RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 SDHAF2Q9NX18 166 aa16.9■□□□□ 0.3
KPNA1-210ENST00000494339 ONECUT1Q9UBC0 465 aa16.9■□□□□ 0.3
KPNA1-210ENST00000494339 C17orf98A8MV24 154 aa16.89■□□□□ 0.29
KPNA1-210ENST00000494339 HOXB5P09067 269 aa16.89■□□□□ 0.29
KPNA1-210ENST00000494339 SLC25A4P12235 298 aa16.89■□□□□ 0.29
KPNA1-210ENST00000494339 GPR12P47775 334 aa16.89■□□□□ 0.29
KPNA1-210ENST00000494339 DLX1P56177 255 aa16.89■□□□□ 0.29
KPNA1-210ENST00000494339 Q3ZCU0 254 aa16.89■□□□□ 0.29
KPNA1-210ENST00000494339 ZNRD1Q9P1U0 126 aa16.89■□□□□ 0.29
KPNA1-210ENST00000494339 ASH1LQ9NR48 2969 aaKnown RBP16.89■□□□□ 0.29
KPNA1-210ENST00000494339 APCP25054 2843 aa16.89■□□□□ 0.29
KPNA1-210ENST00000494339 FXYD6-FXYD2A0A087WZ82 144 aa16.88■□□□□ 0.29
KPNA1-210ENST00000494339 TRAV14DV4A0A0A6YYC5 116 aa16.88■□□□□ 0.29
KPNA1-210ENST00000494339 PIGBOS1A0A0B4J2F0 54 aa16.88■□□□□ 0.29
KPNA1-210ENST00000494339 IGHV4-61A0A0C4DH41 118 aa16.88■□□□□ 0.29
KPNA1-210ENST00000494339 KIAA1324LA8MWY0 1029 aaPredicted RBP16.88■□□□□ 0.29
KPNA1-210ENST00000494339 VWC2LB2RUY7 222 aa16.88■□□□□ 0.29
KPNA1-210ENST00000494339 RAB7AP51149 207 aa16.88■□□□□ 0.29
KPNA1-210ENST00000494339 LCN2P80188 198 aa16.88■□□□□ 0.29
KPNA1-210ENST00000494339 TMEM65Q6PI78 240 aa16.88■□□□□ 0.29
KPNA1-210ENST00000494339 FAM216AQ8WUB2 273 aa16.88■□□□□ 0.29
KPNA1-210ENST00000494339 RAB39BQ96DA2 213 aa16.88■□□□□ 0.29
KPNA1-210ENST00000494339 WNK2Q9Y3S1 2297 aa16.88■□□□□ 0.29
KPNA1-210ENST00000494339 ZNF16P17020 682 aaPredicted RBP16.88■□□□□ 0.29
KPNA1-210ENST00000494339 F2RP25116 425 aa16.88■□□□□ 0.29
KPNA1-210ENST00000494339 PSMB6P28072 239 aa16.88■□□□□ 0.29
KPNA1-210ENST00000494339 PRB3Q04118 309 aaPredicted RBP16.88■□□□□ 0.29
KPNA1-210ENST00000494339 C11orf87Q6NUJ2 197 aa16.88■□□□□ 0.29
KPNA1-210ENST00000494339 H0Y980 276 aa16.87■□□□□ 0.29
KPNA1-210ENST00000494339 ITGB1BP1O14713 200 aa16.87■□□□□ 0.29
KPNA1-210ENST00000494339 RPL39P5Q59GN2 51 aa16.87■□□□□ 0.29
KPNA1-210ENST00000494339 LYG1Q8N1E2 194 aa16.87■□□□□ 0.29
KPNA1-210ENST00000494339 ZBTB34Q8NCN2 500 aa16.87■□□□□ 0.29
KPNA1-210ENST00000494339 THAP6Q8TBB0 222 aa16.87■□□□□ 0.29
KPNA1-210ENST00000494339 C18orf12Q96KH6 178 aa16.87■□□□□ 0.29
KPNA1-210ENST00000494339 OR10C1Q96KK4 312 aa16.87■□□□□ 0.29
KPNA1-210ENST00000494339 TMEM56Q96MV1 263 aa16.87■□□□□ 0.29
KPNA1-210ENST00000494339 SESN1Q9Y6P5 492 aa16.87■□□□□ 0.29
KPNA1-210ENST00000494339 TMEM56-RWDD3S4R434 201 aa16.87■□□□□ 0.29
KPNA1-210ENST00000494339 ITPR2Q14571 2701 aa16.87■□□□□ 0.29
KPNA1-210ENST00000494339 CSMD1Q96PZ7 3565 aa16.87■□□□□ 0.29
KPNA1-210ENST00000494339 L7N2F9 121 aa16.86■□□□□ 0.29
KPNA1-210ENST00000494339 MPC2O95563 127 aa16.86■□□□□ 0.29
KPNA1-210ENST00000494339 RPA2P15927 270 aa16.86■□□□□ 0.29
KPNA1-210ENST00000494339 ARF6P62330 175 aa16.86■□□□□ 0.29
KPNA1-210ENST00000494339 MSMO1Q15800 293 aa16.86■□□□□ 0.29
KPNA1-210ENST00000494339 CLEC12BQ2HXU8 276 aa16.86■□□□□ 0.29
KPNA1-210ENST00000494339 GGNBP1Q5YKI7 109 aa16.86■□□□□ 0.29
KPNA1-210ENST00000494339 SLC25A48Q6ZT89 311 aaKnown RBP16.86■□□□□ 0.29
KPNA1-210ENST00000494339 TMED3Q9Y3Q3 217 aa16.86■□□□□ 0.29
KPNA1-210ENST00000494339 UNC79Q9P2D8 2635 aa16.86■□□□□ 0.29
KPNA1-210ENST00000494339 ARPC5O15511 151 aa16.86■□□□□ 0.29
KPNA1-210ENST00000494339 PROP1O75360 226 aa16.86■□□□□ 0.29
KPNA1-210ENST00000494339 UCP1P25874 307 aa16.86■□□□□ 0.29
KPNA1-210ENST00000494339 DSCR9P59020 149 aa16.86■□□□□ 0.29
KPNA1-210ENST00000494339 LINC00205P59089 165 aa16.86■□□□□ 0.29
KPNA1-210ENST00000494339 DEFB113Q30KQ7 82 aa16.86■□□□□ 0.29
KPNA1-210ENST00000494339 ZNF546Q86UE3 836 aa16.86■□□□□ 0.29
KPNA1-210ENST00000494339 TMEM133Q9H2Q1 129 aa16.86■□□□□ 0.29
KPNA1-210ENST00000494339 BEX4Q9NWD9 120 aaPredicted RBP16.86■□□□□ 0.29
KPNA1-210ENST00000494339 BAHCC1Q9P281 2608 aa16.85■□□□□ 0.29
KPNA1-210ENST00000494339 VPS13CQ709C8 3753 aa16.85■□□□□ 0.29
KPNA1-210ENST00000494339 MAP1AP78559 2803 aaPredicted RBP16.85■□□□□ 0.29
KPNA1-210ENST00000494339 SAA2-SAA4A0A096LPE2 208 aa16.85■□□□□ 0.29
KPNA1-210ENST00000494339 DUXBA0A1W2PPF3 345 aa16.85■□□□□ 0.29
KPNA1-210ENST00000494339 MPTX1A8MV57 137 aa16.85■□□□□ 0.29
KPNA1-210ENST00000494339 SAA2P0DJI9 122 aaPredicted RBP16.85■□□□□ 0.29
KPNA1-210ENST00000494339 IL15RAQ13261 267 aa16.85■□□□□ 0.29
KPNA1-210ENST00000494339 EIF4EBP1Q13541 118 aaPredicted RBP16.85■□□□□ 0.29
KPNA1-210ENST00000494339 IAH1Q2TAA2 248 aaPredicted RBP16.85■□□□□ 0.29
KPNA1-210ENST00000494339 LRRC37A5PQ49AS3 106 aa16.85■□□□□ 0.29
KPNA1-210ENST00000494339 C1orf229Q6ZS94 237 aaPredicted RBP16.85■□□□□ 0.29
KPNA1-210ENST00000494339 ODF3L1Q8IXM7 274 aa16.85■□□□□ 0.29
KPNA1-210ENST00000494339 LHFPL5Q8TAF8 219 aa16.85■□□□□ 0.29
KPNA1-210ENST00000494339 IL22RA2Q969J5 263 aa16.85■□□□□ 0.29
KPNA1-210ENST00000494339 A0A087X0M5 115 aa16.84■□□□□ 0.29
KPNA1-210ENST00000494339 A0A1B0GX30 115 aa16.84■□□□□ 0.29
KPNA1-210ENST00000494339 hCG_1809904A0A1W2PP81 198 aa16.84■□□□□ 0.29
KPNA1-210ENST00000494339 A0A1W2PPE2 198 aa16.84■□□□□ 0.29
KPNA1-210ENST00000494339 A0A1W2PR64 198 aa16.84■□□□□ 0.29
KPNA1-210ENST00000494339 A0A1W2PRV1 198 aa16.84■□□□□ 0.29
KPNA1-210ENST00000494339 RAB29O14966 203 aa16.84■□□□□ 0.29
KPNA1-210ENST00000494339 CDS2O95674 445 aa16.84■□□□□ 0.29
KPNA1-210ENST00000494339 PET100P0DJ07 73 aa16.84■□□□□ 0.29
KPNA1-210ENST00000494339 CXCL2P19875 107 aa16.84■□□□□ 0.29
KPNA1-210ENST00000494339 RPL30P62888 115 aaKnown RBP16.84■□□□□ 0.29
KPNA1-210ENST00000494339 ABHD12Q8N2K0 398 aa16.84■□□□□ 0.29
KPNA1-210ENST00000494339 Q8N7P7 452 aa16.84■□□□□ 0.29
KPNA1-210ENST00000494339 LPAR2Q9HBW0 351 aa16.84■□□□□ 0.29
KPNA1-210ENST00000494339 RNF212BA8MTL3 300 aa16.84■□□□□ 0.29
KPNA1-210ENST00000494339 A8MXK9 166 aa16.84■□□□□ 0.29
KPNA1-210ENST00000494339 FAM157AC9JC47 383 aa16.84■□□□□ 0.29
KPNA1-210ENST00000494339 M0R1X1 148 aa16.84■□□□□ 0.29
KPNA1-210ENST00000494339 ENSAO43768 121 aaKnown RBP16.84■□□□□ 0.29
KPNA1-210ENST00000494339 RBP4P02753 201 aa16.84■□□□□ 0.29
KPNA1-210ENST00000494339 OR2B11Q5JQS5 317 aa16.84■□□□□ 0.29
KPNA1-210ENST00000494339 LYZL2Q7Z4W2 148 aa16.84■□□□□ 0.29
KPNA1-210ENST00000494339 ZNF695Q8IW36 515 aa16.84■□□□□ 0.29
KPNA1-210ENST00000494339 MFFQ9GZY8 342 aa16.84■□□□□ 0.29
KPNA1-210ENST00000494339 MMP26Q9NRE1 261 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms