RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 CD37P11049 281 aa17.01■□□□□ 0.31
HDDC3-203ENST00000494993 SRMP19623 302 aa17.01■□□□□ 0.31
HDDC3-203ENST00000494993 HLA-DRB3P79483 266 aa17.01■□□□□ 0.31
HDDC3-203ENST00000494993 PITPNAQ00169 270 aa17.01■□□□□ 0.31
HDDC3-203ENST00000494993 CASC10Q5T4H9 136 aa17.01■□□□□ 0.31
HDDC3-203ENST00000494993 EDARADDQ8WWZ3 215 aa17.01■□□□□ 0.31
HDDC3-203ENST00000494993 FLYWCH2Q96CP2 140 aaKnown RBP17.01■□□□□ 0.31
HDDC3-203ENST00000494993 CLCC1Q96S66 551 aa17.01■□□□□ 0.31
HDDC3-203ENST00000494993 MND1Q9BWT6 205 aa17.01■□□□□ 0.31
HDDC3-203ENST00000494993 C11orf54Q9H0W9 315 aaPredicted RBP17.01■□□□□ 0.31
HDDC3-203ENST00000494993 OR1A1Q9P1Q5 309 aa17.01■□□□□ 0.31
HDDC3-203ENST00000494993 METTL1Q9UBP6 276 aaKnown RBP17.01■□□□□ 0.31
HDDC3-203ENST00000494993 RYR2Q92736 4967 aa17.01■□□□□ 0.31
HDDC3-203ENST00000494993 TRIM64CA6NLI5 447 aa17■□□□□ 0.31
HDDC3-203ENST00000494993 HSPB1P04792 205 aaKnown RBP17■□□□□ 0.31
HDDC3-203ENST00000494993 TPPP2P59282 170 aa17■□□□□ 0.31
HDDC3-203ENST00000494993 PSG5Q15238 335 aa17■□□□□ 0.31
HDDC3-203ENST00000494993 RCN1Q15293 331 aa17■□□□□ 0.31
HDDC3-203ENST00000494993 HSD17B12Q53GQ0 312 aa17■□□□□ 0.31
HDDC3-203ENST00000494993 RNLSQ5VYX0 342 aa17■□□□□ 0.31
HDDC3-203ENST00000494993 ZNF562Q6V9R5 426 aa17■□□□□ 0.31
HDDC3-203ENST00000494993 LFNGQ8NES3 379 aa17■□□□□ 0.31
HDDC3-203ENST00000494993 OR6M1Q8NGM8 313 aa17■□□□□ 0.31
HDDC3-203ENST00000494993 RHOVQ96L33 236 aa17■□□□□ 0.31
HDDC3-203ENST00000494993 MS4A10Q96PG2 267 aa17■□□□□ 0.31
HDDC3-203ENST00000494993 HDHD3Q9BSH5 251 aaPredicted RBP17■□□□□ 0.31
HDDC3-203ENST00000494993 LPAR5Q9H1C0 372 aa17■□□□□ 0.31
HDDC3-203ENST00000494993 AK3Q9UIJ7 227 aa17■□□□□ 0.31
HDDC3-203ENST00000494993 SOCS1O15524 211 aa16.99■□□□□ 0.31
HDDC3-203ENST00000494993 HSPA12AO43301 675 aa16.99■□□□□ 0.31
HDDC3-203ENST00000494993 CA2P00918 260 aa16.99■□□□□ 0.31
HDDC3-203ENST00000494993 CDK1P06493 297 aa16.99■□□□□ 0.31
HDDC3-203ENST00000494993 SNRPBP14678 240 aaKnown RBP16.99■□□□□ 0.31
HDDC3-203ENST00000494993 ZBTB25P24278 435 aa16.99■□□□□ 0.31
HDDC3-203ENST00000494993 CEACAM6P40199 344 aa16.99■□□□□ 0.31
HDDC3-203ENST00000494993 CEACAM19Q7Z692 300 aa16.99■□□□□ 0.31
HDDC3-203ENST00000494993 OR4C12Q96R67 309 aa16.99■□□□□ 0.31
HDDC3-203ENST00000494993 SLA2Q9H6Q3 261 aa16.99■□□□□ 0.31
HDDC3-203ENST00000494993 ZMAT4Q9H898 229 aa16.99■□□□□ 0.31
HDDC3-203ENST00000494993 MGAT4AQ9UM21 535 aa16.99■□□□□ 0.31
HDDC3-203ENST00000494993 PROP1O75360 226 aa16.98■□□□□ 0.31
HDDC3-203ENST00000494993 SPDEFO95238 335 aa16.98■□□□□ 0.31
HDDC3-203ENST00000494993 TFAP2AP05549 437 aa16.98■□□□□ 0.31
HDDC3-203ENST00000494993 UCHL1P09936 223 aa16.98■□□□□ 0.31
HDDC3-203ENST00000494993 CPEP16870 476 aa16.98■□□□□ 0.31
HDDC3-203ENST00000494993 CD40LGP29965 261 aa16.98■□□□□ 0.31
HDDC3-203ENST00000494993 OGFRL1Q5TC84 451 aaPredicted RBP16.98■□□□□ 0.31
HDDC3-203ENST00000494993 DRAXINQ8NBI3 349 aaPredicted RBP16.98■□□□□ 0.31
HDDC3-203ENST00000494993 TSNAXQ99598 290 aaKnown RBP16.98■□□□□ 0.31
HDDC3-203ENST00000494993 URM1Q9BTM9 101 aaKnown RBP16.98■□□□□ 0.31
HDDC3-203ENST00000494993 LSM2Q9Y333 95 aaKnown RBP16.98■□□□□ 0.31
HDDC3-203ENST00000494993 ARPC1BO15143 372 aaKnown RBP16.97■□□□□ 0.31
HDDC3-203ENST00000494993 IGKV1-16P04430 117 aa16.97■□□□□ 0.31
HDDC3-203ENST00000494993 SCTP09683 121 aa16.97■□□□□ 0.31
HDDC3-203ENST00000494993 SPHARQ15513 63 aa16.97■□□□□ 0.31
HDDC3-203ENST00000494993 SRSF7Q16629 238 aaKnown RBP eCLIP16.97■□□□□ 0.31
HDDC3-203ENST00000494993 FAM89BQ8N5H3 189 aa16.97■□□□□ 0.31
HDDC3-203ENST00000494993 PTX4Q96A99 478 aa16.97■□□□□ 0.31
HDDC3-203ENST00000494993 Q9N2K0 584 aa16.97■□□□□ 0.31
HDDC3-203ENST00000494993 HSF4Q9ULV5 492 aa16.97■□□□□ 0.31
HDDC3-203ENST00000494993 TENM2Q9NT68 2774 aa16.96■□□□□ 0.31
HDDC3-203ENST00000494993 SACSQ9NZJ4 4579 aa16.96■□□□□ 0.31
HDDC3-203ENST00000494993 FOXI3A8MTJ6 420 aaPredicted RBP16.96■□□□□ 0.31
HDDC3-203ENST00000494993 TRGV3P03979 118 aa16.96■□□□□ 0.31
HDDC3-203ENST00000494993 RPS16P62249 146 aaKnown RBP16.96■□□□□ 0.31
HDDC3-203ENST00000494993 P2RY14Q15391 338 aa16.96■□□□□ 0.31
HDDC3-203ENST00000494993 HAPLN4Q86UW8 402 aa16.96■□□□□ 0.31
HDDC3-203ENST00000494993 PDPNQ86YL7 162 aa16.96■□□□□ 0.31
HDDC3-203ENST00000494993 ZNF383Q8NA42 475 aa16.96■□□□□ 0.31
HDDC3-203ENST00000494993 GFI1Q99684 422 aa16.96■□□□□ 0.31
HDDC3-203ENST00000494993 ELOVL1Q9BW60 279 aa16.96■□□□□ 0.31
HDDC3-203ENST00000494993 C12orf4Q9NQ89 552 aa16.96■□□□□ 0.31
HDDC3-203ENST00000494993 ZNF221Q9UK13 617 aa16.96■□□□□ 0.31
HDDC3-203ENST00000494993 TNCP24821 2201 aa16.95■□□□□ 0.3
HDDC3-203ENST00000494993 PTGES3LE9PB15 166 aa16.95■□□□□ 0.3
HDDC3-203ENST00000494993 SLC17A2O00624 439 aa16.95■□□□□ 0.3
HDDC3-203ENST00000494993 CASQ2O14958 399 aaPredicted RBP16.95■□□□□ 0.3
HDDC3-203ENST00000494993 ARSBP15848 533 aa16.95■□□□□ 0.3
HDDC3-203ENST00000494993 LINC00205P59089 165 aa16.95■□□□□ 0.3
HDDC3-203ENST00000494993 MED22Q15528 200 aa16.95■□□□□ 0.3
HDDC3-203ENST00000494993 GRPEL2Q8TAA5 225 aa16.95■□□□□ 0.3
HDDC3-203ENST00000494993 PLGRKTQ9HBL7 147 aa16.95■□□□□ 0.3
HDDC3-203ENST00000494993 STUB1Q9UNE7 303 aa16.95■□□□□ 0.3
HDDC3-203ENST00000494993 SLC25A17O43808 307 aa16.94■□□□□ 0.3
HDDC3-203ENST00000494993 APOA2P02652 100 aa16.94■□□□□ 0.3
HDDC3-203ENST00000494993 TMEM50BP56557 158 aa16.94■□□□□ 0.3
HDDC3-203ENST00000494993 FXYD3Q14802 87 aa16.94■□□□□ 0.3
HDDC3-203ENST00000494993 ZNF355PQ9NSJ1 428 aa16.94■□□□□ 0.3
HDDC3-203ENST00000494993 IGKV1-6A0A0C4DH72 117 aa16.93■□□□□ 0.3
HDDC3-203ENST00000494993 H3BUA1 57 aa16.93■□□□□ 0.3
HDDC3-203ENST00000494993 IGLV1-51P01701 117 aa16.93■□□□□ 0.3
HDDC3-203ENST00000494993 LYL1P12980 280 aa16.93■□□□□ 0.3
HDDC3-203ENST00000494993 LIPKQ5VXJ0 399 aa16.93■□□□□ 0.3
HDDC3-203ENST00000494993 POC5Q8NA72 575 aa16.93■□□□□ 0.3
HDDC3-203ENST00000494993 UFD1Q92890 307 aa16.93■□□□□ 0.3
HDDC3-203ENST00000494993 TMEM203Q969S6 136 aa16.93■□□□□ 0.3
HDDC3-203ENST00000494993 ARHGAP5-AS1Q96IT6 56 aa16.93■□□□□ 0.3
HDDC3-203ENST00000494993 CITED4Q96RK1 184 aa16.93■□□□□ 0.3
HDDC3-203ENST00000494993 LYSTQ99698 3801 aa16.93■□□□□ 0.3
HDDC3-203ENST00000494993 CMSS1Q9BQ75 279 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms