST00000495784 OR56B1Q8NGI3 324 aa14.23□□□□□ -0.13
CLCNKA-207ENST00000495784 ARPC1AQ92747 370 aa14.23□□□□□ -0.13
CLCNKA-207ENST00000495784 FLYWCH2Q96CP2 140 aaKnown RBP14.23□□□□□ -0.13
CLCNKA-207ENST00000495784 MS4A10Q96PG2 267 aa14.23□□□□□ -0.13
CLCNKA-207ENST00000495784 PECRQ9BY49 303 aa14.23□□□□□ -0.13
CLCNKA-207ENST00000495784 CCDC90BQ9GZT6 254 aa14.23□□□□□ -0.13
CLCNKA-207ENST00000495784 TRDCB7Z8K6 153 aa14.22□□□□□ -0.13
CLCNKA-207ENST00000495784 IGKV1-16P04430 117 aa14.22□□□□□ -0.13
CLCNKA-207ENST00000495784 HSPB1P04792 205 aaKnown RBP14.22□□□□□ -0.13
CLCNKA-207ENST00000495784 TFAP2AP05549 437 aa14.22□□□□□ -0.13
CLCNKA-207ENST00000495784 AQP4P55087 323 aa14.22□□□□□ -0.13
CLCNKA-207ENST00000495784 MRPS15P82914 257 aaKnown RBP14.22□□□□□ -0.13
CLCNKA-207ENST00000495784 MLLT11Q13015 90 aaPredicted RBP14.22□□□□□ -0.13
CLCNKA-207ENST00000495784 PDPNQ86YL7 162 aa14.22□□□□□ -0.13
CLCNKA-207ENST00000495784 ZNF383Q8NA42 475 aa14.22□□□□□ -0.13
CLCNKA-207ENST00000495784 OR6Q1Q8NGQ2 317 aa14.22□□□□□ -0.13
CLCNKA-207ENST00000495784 GRPEL2Q8TAA5 225 aa14.22□□□□□ -0.13
CLCNKA-207ENST00000495784 FAM3DQ96BQ1 224 aa14.22□□□□□ -0.13
CLCNKA-207ENST00000495784 DUSP21Q9H596 190 aa14.22□□□□□ -0.13
CLCNKA-207ENST00000495784 SLA2Q9H6Q3 261 aa14.22□□□□□ -0.13
CLCNKA-207ENST00000495784 TPSG1Q9NRR2 321 aa14.22□□□□□ -0.13
CLCNKA-207ENST00000495784 RDH8Q9NYR8 311 aa14.22□□□□□ -0.13
CLCNKA-207ENST00000495784 RYR3Q15413 4870 aa14.22□□□□□ -0.13
CLCNKA-207ENST00000495784 M0R1X1 148 aa14.21□□□□□ -0.13
CLCNKA-207ENST00000495784 PROP1O75360 226 aa14.21□□□□□ -0.13
CLCNKA-207ENST00000495784 OR8U9P0C7N5 309 aa14.21□□□□□ -0.13
CLCNKA-207ENST00000495784 SPNP16150 400 aa14.21□□□□□ -0.13
CLCNKA-207ENST00000495784 SERPINB10P48595 397 aa14.21□□□□□ -0.13
CLCNKA-207ENST00000495784 PSMD7P51665 324 aa14.21□□□□□ -0.13
CLCNKA-207ENST00000495784 LINC00205P59089 165 aa14.21□□□□□ -0.13
CLCNKA-207ENST00000495784 PITPNAQ00169 270 aa14.21□□□□□ -0.13
CLCNKA-207ENST00000495784 C2orf76Q3KRA6 126 aa14.21□□□□□ -0.13
CLCNKA-207ENST00000495784 ACSM6Q6P461 480 aa14.21□□□□□ -0.13
CLCNKA-207ENST00000495784 OR4C12Q96R67 309 aa14.21□□□□□ -0.13
CLCNKA-207ENST00000495784 NKX1-2Q9UD57 310 aaPredicted RBP14.21□□□□□ -0.13
CLCNKA-207ENST00000495784 V9GY05 133 aa14.21□□□□□ -0.13
CLCNKA-207ENST00000495784 SORL1Q92673 2214 aa14.21□□□□□ -0.14
CLCNKA-207ENST00000495784 IGKV1-6A0A0C4DH72 117 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms