RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 ARHGAP5-AS1Q96IT6 56 aa18.41■□□□□ 0.54
RHBDD3-206ENST00000493894 CMSS1Q9BQ75 279 aaKnown RBP18.41■□□□□ 0.54
RHBDD3-206ENST00000493894 PECRQ9BY49 303 aa18.41■□□□□ 0.54
RHBDD3-206ENST00000493894 C11orf54Q9H0W9 315 aaPredicted RBP18.41■□□□□ 0.54
RHBDD3-206ENST00000493894 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.41■□□□□ 0.54
RHBDD3-206ENST00000493894 FBXO7Q9Y3I1 522 aa18.41■□□□□ 0.54
RHBDD3-206ENST00000493894 CRHBPP24387 322 aa18.4■□□□□ 0.54
RHBDD3-206ENST00000493894 GNB1P62873 340 aa18.4■□□□□ 0.54
RHBDD3-206ENST00000493894 CX3CL1P78423 397 aa18.4■□□□□ 0.54
RHBDD3-206ENST00000493894 FABP5Q01469 135 aa18.4■□□□□ 0.54
RHBDD3-206ENST00000493894 FAM3DQ96BQ1 224 aa18.4■□□□□ 0.54
RHBDD3-206ENST00000493894 MGLLQ99685 303 aa18.4■□□□□ 0.54
RHBDD3-206ENST00000493894 ACOT13Q9NPJ3 140 aa18.4■□□□□ 0.54
RHBDD3-206ENST00000493894 SCOCQ9UIL1 159 aa18.4■□□□□ 0.54
RHBDD3-206ENST00000493894 FOXA2Q9Y261 457 aaPredicted RBP18.4■□□□□ 0.54
RHBDD3-206ENST00000493894 A3GALT2U3KPV4 340 aa18.4■□□□□ 0.54
RHBDD3-206ENST00000493894 SCTP09683 121 aa18.39■□□□□ 0.53
RHBDD3-206ENST00000493894 INSL3P51460 131 aa18.39■□□□□ 0.53
RHBDD3-206ENST00000493894 TMEM50BP56557 158 aa18.39■□□□□ 0.53
RHBDD3-206ENST00000493894 C19orf54Q5BKX5 351 aa18.39■□□□□ 0.53
RHBDD3-206ENST00000493894 ASPHD1Q5U4P2 390 aa18.39■□□□□ 0.53
RHBDD3-206ENST00000493894 PTX4Q96A99 478 aa18.39■□□□□ 0.53
RHBDD3-206ENST00000493894 RNF5Q99942 180 aa18.39■□□□□ 0.53
RHBDD3-206ENST00000493894 VCX3BQ9H321 246 aa18.39■□□□□ 0.53
RHBDD3-206ENST00000493894 ZNF221Q9UK13 617 aa18.39■□□□□ 0.53
RHBDD3-206ENST00000493894 V9GY05 133 aa18.39■□□□□ 0.53
RHBDD3-206ENST00000493894 DENRO43583 198 aaKnown RBP18.38■□□□□ 0.53
RHBDD3-206ENST00000493894 MAP2K4P45985 399 aa18.38■□□□□ 0.53
RHBDD3-206ENST00000493894 PSMD7P51665 324 aa18.38■□□□□ 0.53
RHBDD3-206ENST00000493894 MRPS15P82914 257 aaKnown RBP18.38■□□□□ 0.53
RHBDD3-206ENST00000493894 TMEM267Q0VDI3 215 aaPredicted RBP18.38■□□□□ 0.53
RHBDD3-206ENST00000493894 RNF150Q9ULK6 438 aa18.38■□□□□ 0.53
RHBDD3-206ENST00000493894 ZNF256Q9Y2P7 627 aaPredicted RBP18.38■□□□□ 0.53
RHBDD3-206ENST00000493894 LSM4Q9Y4Z0 139 aaKnown RBP18.38■□□□□ 0.53
RHBDD3-206ENST00000493894 SOX15O60248 233 aa18.37■□□□□ 0.53
RHBDD3-206ENST00000493894 PLAC9Q5JTB6 97 aa18.37■□□□□ 0.53
RHBDD3-206ENST00000493894 PYHIN1Q6K0P9 492 aa18.37■□□□□ 0.53
RHBDD3-206ENST00000493894 DRAXINQ8NBI3 349 aaPredicted RBP18.37■□□□□ 0.53
RHBDD3-206ENST00000493894 METTL1Q9UBP6 276 aaKnown RBP18.37■□□□□ 0.53
RHBDD3-206ENST00000493894 TRDCB7Z8K6 153 aa18.36■□□□□ 0.53
RHBDD3-206ENST00000493894 FCN1O00602 326 aa18.36■□□□□ 0.53
RHBDD3-206ENST00000493894 LDLRAD4O15165 306 aa18.36■□□□□ 0.53
RHBDD3-206ENST00000493894 SPDEFO95238 335 aa18.36■□□□□ 0.53
RHBDD3-206ENST00000493894 APOA2P02652 100 aa18.36■□□□□ 0.53
RHBDD3-206ENST00000493894 TBCEQ15813 527 aaPredicted RBP18.36■□□□□ 0.53
RHBDD3-206ENST00000493894 C2orf76Q3KRA6 126 aa18.36■□□□□ 0.53
RHBDD3-206ENST00000493894 HES5Q5TA89 166 aa18.36■□□□□ 0.53
RHBDD3-206ENST00000493894 CD200R1LQ6Q8B3 271 aa18.36■□□□□ 0.53
RHBDD3-206ENST00000493894 ZNF367Q7RTV3 350 aa18.36■□□□□ 0.53
RHBDD3-206ENST00000493894 PDPNQ86YL7 162 aa18.36■□□□□ 0.53
RHBDD3-206ENST00000493894 WWC2-AS2Q96NR7 200 aa18.36■□□□□ 0.53
RHBDD3-206ENST00000493894 TSNAXQ99598 290 aaKnown RBP18.36■□□□□ 0.53
RHBDD3-206ENST00000493894 ALX4Q9H161 411 aaPredicted RBP18.36■□□□□ 0.53
RHBDD3-206ENST00000493894 RDH8Q9NYR8 311 aa18.36■□□□□ 0.53
RHBDD3-206ENST00000493894 BLOC1S6Q9UL45 172 aa18.36■□□□□ 0.53
RHBDD3-206ENST00000493894 IGKV1-6A0A0C4DH72 117 aa18.35■□□□□ 0.53
RHBDD3-206ENST00000493894 TMEM272A0A1B0GTI8 110 aa18.35■□□□□ 0.53
RHBDD3-206ENST00000493894 OVOL1O14753 267 aa18.35■□□□□ 0.53
RHBDD3-206ENST00000493894 TFAP2AP05549 437 aa18.35■□□□□ 0.53
RHBDD3-206ENST00000493894 LGALS1P09382 135 aaKnown RBP18.35■□□□□ 0.53
RHBDD3-206ENST00000493894 NHLRC4P0CG21 123 aaPredicted RBP18.35■□□□□ 0.53
RHBDD3-206ENST00000493894 SERPINB10P48595 397 aa18.35■□□□□ 0.53
RHBDD3-206ENST00000493894 HSPA13P48723 471 aa18.35■□□□□ 0.53
RHBDD3-206ENST00000493894 PSG5Q15238 335 aa18.35■□□□□ 0.53
RHBDD3-206ENST00000493894 ACTBL2Q562R1 376 aa18.35■□□□□ 0.53
RHBDD3-206ENST00000493894 IZUMO2Q6UXV1 221 aa18.35■□□□□ 0.53
RHBDD3-206ENST00000493894 PPP1R27Q86WC6 154 aa18.35■□□□□ 0.53
RHBDD3-206ENST00000493894 ZNF383Q8NA42 475 aa18.35■□□□□ 0.53
RHBDD3-206ENST00000493894 CASTOR1Q8WTX7 329 aa18.35■□□□□ 0.53
RHBDD3-206ENST00000493894 CLCC1Q96S66 551 aa18.35■□□□□ 0.53
RHBDD3-206ENST00000493894 FAM103A1Q9BTL3 118 aaKnown RBP18.35■□□□□ 0.53
RHBDD3-206ENST00000493894 RAB22AQ9UL26 194 aa18.35■□□□□ 0.53
RHBDD3-206ENST00000493894 GAB2Q9UQC2 676 aa18.35■□□□□ 0.53
RHBDD3-206ENST00000493894 NUBP2Q9Y5Y2 271 aa18.35■□□□□ 0.53
RHBDD3-206ENST00000493894 LINC01619G3V211 115 aa18.34■□□□□ 0.53
RHBDD3-206ENST00000493894 PDCD5O14737 125 aa18.34■□□□□ 0.53
RHBDD3-206ENST00000493894 PROP1O75360 226 aa18.34■□□□□ 0.53
RHBDD3-206ENST00000493894 LY86O95711 162 aa18.34■□□□□ 0.53
RHBDD3-206ENST00000493894 CA2P00918 260 aa18.34■□□□□ 0.53
RHBDD3-206ENST00000493894 IGKV1-16P04430 117 aa18.34■□□□□ 0.53
RHBDD3-206ENST00000493894 CD3GP09693 182 aa18.34■□□□□ 0.53
RHBDD3-206ENST00000493894 UNQ5815/PRO19632Q6UWF5 114 aa18.34■□□□□ 0.53
RHBDD3-206ENST00000493894 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.34■□□□□ 0.53
RHBDD3-206ENST00000493894 OR4A4PQ8NGN8 299 aa18.34■□□□□ 0.53
RHBDD3-206ENST00000493894 DCUN1D4Q92564 292 aa18.34■□□□□ 0.53
RHBDD3-206ENST00000493894 RAB3CQ96E17 227 aa18.34■□□□□ 0.53
RHBDD3-206ENST00000493894 TOLLIPQ9H0E2 274 aa18.34■□□□□ 0.53
RHBDD3-206ENST00000493894 M0R1X1 148 aa18.33■□□□□ 0.52
RHBDD3-206ENST00000493894 FABP7O15540 132 aa18.33■□□□□ 0.52
RHBDD3-206ENST00000493894 EGR2P11161 476 aaPredicted RBP18.33■□□□□ 0.52
RHBDD3-206ENST00000493894 CD40LGP29965 261 aa18.33■□□□□ 0.52
RHBDD3-206ENST00000493894 RPS16P62249 146 aaKnown RBP18.33■□□□□ 0.52
RHBDD3-206ENST00000493894 PLA2G7Q13093 441 aa18.33■□□□□ 0.52
RHBDD3-206ENST00000493894 AKIRIN2Q53H80 203 aa18.33■□□□□ 0.52
RHBDD3-206ENST00000493894 ZNF562Q6V9R5 426 aa18.33■□□□□ 0.52
RHBDD3-206ENST00000493894 ZNF429Q86V71 674 aa18.33■□□□□ 0.52
RHBDD3-206ENST00000493894 CNBD2Q96M20 576 aa18.33■□□□□ 0.52
RHBDD3-206ENST00000493894 SAP30O75446 220 aa18.32■□□□□ 0.52
RHBDD3-206ENST00000493894 GADD45AP24522 165 aa18.32■□□□□ 0.52
RHBDD3-206ENST00000493894 MYL9P24844 172 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms