RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 HSF4Q9ULV5 492 aa13.41□□□□□ -0.26
SGMS1-204ENST00000492601 WASHC3Q9Y3C0 194 aa13.41□□□□□ -0.26
SGMS1-204ENST00000492601 A0A1W2PN81 502 aa13.4□□□□□ -0.26
SGMS1-204ENST00000492601 ITGB1BP1O14713 200 aa13.4□□□□□ -0.26
SGMS1-204ENST00000492601 SNRPBP14678 240 aaKnown RBP13.4□□□□□ -0.26
SGMS1-204ENST00000492601 CRHBPP24387 322 aa13.4□□□□□ -0.26
SGMS1-204ENST00000492601 PSMA1P25786 263 aaKnown RBP13.4□□□□□ -0.26
SGMS1-204ENST00000492601 MC5RP33032 325 aa13.4□□□□□ -0.26
SGMS1-204ENST00000492601 CHRNA7P36544 502 aa13.4□□□□□ -0.26
SGMS1-204ENST00000492601 CX3CL1P78423 397 aa13.4□□□□□ -0.26
SGMS1-204ENST00000492601 ZNF616Q08AN1 781 aa13.4□□□□□ -0.26
SGMS1-204ENST00000492601 PLA2G7Q13093 441 aa13.4□□□□□ -0.26
SGMS1-204ENST00000492601 C2orf76Q3KRA6 126 aa13.4□□□□□ -0.26
SGMS1-204ENST00000492601 ZNF660Q6AZW8 331 aaPredicted RBP13.4□□□□□ -0.26
SGMS1-204ENST00000492601 PRSS48Q7RTY5 328 aa13.4□□□□□ -0.26
SGMS1-204ENST00000492601 EDARADDQ8WWZ3 215 aa13.4□□□□□ -0.26
SGMS1-204ENST00000492601 FAM3DQ96BQ1 224 aa13.4□□□□□ -0.26
SGMS1-204ENST00000492601 CLCC1Q96S66 551 aa13.4□□□□□ -0.26
SGMS1-204ENST00000492601 MGLLQ99685 303 aa13.4□□□□□ -0.26
SGMS1-204ENST00000492601 CMSS1Q9BQ75 279 aaKnown RBP13.4□□□□□ -0.26
SGMS1-204ENST00000492601 MGAT4AQ9UM21 535 aa13.4□□□□□ -0.26
SGMS1-204ENST00000492601 GAB2Q9UQC2 676 aa13.4□□□□□ -0.26
SGMS1-204ENST00000492601 TNCP24821 2201 aa13.39□□□□□ -0.27
SGMS1-204ENST00000492601 SOX15O60248 233 aa13.39□□□□□ -0.27
SGMS1-204ENST00000492601 OR8U8P0C7N1 319 aa13.39□□□□□ -0.27
SGMS1-204ENST00000492601 LINC00205P59089 165 aa13.39□□□□□ -0.27
SGMS1-204ENST00000492601 RUNX1Q01196 453 aa13.39□□□□□ -0.27
SGMS1-204ENST00000492601 C19orf54Q5BKX5 351 aa13.39□□□□□ -0.27
SGMS1-204ENST00000492601 PLAC9Q5JTB6 97 aa13.39□□□□□ -0.27
SGMS1-204ENST00000492601 HES5Q5TA89 166 aa13.39□□□□□ -0.27
SGMS1-204ENST00000492601 OR56B1Q8NGI3 324 aa13.39□□□□□ -0.27
SGMS1-204ENST00000492601 OR5AN1Q8NGI8 311 aa13.39□□□□□ -0.27
SGMS1-204ENST00000492601 FAM103A1Q9BTL3 118 aaKnown RBP13.39□□□□□ -0.27
SGMS1-204ENST00000492601 GHITMQ9H3K2 345 aa13.39□□□□□ -0.27
SGMS1-204ENST00000492601 FOXA2Q9Y261 457 aaPredicted RBP13.39□□□□□ -0.27
SGMS1-204ENST00000492601 LSM4Q9Y4Z0 139 aaKnown RBP13.39□□□□□ -0.27
SGMS1-204ENST00000492601 V9GY05 133 aa13.39□□□□□ -0.27
SGMS1-204ENST00000492601 STAB2Q8WWQ8 2551 aa13.38□□□□□ -0.27
SGMS1-204ENST00000492601 IGKV1-6A0A0C4DH72 117 aa13.38□□□□□ -0.27
SGMS1-204ENST00000492601 TMEM272A0A1B0GTI8 110 aa13.38□□□□□ -0.27
SGMS1-204ENST00000492601 DENRO43583 198 aaKnown RBP13.38□□□□□ -0.27
SGMS1-204ENST00000492601 PROP1O75360 226 aa13.38□□□□□ -0.27
SGMS1-204ENST00000492601 RBBP9O75884 186 aa13.38□□□□□ -0.27
SGMS1-204ENST00000492601 EGR2P11161 476 aaPredicted RBP13.38□□□□□ -0.27
SGMS1-204ENST00000492601 DCUN1D4Q92564 292 aa13.38□□□□□ -0.27
SGMS1-204ENST00000492601 METTL1Q9UBP6 276 aaKnown RBP13.38□□□□□ -0.27
SGMS1-204ENST00000492601 ZNF221Q9UK13 617 aa13.38□□□□□ -0.27
SGMS1-204ENST00000492601 NUBP2Q9Y5Y2 271 aa13.38□□□□□ -0.27
SGMS1-204ENST00000492601 TRDCB7Z8K6 153 aa13.37□□□□□ -0.27
SGMS1-204ENST00000492601 LDLRAD4O15165 306 aa13.37□□□□□ -0.27
SGMS1-204ENST00000492601 LY86O95711 162 aa13.37□□□□□ -0.27
SGMS1-204ENST00000492601 IGKV1-16P04430 117 aa13.37□□□□□ -0.27
SGMS1-204ENST00000492601 CRIP2P52943 208 aaPredicted RBP13.37□□□□□ -0.27
SGMS1-204ENST00000492601 PSG5Q15238 335 aa13.37□□□□□ -0.27
SGMS1-204ENST00000492601 UNQ5815/PRO19632Q6UWF5 114 aa13.37□□□□□ -0.27
SGMS1-204ENST00000492601 PPP1R27Q86WC6 154 aa13.37□□□□□ -0.27
SGMS1-204ENST00000492601 ZNF383Q8NA42 475 aa13.37□□□□□ -0.27
SGMS1-204ENST00000492601 PTX4Q96A99 478 aa13.37□□□□□ -0.27
SGMS1-204ENST00000492601 CNBD2Q96M20 576 aa13.37□□□□□ -0.27
SGMS1-204ENST00000492601 ACOT13Q9NPJ3 140 aa13.37□□□□□ -0.27
SGMS1-204ENST00000492601 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.37□□□□□ -0.272e-7■■■■■ 27.3
SGMS1-204ENST00000492601 RDH8Q9NYR8 311 aa13.37□□□□□ -0.27
SGMS1-204ENST00000492601 ZNF256Q9Y2P7 627 aaPredicted RBP13.37□□□□□ -0.27
SGMS1-204ENST00000492601 HUWE1Q7Z6Z7 4374 aaKnown RBP13.36□□□□□ -0.27
SGMS1-204ENST00000492601 A0A075B6Q4 140 aa13.36□□□□□ -0.27
SGMS1-204ENST00000492601 CA2P00918 260 aa13.36□□□□□ -0.27
SGMS1-204ENST00000492601 CD3GP09693 182 aa13.36□□□□□ -0.27
SGMS1-204ENST00000492601 SLURP1P55000 103 aa13.36□□□□□ -0.27
SGMS1-204ENST00000492601 RPS16P62249 146 aaKnown RBP13.36□□□□□ -0.27
SGMS1-204ENST00000492601 MRPS15P82914 257 aaKnown RBP13.36□□□□□ -0.27
SGMS1-204ENST00000492601 TMEM267Q0VDI3 215 aaPredicted RBP13.36□□□□□ -0.27
SGMS1-204ENST00000492601 MOGAT2Q3SYC2 334 aa13.36□□□□□ -0.27
SGMS1-204ENST00000492601 ACTBL2Q562R1 376 aa13.36□□□□□ -0.27
SGMS1-204ENST00000492601 IZUMO2Q6UXV1 221 aa13.36□□□□□ -0.27
SGMS1-204ENST00000492601 TCTEX1D1Q8N7M0 179 aa13.36□□□□□ -0.27
SGMS1-204ENST00000492601 MS4A10Q96PG2 267 aa13.36□□□□□ -0.27
SGMS1-204ENST00000492601 RNF5Q99942 180 aa13.36□□□□□ -0.27
SGMS1-204ENST00000492601 TOLLIPQ9H0E2 274 aa13.36□□□□□ -0.27
SGMS1-204ENST00000492601 RAB22AQ9UL26 194 aa13.36□□□□□ -0.27
SGMS1-204ENST00000492601 LINC01619G3V211 115 aa13.35□□□□□ -0.27
SGMS1-204ENST00000492601 M0R1X1 148 aa13.35□□□□□ -0.27
SGMS1-204ENST00000492601 OVOL1O14753 267 aa13.35□□□□□ -0.27
SGMS1-204ENST00000492601 BET1O15155 118 aa13.35□□□□□ -0.27
SGMS1-204ENST00000492601 IGHV3-11P01762 117 aa13.35□□□□□ -0.27
SGMS1-204ENST00000492601 TFAP2AP05549 437 aa13.35□□□□□ -0.27
SGMS1-204ENST00000492601 PSMD7P51665 324 aa13.35□□□□□ -0.27
SGMS1-204ENST00000492601 OR10A3P58181 314 aa13.35□□□□□ -0.27
SGMS1-204ENST00000492601 SSX1Q16384 188 aa13.35□□□□□ -0.27
SGMS1-204ENST00000492601 CD200R1LQ6Q8B3 271 aa13.35□□□□□ -0.27
SGMS1-204ENST00000492601 LFNGQ8NES3 379 aa13.35□□□□□ -0.27
SGMS1-204ENST00000492601 OR4A4PQ8NGN8 299 aa13.35□□□□□ -0.27
SGMS1-204ENST00000492601 MAFIPQ8WZ33 124 aa13.35□□□□□ -0.27
SGMS1-204ENST00000492601 DLX4Q92988 240 aaPredicted RBP13.35□□□□□ -0.27
SGMS1-204ENST00000492601 RAB3CQ96E17 227 aa13.35□□□□□ -0.27
SGMS1-204ENST00000492601 WWC2-AS2Q96NR7 200 aa13.35□□□□□ -0.27
SGMS1-204ENST00000492601 TSNAXQ99598 290 aaKnown RBP13.35□□□□□ -0.27
SGMS1-204ENST00000492601 ASCL2Q99929 193 aa13.35□□□□□ -0.27
SGMS1-204ENST00000492601 VCX3BQ9H321 246 aa13.35□□□□□ -0.27
SGMS1-204ENST00000492601 TPSG1Q9NRR2 321 aa13.35□□□□□ -0.27
SGMS1-204ENST00000492601 KCNK7Q9Y2U2 307 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms