RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 SCCPDHQ8NBX0 429 aa9.7□□□□□ -0.86
RFC4-214ENST00000494047 OR10P1Q8NGE3 313 aa9.7□□□□□ -0.86
RFC4-214ENST00000494047 NANPQ8TBE9 248 aa9.7□□□□□ -0.86
RFC4-214ENST00000494047 RCC1LQ96I51 464 aaKnown RBP9.7□□□□□ -0.86
RFC4-214ENST00000494047 FAM210BQ96KR6 192 aa9.7□□□□□ -0.86
RFC4-214ENST00000494047 BBC3Q96PG8 261 aaPredicted RBP9.7□□□□□ -0.86
RFC4-214ENST00000494047 PFDN5Q99471 154 aa9.7□□□□□ -0.86
RFC4-214ENST00000494047 CXXC4Q9H2H0 198 aa9.7□□□□□ -0.86
RFC4-214ENST00000494047 NCOR1P1Q9H4R4 102 aa9.7□□□□□ -0.86
RFC4-214ENST00000494047 ZDHHC11Q9H8X9 412 aa9.7□□□□□ -0.86
RFC4-214ENST00000494047 SDF2L1Q9HCN8 221 aa9.7□□□□□ -0.86
RFC4-214ENST00000494047 RPRMQ9NS64 109 aa9.7□□□□□ -0.86
RFC4-214ENST00000494047 PITPNC1Q9UKF7 332 aa9.7□□□□□ -0.86
RFC4-214ENST00000494047 LOC400499M0QZD8 3231 aa9.7□□□□□ -0.86
RFC4-214ENST00000494047 DOCK10Q96BY6 2186 aa9.69□□□□□ -0.86
RFC4-214ENST00000494047 FAM166BA8MTA8 275 aa9.69□□□□□ -0.86
RFC4-214ENST00000494047 ZNF727A8MUV8 499 aa9.69□□□□□ -0.86
RFC4-214ENST00000494047 HSPB6O14558 160 aa9.69□□□□□ -0.86
RFC4-214ENST00000494047 CYB5BO43169 146 aa9.69□□□□□ -0.86
RFC4-214ENST00000494047 RBFOX2O43251 390 aaKnown RBP eCLIP9.69□□□□□ -0.86
RFC4-214ENST00000494047 SPINT2O43291 252 aa9.69□□□□□ -0.86
RFC4-214ENST00000494047 TNFSF12O43508 249 aa9.69□□□□□ -0.86
RFC4-214ENST00000494047 PDE6DO43924 150 aa9.69□□□□□ -0.86
RFC4-214ENST00000494047 KBTBD11O94819 623 aa9.69□□□□□ -0.86
RFC4-214ENST00000494047 NGFP01138 241 aa9.69□□□□□ -0.86
RFC4-214ENST00000494047 IFNA10P01566 189 aa9.69□□□□□ -0.86
RFC4-214ENST00000494047 NQO2P16083 231 aa9.69□□□□□ -0.86
RFC4-214ENST00000494047 WT1P19544 449 aaPredicted RBP9.69□□□□□ -0.86
RFC4-214ENST00000494047 CEACAM6P40199 344 aa9.69□□□□□ -0.86
RFC4-214ENST00000494047 AKR1C3P42330 323 aa9.69□□□□□ -0.86
RFC4-214ENST00000494047 FAM3BP58499 235 aaPredicted RBP9.69□□□□□ -0.86
RFC4-214ENST00000494047 HTD2P86397 168 aa9.69□□□□□ -0.86
RFC4-214ENST00000494047 RUNX1Q01196 453 aa9.69□□□□□ -0.86
RFC4-214ENST00000494047 SRSF6Q13247 344 aaKnown RBP9.69□□□□□ -0.86
RFC4-214ENST00000494047 TBR1Q16650 682 aa9.69□□□□□ -0.86
RFC4-214ENST00000494047 VWC2Q2TAL6 325 aa9.69□□□□□ -0.86
RFC4-214ENST00000494047 ACOT6Q3I5F7 207 aaPredicted RBP9.69□□□□□ -0.86
RFC4-214ENST00000494047 FAM90A2PQ658T7 463 aa9.69□□□□□ -0.86
RFC4-214ENST00000494047 NCR3LG1Q68D85 454 aa9.69□□□□□ -0.86
RFC4-214ENST00000494047 OR2T2Q6IF00 324 aa9.69□□□□□ -0.86
RFC4-214ENST00000494047 ETV3LQ6ZN32 361 aa9.69□□□□□ -0.86
RFC4-214ENST00000494047 Q6ZT83 130 aa9.69□□□□□ -0.86
RFC4-214ENST00000494047 DRAM1Q8N682 238 aa9.69□□□□□ -0.86
RFC4-214ENST00000494047 Q8WTZ3 238 aa9.69□□□□□ -0.86
RFC4-214ENST00000494047 LHX4Q969G2 390 aa9.69□□□□□ -0.86
RFC4-214ENST00000494047 WDYHV1Q96HA8 205 aa9.69□□□□□ -0.86
RFC4-214ENST00000494047 CYYR1Q96J86 154 aa9.69□□□□□ -0.86
RFC4-214ENST00000494047 GSN-AS1Q9NRJ2 163 aa9.69□□□□□ -0.86
RFC4-214ENST00000494047 IL17BQ9UHF5 180 aa9.69□□□□□ -0.86
RFC4-214ENST00000494047 ZFP92A6NM28 416 aa9.68□□□□□ -0.86
RFC4-214ENST00000494047 LRRC30A6NM36 301 aa9.68□□□□□ -0.86
RFC4-214ENST00000494047 H0YL77 283 aa9.68□□□□□ -0.86
RFC4-214ENST00000494047 ITGB1BP1O14713 200 aa9.68□□□□□ -0.86
RFC4-214ENST00000494047 WDR1O75083 606 aa9.68□□□□□ -0.86
RFC4-214ENST00000494047 CLN5O75503 358 aa9.68□□□□□ -0.86
RFC4-214ENST00000494047 CLDN1O95832 211 aa9.68□□□□□ -0.86
RFC4-214ENST00000494047 IGKV1-5P01602 117 aa9.68□□□□□ -0.86
RFC4-214ENST00000494047 METTL15P1P0C7V9 234 aa9.68□□□□□ -0.86
RFC4-214ENST00000494047 CBR1P16152 277 aa9.68□□□□□ -0.86
RFC4-214ENST00000494047 KITLGP21583 273 aa9.68□□□□□ -0.86
RFC4-214ENST00000494047 SRP14P37108 136 aaKnown RBP9.68□□□□□ -0.86
RFC4-214ENST00000494047 GNB2P62879 340 aa9.68□□□□□ -0.86
RFC4-214ENST00000494047 TMEM267Q0VDI3 215 aaPredicted RBP9.68□□□□□ -0.86
RFC4-214ENST00000494047 TMEM241Q24JQ0 296 aa9.68□□□□□ -0.86
RFC4-214ENST00000494047 AARDQ4LEZ3 155 aa9.68□□□□□ -0.86
RFC4-214ENST00000494047 C9orf135Q5VTT2 229 aa9.68□□□□□ -0.86
RFC4-214ENST00000494047 KCNIP4Q6PIL6 250 aa9.68□□□□□ -0.86
RFC4-214ENST00000494047 FGFRL1Q8N441 504 aa9.68□□□□□ -0.86
RFC4-214ENST00000494047 OR52E5Q8NH55 327 aa9.68□□□□□ -0.86
RFC4-214ENST00000494047 CA5BP1Q8WTZ4 195 aa9.68□□□□□ -0.86
RFC4-214ENST00000494047 ACY3Q96HD9 319 aa9.68□□□□□ -0.86
RFC4-214ENST00000494047 DIRC2Q96SL1 478 aa9.68□□□□□ -0.86
RFC4-214ENST00000494047 IMMP2LQ96T52 175 aa9.68□□□□□ -0.86
RFC4-214ENST00000494047 TMEM204Q9BSN7 226 aa9.68□□□□□ -0.86
RFC4-214ENST00000494047 SRD5A3Q9H8P0 318 aa9.68□□□□□ -0.86
RFC4-214ENST00000494047 GFOD1Q9NXC2 390 aa9.68□□□□□ -0.86
RFC4-214ENST00000494047 ZMAT5Q9UDW3 170 aaKnown RBP9.68□□□□□ -0.86
RFC4-214ENST00000494047 PIEZO2Q9H5I5 2752 aa9.68□□□□□ -0.86
RFC4-214ENST00000494047 PCSK5Q92824 1860 aa9.68□□□□□ -0.86
RFC4-214ENST00000494047 FASNP49327 2511 aaKnown RBP9.68□□□□□ -0.86
RFC4-214ENST00000494047 F6UZH7 168 aa9.67□□□□□ -0.86
RFC4-214ENST00000494047 SIRPB1O00241 398 aa9.67□□□□□ -0.86
RFC4-214ENST00000494047 NKX2-8O15522 239 aa9.67□□□□□ -0.86
RFC4-214ENST00000494047 ZNF737O75373 536 aa9.67□□□□□ -0.86
RFC4-214ENST00000494047 IGLV2-14P01704 120 aa9.67□□□□□ -0.86
RFC4-214ENST00000494047 IGHG3P01860 377 aa9.67□□□□□ -0.86
RFC4-214ENST00000494047 P0C879 139 aa9.67□□□□□ -0.86
RFC4-214ENST00000494047 CEBPGP53567 150 aa9.67□□□□□ -0.86
RFC4-214ENST00000494047 ATP5IP56385 69 aaPredicted RBP9.67□□□□□ -0.86
RFC4-214ENST00000494047 PRSS12P56730 875 aa9.67□□□□□ -0.86
RFC4-214ENST00000494047 ARG2P78540 354 aa9.67□□□□□ -0.86
RFC4-214ENST00000494047 CCL20P78556 96 aa9.67□□□□□ -0.86
RFC4-214ENST00000494047 LCN2P80188 198 aa9.67□□□□□ -0.86
RFC4-214ENST00000494047 RPL19P84098 196 aaKnown RBP9.67□□□□□ -0.86
RFC4-214ENST00000494047 ZNF766Q5HY98 468 aa9.67□□□□□ -0.86
RFC4-214ENST00000494047 SPANXN5Q5MJ07 72 aa9.67□□□□□ -0.86
RFC4-214ENST00000494047 C20orf204Q6ZNR8 217 aa9.67□□□□□ -0.86
RFC4-214ENST00000494047 H2BFWTQ7Z2G1 175 aa9.67□□□□□ -0.86
RFC4-214ENST00000494047 OR10A7Q8NGE5 316 aa9.67□□□□□ -0.86
RFC4-214ENST00000494047 SMIM7Q9BQ49 75 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms