RNA–Protein interactions for RNA: ENST00000495039.1

VPS50-219, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-219ENST00000495039 SERPINB10P48595 397 aa1.07□□□□□ -2.24
VPS50-219ENST00000495039 ERHP84090 104 aaKnown RBP1.07□□□□□ -2.24
VPS50-219ENST00000495039 ZNF90Q03938 601 aa1.07□□□□□ -2.24
VPS50-219ENST00000495039 ZNHIT3Q15649 155 aaPredicted RBP1.07□□□□□ -2.24
VPS50-219ENST00000495039 MESTQ5EB52 335 aa1.07□□□□□ -2.24
VPS50-219ENST00000495039 SPATA31B1PQ5VZV4 182 aa1.07□□□□□ -2.24
VPS50-219ENST00000495039 AMTNQ6UX39 209 aa1.07□□□□□ -2.24
VPS50-219ENST00000495039 Q6ZSA8 131 aa1.07□□□□□ -2.24
VPS50-219ENST00000495039 ATP5L2Q7Z4Y8 100 aa1.07□□□□□ -2.24
VPS50-219ENST00000495039 BLIDQ8IZY5 108 aa1.07□□□□□ -2.24
VPS50-219ENST00000495039 SYCE1Q8N0S2 351 aa1.07□□□□□ -2.24
VPS50-219ENST00000495039 C10orf126Q8N4M7 172 aa1.07□□□□□ -2.24
VPS50-219ENST00000495039 OR2D3Q8NGH3 330 aa1.07□□□□□ -2.24
VPS50-219ENST00000495039 OR52E4Q8NGH9 312 aa1.07□□□□□ -2.24
VPS50-219ENST00000495039 OR11H2Q8NH07 326 aa1.07□□□□□ -2.24
VPS50-219ENST00000495039 LRRC45Q96CN5 670 aa1.07□□□□□ -2.24
VPS50-219ENST00000495039 TLCD1Q96CP7 247 aa1.07□□□□□ -2.24
VPS50-219ENST00000495039 OR7D2Q96RA2 312 aa1.07□□□□□ -2.24
VPS50-219ENST00000495039 TIMM21Q9BVV7 248 aa1.07□□□□□ -2.24
VPS50-219ENST00000495039 GNB1LQ9BYB4 327 aa1.07□□□□□ -2.24
VPS50-219ENST00000495039 OR52A5Q9H2C5 316 aa1.07□□□□□ -2.24
VPS50-219ENST00000495039 MS4A12Q9NXJ0 267 aa1.07□□□□□ -2.24
VPS50-219ENST00000495039 PRO2289Q9P1D8 64 aa1.07□□□□□ -2.24
VPS50-219ENST00000495039 AMMECR1Q9Y4X0 333 aaPredicted RBP1.07□□□□□ -2.24
VPS50-219ENST00000495039 NPATQ14207 1427 aa1.06□□□□□ -2.24
VPS50-219ENST00000495039 MDC1Q14676 2089 aaKnown RBP1.06□□□□□ -2.24
VPS50-219ENST00000495039 MKRN2OSH3BPM6 223 aa1.06□□□□□ -2.24
VPS50-219ENST00000495039 IGHV1-69P01742 117 aa1.06□□□□□ -2.24
VPS50-219ENST00000495039 RD3LP0DJH9 198 aa1.06□□□□□ -2.24
VPS50-219ENST00000495039 CA7P43166 264 aa1.06□□□□□ -2.24
VPS50-219ENST00000495039 XCL1P47992 114 aa1.06□□□□□ -2.24
VPS50-219ENST00000495039 RPL14P50914 215 aaKnown RBP1.06□□□□□ -2.24
VPS50-219ENST00000495039 DAPP51397 102 aa1.06□□□□□ -2.24
VPS50-219ENST00000495039 RAP1GDS1P52306 607 aa1.06□□□□□ -2.24
VPS50-219ENST00000495039 H2BFSP57053 126 aa1.06□□□□□ -2.24
VPS50-219ENST00000495039 HERVK_113P63121 156 aa1.06□□□□□ -2.24
VPS50-219ENST00000495039 SLAMF1Q13291 335 aa1.06□□□□□ -2.24
VPS50-219ENST00000495039 HSP90B2PQ58FF3 399 aa1.06□□□□□ -2.24
VPS50-219ENST00000495039 FAM45BPQ6NSW5 357 aa1.06□□□□□ -2.24
VPS50-219ENST00000495039 Q6ZTI0 123 aa1.06□□□□□ -2.24
VPS50-219ENST00000495039 LHFPL1Q86WI0 220 aa1.06□□□□□ -2.24
VPS50-219ENST00000495039 CNEP1R1Q8N9A8 125 aa1.06□□□□□ -2.24
VPS50-219ENST00000495039 STOML3Q8TAV4 291 aa1.06□□□□□ -2.24
VPS50-219ENST00000495039 NKX6-2Q9C056 277 aaPredicted RBP1.06□□□□□ -2.24
VPS50-219ENST00000495039 SYNRGQ9UMZ2 1314 aa1.06□□□□□ -2.24
VPS50-219ENST00000495039 A0A1B0GVG6 124 aa1.05□□□□□ -2.24
VPS50-219ENST00000495039 ERICH2A1L162 156 aa1.05□□□□□ -2.24
VPS50-219ENST00000495039 F8VZ95 297 aa1.05□□□□□ -2.24
VPS50-219ENST00000495039 GOLGA8RI6L899 631 aa1.05□□□□□ -2.24
VPS50-219ENST00000495039 MRASO14807 208 aa1.05□□□□□ -2.24
VPS50-219ENST00000495039 ZNF728P0DKX0 622 aa1.05□□□□□ -2.24
VPS50-219ENST00000495039 OR10J1P30954 320 aa1.05□□□□□ -2.24
VPS50-219ENST00000495039 BTN3A2P78410 334 aa1.05□□□□□ -2.24
VPS50-219ENST00000495039 PABPC1L2AQ5JQF8 200 aa1.05□□□□□ -2.24
VPS50-219ENST00000495039 LCN8Q6JVE9 175 aa1.05□□□□□ -2.24
VPS50-219ENST00000495039 SLC35E3Q7Z769 313 aa1.05□□□□□ -2.24
VPS50-219ENST00000495039 BOD1L2Q8IYS8 172 aa1.05□□□□□ -2.24
VPS50-219ENST00000495039 OR5J2Q8NH18 312 aa1.05□□□□□ -2.24
VPS50-219ENST00000495039 RBP7Q96R05 134 aa1.05□□□□□ -2.24
VPS50-219ENST00000495039 SPZ1Q9BXG8 430 aa1.05□□□□□ -2.24
VPS50-219ENST00000495039 OR51B6Q9H340 312 aa1.05□□□□□ -2.24
VPS50-219ENST00000495039 SLC2A9Q9NRM0 540 aa1.05□□□□□ -2.24
VPS50-219ENST00000495039 PARVAQ9NVD7 372 aa1.05□□□□□ -2.24
VPS50-219ENST00000495039 FAM215AQ9Y5M1 114 aa1.05□□□□□ -2.24
VPS50-219ENST00000495039 TMEM94Q12767 1356 aa1.05□□□□□ -2.24
VPS50-219ENST00000495039 TRGV2A0A075B6R0 118 aa1.04□□□□□ -2.24
VPS50-219ENST00000495039 TRAV8-1A0A0A6YYK1 113 aa1.04□□□□□ -2.24
VPS50-219ENST00000495039 TRAV41A0A0B4J266 112 aa1.04□□□□□ -2.24
VPS50-219ENST00000495039 MDFIC2A0A1B0GVS7 189 aa1.04□□□□□ -2.24
VPS50-219ENST00000495039 METTL15A6NJ78 407 aa1.04□□□□□ -2.24
VPS50-219ENST00000495039 HSBP1L1C9JCN9 74 aa1.04□□□□□ -2.24
VPS50-219ENST00000495039 SMLR1H3BR10 107 aa1.04□□□□□ -2.24
VPS50-219ENST00000495039 ATP6V1G2O95670 118 aa1.04□□□□□ -2.24
VPS50-219ENST00000495039 LINC00614P0C842 121 aa1.04□□□□□ -2.24
VPS50-219ENST00000495039 GRPRP30550 384 aa1.04□□□□□ -2.24
VPS50-219ENST00000495039 CDK9P50750 372 aaKnown RBP1.04□□□□□ -2.24
VPS50-219ENST00000495039 EMP2P54851 167 aa1.04□□□□□ -2.24
VPS50-219ENST00000495039 TAS2R30P59541 319 aa1.04□□□□□ -2.24
VPS50-219ENST00000495039 GNA12Q03113 381 aa1.04□□□□□ -2.24
VPS50-219ENST00000495039 RELAQ04206 551 aa1.04□□□□□ -2.24
VPS50-219ENST00000495039 SMAGPQ0VAQ4 97 aa1.04□□□□□ -2.24
VPS50-219ENST00000495039 TMEM267Q0VDI3 215 aaPredicted RBP1.04□□□□□ -2.24
VPS50-219ENST00000495039 PMS2P3Q13401 168 aa1.04□□□□□ -2.24
VPS50-219ENST00000495039 DNAL1Q4LDG9 190 aa1.04□□□□□ -2.24
VPS50-219ENST00000495039 Q6ZRN7 208 aaPredicted RBP1.04□□□□□ -2.24
VPS50-219ENST00000495039 BAP18Q8IXM2 172 aa1.04□□□□□ -2.24
VPS50-219ENST00000495039 RPS4Y2Q8TD47 263 aa1.04□□□□□ -2.24
VPS50-219ENST00000495039 CYGBQ8WWM9 190 aa1.04□□□□□ -2.24
VPS50-219ENST00000495039 SLC35G5Q96KT7 338 aa1.04□□□□□ -2.24
VPS50-219ENST00000495039 MRPL32Q9BYC8 188 aaKnown RBP1.04□□□□□ -2.24
VPS50-219ENST00000495039 EMC3Q9P0I2 261 aa1.04□□□□□ -2.24
VPS50-219ENST00000495039 DOK5Q9P104 306 aa1.04□□□□□ -2.24
VPS50-219ENST00000495039 ZNF532Q9HCE3 1301 aa1.04□□□□□ -2.24
VPS50-219ENST00000495039 THSD7AQ9UPZ6 1657 aa1.04□□□□□ -2.24
VPS50-219ENST00000495039 WDR90Q96KV7 1748 aa1.03□□□□□ -2.24
VPS50-219ENST00000495039 TRGV5A0A0B4J1U4 118 aa1.03□□□□□ -2.24
VPS50-219ENST00000495039 A0A1W2PQD3 144 aa1.03□□□□□ -2.24
VPS50-219ENST00000495039 RFPL4AA6NLU0 287 aa1.03□□□□□ -2.24
VPS50-219ENST00000495039 TRPC5OSA6NMA1 111 aa1.03□□□□□ -2.24
VPS50-219ENST00000495039 IQCF5A8MTL0 148 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms