RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 VSTM5A8MXK1 200 aa6.85□□□□□ -1.31
HDAC6-234ENST00000493923 TCF21O43680 179 aa6.85□□□□□ -1.31
HDAC6-234ENST00000493923 TMEM225BP0DP42 221 aa6.85□□□□□ -1.31
HDAC6-234ENST00000493923 CCNOP22674 350 aa6.85□□□□□ -1.31
HDAC6-234ENST00000493923 LMO1P25800 156 aa6.85□□□□□ -1.31
HDAC6-234ENST00000493923 NPY4RP50391 375 aa6.85□□□□□ -1.31
HDAC6-234ENST00000493923 CTXN1P60606 82 aa6.85□□□□□ -1.31
HDAC6-234ENST00000493923 HIST1H3AP68431 136 aa6.85□□□□□ -1.31
HDAC6-234ENST00000493923 MRPS34P82930 218 aaKnown RBP6.85□□□□□ -1.31
HDAC6-234ENST00000493923 ZNF616Q08AN1 781 aa6.85□□□□□ -1.31
HDAC6-234ENST00000493923 ODF4Q2M2E3 257 aa6.85□□□□□ -1.31
HDAC6-234ENST00000493923 GPR157Q5UAW9 335 aa6.85□□□□□ -1.31
HDAC6-234ENST00000493923 NCR3LG1Q68D85 454 aa6.85□□□□□ -1.31
HDAC6-234ENST00000493923 OR8G2PQ6IF36 304 aa6.85□□□□□ -1.31
HDAC6-234ENST00000493923 SLC25A24Q6NUK1 477 aa6.85□□□□□ -1.31
HDAC6-234ENST00000493923 LEG1Q6P5S2 330 aa6.85□□□□□ -1.31
HDAC6-234ENST00000493923 PET117Q6UWS5 81 aa6.85□□□□□ -1.31
HDAC6-234ENST00000493923 DPPA3Q6W0C5 159 aa6.85□□□□□ -1.31
HDAC6-234ENST00000493923 FOXL2NBQ6ZUU3 175 aa6.85□□□□□ -1.31
HDAC6-234ENST00000493923 C5orf24Q7Z6I8 188 aa6.85□□□□□ -1.31
HDAC6-234ENST00000493923 SYT9Q86SS6 491 aa6.85□□□□□ -1.31
HDAC6-234ENST00000493923 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.85□□□□□ -1.31
HDAC6-234ENST00000493923 POC1AQ8NBT0 407 aa6.85□□□□□ -1.31
HDAC6-234ENST00000493923 SLC26A10Q8NG04 563 aa6.85□□□□□ -1.31
HDAC6-234ENST00000493923 OR51A7Q8NH64 312 aa6.85□□□□□ -1.31
HDAC6-234ENST00000493923 SLC25A40Q8TBP6 338 aa6.85□□□□□ -1.31
HDAC6-234ENST00000493923 FRZBQ92765 325 aa6.85□□□□□ -1.31
HDAC6-234ENST00000493923 FAM3DQ96BQ1 224 aa6.85□□□□□ -1.31
HDAC6-234ENST00000493923 CST11Q9H112 138 aa6.85□□□□□ -1.31
HDAC6-234ENST00000493923 MS4A5Q9H3V2 200 aa6.85□□□□□ -1.31
HDAC6-234ENST00000493923 MED20Q9H944 212 aa6.85□□□□□ -1.31
HDAC6-234ENST00000493923 HIF1ANQ9NWT6 349 aa6.85□□□□□ -1.31
HDAC6-234ENST00000493923 KIAA1456Q9P272 454 aa6.85□□□□□ -1.31
HDAC6-234ENST00000493923 CKLFQ9UBR5 152 aa6.85□□□□□ -1.31
HDAC6-234ENST00000493923 HIF3AQ9Y2N7 669 aa6.85□□□□□ -1.31
HDAC6-234ENST00000493923 C5orf49A4QMS7 147 aa6.84□□□□□ -1.31
HDAC6-234ENST00000493923 RBFOX3A6NFN3 312 aa6.84□□□□□ -1.31
HDAC6-234ENST00000493923 CEACAM18A8MTB9 384 aa6.84□□□□□ -1.31
HDAC6-234ENST00000493923 PRSS47A8MTI9 375 aa6.84□□□□□ -1.31
HDAC6-234ENST00000493923 CYB5R3P00387 301 aaPredicted RBP6.84□□□□□ -1.31
HDAC6-234ENST00000493923 IGHV1-46P01743 117 aa6.84□□□□□ -1.31
HDAC6-234ENST00000493923 IGHV3-13P01766 116 aa6.84□□□□□ -1.31
HDAC6-234ENST00000493923 IGHMP01871 453 aa6.84□□□□□ -1.31
HDAC6-234ENST00000493923 PRH1P02810 166 aa6.84□□□□□ -1.31
HDAC6-234ENST00000493923 GSTP1P09211 210 aaKnown RBP6.84□□□□□ -1.31
HDAC6-234ENST00000493923 CXCL1P09341 107 aa6.84□□□□□ -1.31
HDAC6-234ENST00000493923 RPL12P30050 165 aaKnown RBP6.84□□□□□ -1.31
HDAC6-234ENST00000493923 BRS3P32247 399 aa6.84□□□□□ -1.31
HDAC6-234ENST00000493923 SRP14P37108 136 aaKnown RBP6.84□□□□□ -1.31
HDAC6-234ENST00000493923 P2RY1P47900 373 aa6.84□□□□□ -1.31
HDAC6-234ENST00000493923 DAP3P51398 398 aaKnown RBP6.84□□□□□ -1.31
HDAC6-234ENST00000493923 FXYD6P3P58550 94 aa6.84□□□□□ -1.31
HDAC6-234ENST00000493923 RPL27P61353 136 aaKnown RBP6.84□□□□□ -1.31
HDAC6-234ENST00000493923 TAF9Q16594 264 aa6.84□□□□□ -1.31
HDAC6-234ENST00000493923 TMEM183BQ1AE95 376 aa6.84□□□□□ -1.31
HDAC6-234ENST00000493923 TBC1D28Q2M2D7 210 aa6.84□□□□□ -1.31
HDAC6-234ENST00000493923 ALG10Q5BKT4 473 aa6.84□□□□□ -1.31
HDAC6-234ENST00000493923 DEGS2Q6QHC5 323 aa6.84□□□□□ -1.31
HDAC6-234ENST00000493923 OR4S1Q8NGB4 309 aa6.84□□□□□ -1.31
HDAC6-234ENST00000493923 CASTOR1Q8WTX7 329 aa6.84□□□□□ -1.31
HDAC6-234ENST00000493923 BPIFA2Q96DR5 249 aa6.84□□□□□ -1.31
HDAC6-234ENST00000493923 SMIM12Q96EX1 92 aa6.84□□□□□ -1.31
HDAC6-234ENST00000493923 Q96M85 177 aa6.84□□□□□ -1.31
HDAC6-234ENST00000493923 IMMP2LQ96T52 175 aa6.84□□□□□ -1.31
HDAC6-234ENST00000493923 PDCD1LG2Q9BQ51 273 aa6.84□□□□□ -1.31
HDAC6-234ENST00000493923 OR2H1Q9GZK4 316 aa6.84□□□□□ -1.31
HDAC6-234ENST00000493923 OR2J1Q9GZK6 312 aa6.84□□□□□ -1.31
HDAC6-234ENST00000493923 DNAJC4Q9NNZ3 241 aa6.84□□□□□ -1.31
HDAC6-234ENST00000493923 G6PC2Q9NQR9 355 aa6.84□□□□□ -1.31
HDAC6-234ENST00000493923 FKBP11Q9NYL4 201 aa6.84□□□□□ -1.31
HDAC6-234ENST00000493923 IKZF2Q9UKS7 526 aa6.84□□□□□ -1.31
HDAC6-234ENST00000493923 TMEM14AQ9Y6G1 99 aa6.84□□□□□ -1.31
HDAC6-234ENST00000493923 LOC105371242A0A075B767 164 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 FAM230AA0A1W2PPH8 454 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 NPIPB13A6NJU9 1138 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 A6NJY4 79 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 B4DSR2 109 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 NPIPB4C9JG80 1138 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 E5RGE8 158 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 H0YIZ8 118 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 M0QYG6 137 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 SPRY3O43610 288 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 GPR137BO60478 399 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 MMP23AO75900 390 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 MPZL1O95297 269 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 IFNA21P01568 189 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 ERCC1P07992 297 aaPredicted RBP6.83□□□□□ -1.32
HDAC6-234ENST00000493923 CTLA4P16410 223 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 ADRA2CP18825 462 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 FPR2P25090 351 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 FCGR2CP31995 323 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 APLNRP35414 380 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 PTTG1IPP53801 180 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 TMEM33P57088 247 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 FAM3BP58499 235 aaPredicted RBP6.83□□□□□ -1.32
HDAC6-234ENST00000493923 UBE2G2P60604 165 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 HLA-DRB3P79483 266 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 OR5I1Q13606 314 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 PDZD11Q5EBL8 140 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 ZNF506Q5JVG8 444 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms