RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 TUBG1P23258 451 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 GABRR1P24046 479 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 F2RP25116 425 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 ITGA3P26006 1051 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 CDAP32320 146 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 PTGER4P35408 488 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 ARR3P36575 388 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 MDH2P40926 338 aaKnown RBP1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 DUSP3P51452 185 aaPredicted RBP1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 GFERP55789 205 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 OR2B8PP59922 312 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 RAB4BP61018 213 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 HERV-K104P61576 105 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 RPS18P62269 152 aaKnown RBP1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 GNB2P62879 340 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 PAFAH1B2P68402 229 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 HBG1P69891 147 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 HBG2P69892 147 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 CCL20P78556 96 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 RPL19P84098 196 aaKnown RBP1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 PSG4Q00888 419 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 EWSR1Q01844 656 aaKnown RBP eCLIP1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 ZNF92Q03936 586 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 FMODQ06828 376 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 ZNF616Q08AN1 781 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 SIGLEC14Q08ET2 396 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 CHAF1BQ13112 559 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 TRA2AQ13595 282 aaKnown RBP eCLIP1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 ENDOGQ14249 297 aaKnown RBP1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 JOSD1Q15040 202 aaPredicted RBP1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 RAB35Q15286 201 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 IGFBP7Q16270 282 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 SSX2Q16385 188 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 HYAL4Q2M3T9 481 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 ZNF674Q2M3X9 581 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 LRRC75BQ2VPJ9 315 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 DEFB133Q30KQ1 61 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 CEACAM21Q3KPI0 293 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 AKIRIN2Q53H80 203 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 OR2B11Q5JQS5 317 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 CXorf66Q5JRM2 361 aaPredicted RBP1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 COA6Q5JTJ3 125 aaKnown RBP1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 SPIN3Q5JUX0 258 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 PAPPA-AS1Q5QFB9 102 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 C1orf189Q5VU69 101 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 OTPQ5XKR4 325 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 CARD17Q5XLA6 110 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 OR2T2Q6IF00 324 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 MEX3BQ6ZN04 569 aaKnown RBP1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 SSX9Q7RTT3 188 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 AAED1Q7RTV5 226 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 SLC16A13Q7RTY0 426 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 LINC00596Q86U02 117 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 STX12Q86Y82 276 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 ZNF573Q86YE8 665 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 TGIF2LYQ8IUE0 185 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 FAM219AQ8IW50 185 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 MAML2Q8IZL2 1156 aaPredicted RBP1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 GPR137CQ8N3F9 429 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 TMEM156Q8N614 296 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 SCCPDHQ8NBX0 429 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 NOXO1Q8NFA2 376 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 TSTD1Q8NFU3 115 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 OR10AD1Q8NGE0 317 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 OR10A7Q8NGE5 316 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 OR52M1Q8NGK5 317 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 OR5D18Q8NGL1 313 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 OR5D13Q8NGL4 314 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 OR5C1Q8NGR4 320 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 OR8U1Q8NH10 309 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 OR2V1Q8NHB1 315 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 OR10J5Q8NHC4 309 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 AKR7LQ8NHP1 331 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 CLDND2Q8NHS1 167 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 FAM213BQ8TBF2 198 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 SLAMF9Q96A28 289 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 GPR146Q96CH1 333 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 DNAJA3Q96EY1 480 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 ZNF799Q96GE5 643 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 ACY3Q96HD9 319 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 REEP6Q96HR9 211 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 FAM210BQ96KR6 192 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 LURAP1Q96LR2 239 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 NOL4LQ96MY1 436 aaPredicted RBP1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 ALKBH3Q96Q83 286 aaPredicted RBP1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 SPACA5Q96QH8 159 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 OR6C1Q96RD1 312 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 RASL10BQ96S79 203 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 TXNDC17Q9BRA2 123 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 CABLES2Q9BTV7 478 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 C1QTNF5Q9BXJ0 243 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 PARD6GQ9BYG4 376 aaPredicted RBP1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 MRPL37Q9BZE1 423 aaKnown RBP1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 SMIM3Q9BZL3 60 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 LINC00470Q9BZP3 86 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 SPRY4Q9C004 299 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 ZNF700Q9H0M5 742 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 LIME1Q9H400 295 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 ZNF442Q9H7R0 627 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 SRD5A3Q9H8P0 318 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms