RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 XKP51811 444 aa2.25□□□□□ -2.05
SMC4-224ENST00000494612 CCL7P80098 99 aa2.25□□□□□ -2.05
SMC4-224ENST00000494612 ATP5G2Q06055 141 aa2.25□□□□□ -2.05
SMC4-224ENST00000494612 TRAM1Q15629 374 aa2.25□□□□□ -2.05
SMC4-224ENST00000494612 TRIP13Q15645 432 aaPredicted RBP2.25□□□□□ -2.05
SMC4-224ENST00000494612 DEFB109BQ30KR1 87 aa2.25□□□□□ -2.05
SMC4-224ENST00000494612 KRTAP21-3Q3LHN1 58 aa2.25□□□□□ -2.05
SMC4-224ENST00000494612 CDNFQ49AH0 187 aa2.25□□□□□ -2.05
SMC4-224ENST00000494612 SYT6Q5T7P8 510 aaPredicted RBP2.25□□□□□ -2.05
SMC4-224ENST00000494612 CRYBG3Q68DQ2 2970 aa2.25□□□□□ -2.05
SMC4-224ENST00000494612 HBMQ6B0K9 141 aa2.25□□□□□ -2.05
SMC4-224ENST00000494612 MORN3Q6PF18 240 aaPredicted RBP2.25□□□□□ -2.05
SMC4-224ENST00000494612 BRD3OSQ6XYD6 125 aa2.25□□□□□ -2.05
SMC4-224ENST00000494612 CLEC20AQ6ZU45 233 aa2.25□□□□□ -2.05
SMC4-224ENST00000494612 SSX7Q7RTT5 188 aa2.25□□□□□ -2.05
SMC4-224ENST00000494612 C12orf29Q8N999 325 aa2.25□□□□□ -2.05
SMC4-224ENST00000494612 ZNF738Q8NE65 137 aa2.25□□□□□ -2.05
SMC4-224ENST00000494612 CCDC112Q8NEF3 446 aa2.25□□□□□ -2.05
SMC4-224ENST00000494612 OR4K2Q8NGD2 314 aa2.25□□□□□ -2.05
SMC4-224ENST00000494612 FAM57AQ8TBR7 257 aa2.25□□□□□ -2.05
SMC4-224ENST00000494612 WFDC5Q8TCV5 224 aa2.25□□□□□ -2.05
SMC4-224ENST00000494612 OR5P2Q8WZ92 322 aa2.25□□□□□ -2.05
SMC4-224ENST00000494612 ZNF514Q96K75 400 aaPredicted RBP2.25□□□□□ -2.05
SMC4-224ENST00000494612 METTL26Q96S19 204 aa2.25□□□□□ -2.05
SMC4-224ENST00000494612 DRC3Q9H069 523 aa2.25□□□□□ -2.05
SMC4-224ENST00000494612 HDHD2Q9H0R4 259 aa2.25□□□□□ -2.05
SMC4-224ENST00000494612 NLE1Q9NVX2 485 aaPredicted RBP2.25□□□□□ -2.05
SMC4-224ENST00000494612 HMGXB4Q9UGU5 601 aa2.25□□□□□ -2.05
SMC4-224ENST00000494612 ANXA10Q9UJ72 324 aa2.25□□□□□ -2.05
SMC4-224ENST00000494612 SLC7A11Q9UPY5 501 aa2.25□□□□□ -2.05
SMC4-224ENST00000494612 SCN8AQ9UQD0 1980 aa2.24□□□□□ -2.05
SMC4-224ENST00000494612 SPTY2D1-AS1A0A0U1RR47 76 aa2.24□□□□□ -2.05
SMC4-224ENST00000494612 FABP12A6NFH5 140 aa2.24□□□□□ -2.05
SMC4-224ENST00000494612 C10orf142B7Z368 130 aa2.24□□□□□ -2.05
SMC4-224ENST00000494612 TCAPO15273 167 aa2.24□□□□□ -2.05
SMC4-224ENST00000494612 ZW10O43264 779 aa2.24□□□□□ -2.05
SMC4-224ENST00000494612 SHOX2O60902 331 aaPredicted RBP2.24□□□□□ -2.05
SMC4-224ENST00000494612 BRI3O95415 125 aa2.24□□□□□ -2.05
SMC4-224ENST00000494612 CXorf1O96002 111 aa2.24□□□□□ -2.05
SMC4-224ENST00000494612 CDK1P06493 297 aa2.24□□□□□ -2.05
SMC4-224ENST00000494612 CTSEP14091 401 aa2.24□□□□□ -2.05
SMC4-224ENST00000494612 TGM4P49221 684 aa2.24□□□□□ -2.05
SMC4-224ENST00000494612 PLTPP55058 493 aa2.24□□□□□ -2.05
SMC4-224ENST00000494612 AQP5P55064 265 aa2.24□□□□□ -2.05
SMC4-224ENST00000494612 RPS24P62847 133 aaKnown RBP2.24□□□□□ -2.05
SMC4-224ENST00000494612 FLI1Q01543 452 aaPredicted RBP2.24□□□□□ -2.05
SMC4-224ENST00000494612 RAB31Q13636 194 aa2.24□□□□□ -2.05
SMC4-224ENST00000494612 ELOCQ15369 112 aa2.24□□□□□ -2.05
SMC4-224ENST00000494612 FBXL19-AS1Q494R0 122 aa2.24□□□□□ -2.05
SMC4-224ENST00000494612 IDNKQ5T6J7 187 aa2.24□□□□□ -2.05
SMC4-224ENST00000494612 CYP4Z2PQ8N1L4 340 aa2.24□□□□□ -2.05
SMC4-224ENST00000494612 CCNYL1Q8N7R7 359 aa2.24□□□□□ -2.05
SMC4-224ENST00000494612 OR2Y1Q8NGV0 311 aa2.24□□□□□ -2.05
SMC4-224ENST00000494612 OR51Q1Q8NH59 317 aa2.24□□□□□ -2.05
SMC4-224ENST00000494612 ORAOV1Q8WV07 137 aa2.24□□□□□ -2.05
SMC4-224ENST00000494612 ITLN2Q8WWU7 325 aaPredicted RBP2.24□□□□□ -2.05
SMC4-224ENST00000494612 C22orf15Q8WYQ4 148 aa2.24□□□□□ -2.05
SMC4-224ENST00000494612 ZMYND19Q96E35 227 aaPredicted RBP2.24□□□□□ -2.05
SMC4-224ENST00000494612 ZNF251Q9BRH9 671 aa2.24□□□□□ -2.05
SMC4-224ENST00000494612 DCUN1D5Q9BTE7 237 aa2.24□□□□□ -2.05
SMC4-224ENST00000494612 ULBP1Q9BZM6 244 aa2.24□□□□□ -2.05
SMC4-224ENST00000494612 DSN1Q9H410 356 aa2.24□□□□□ -2.05
SMC4-224ENST00000494612 VSIRQ9H7M9 311 aa2.24□□□□□ -2.05
SMC4-224ENST00000494612 DNAJC27Q9NZQ0 273 aa2.24□□□□□ -2.05
SMC4-224ENST00000494612 PRO0628Q9UI54 55 aa2.24□□□□□ -2.05
SMC4-224ENST00000494612 STOML2Q9UJZ1 356 aa2.24□□□□□ -2.05
SMC4-224ENST00000494612 SNX24Q9Y343 169 aa2.24□□□□□ -2.05
SMC4-224ENST00000494612 SLC22A7Q9Y694 548 aa2.24□□□□□ -2.05
SMC4-224ENST00000494612 ANKRD17O75179 2603 aaKnown RBP2.24□□□□□ -2.05
SMC4-224ENST00000494612 ZNF106Q9H2Y7 1883 aaKnown RBP2.24□□□□□ -2.05
SMC4-224ENST00000494612 AHCTF1Q8WYP5 2266 aa2.24□□□□□ -2.05
SMC4-224ENST00000494612 CELSR2Q9HCU4 2923 aa2.24□□□□□ -2.05
SMC4-224ENST00000494612 CACNA1DQ01668 2161 aa2.23□□□□□ -2.05
SMC4-224ENST00000494612 FLNCQ14315 2725 aa2.23□□□□□ -2.05
SMC4-224ENST00000494612 ZFHX3Q15911 3703 aa2.23□□□□□ -2.05
SMC4-224ENST00000494612 F5H5T6 163 aa2.23□□□□□ -2.05
SMC4-224ENST00000494612 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.23□□□□□ -2.05
SMC4-224ENST00000494612 H3BQV1 296 aa2.23□□□□□ -2.05
SMC4-224ENST00000494612 NIPSNAP2O75323 286 aa2.23□□□□□ -2.05
SMC4-224ENST00000494612 MYO1DO94832 1006 aa2.23□□□□□ -2.05
SMC4-224ENST00000494612 KLHL2O95198 593 aa2.23□□□□□ -2.05
SMC4-224ENST00000494612 CD8AP01732 235 aa2.23□□□□□ -2.05
SMC4-224ENST00000494612 APOEP02649 317 aa2.23□□□□□ -2.05
SMC4-224ENST00000494612 OR5AC1P0C628 307 aa2.23□□□□□ -2.05
SMC4-224ENST00000494612 CCL4P13236 92 aa2.23□□□□□ -2.05
SMC4-224ENST00000494612 HLA-DMAP28067 261 aa2.23□□□□□ -2.05
SMC4-224ENST00000494612 PSMB6P28072 239 aa2.23□□□□□ -2.05
SMC4-224ENST00000494612 RPA3P35244 121 aaPredicted RBP2.23□□□□□ -2.05
SMC4-224ENST00000494612 FMODQ06828 376 aa2.23□□□□□ -2.05
SMC4-224ENST00000494612 SLAMF1Q13291 335 aa2.23□□□□□ -2.05
SMC4-224ENST00000494612 GOLGA7BQ2TAP0 167 aa2.23□□□□□ -2.05
SMC4-224ENST00000494612 OR10J3Q5JRS4 329 aa2.23□□□□□ -2.05
SMC4-224ENST00000494612 RBM48Q5RL73 367 aaKnown RBP2.23□□□□□ -2.05
SMC4-224ENST00000494612 TMEM69Q5SWH9 247 aa2.23□□□□□ -2.05
SMC4-224ENST00000494612 CCDC122Q5T0U0 273 aa2.23□□□□□ -2.05
SMC4-224ENST00000494612 SPOPLQ6IQ16 392 aa2.23□□□□□ -2.05
SMC4-224ENST00000494612 UGT2A3Q6UWM9 527 aa2.23□□□□□ -2.05
SMC4-224ENST00000494612 CLEC19AQ6UXS0 136 aa2.23□□□□□ -2.05
SMC4-224ENST00000494612 PLEKHG7Q6ZR37 379 aa2.23□□□□□ -2.05
SMC4-224ENST00000494612 Q6ZT83 130 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms