RNA–Protein interactions for RNA: ENST00000489892.1

TRIM40-208, Transcript of tripartite motif containing 40, humanhuman

TSL 3

Gene TRIM40, Length 941 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-208ENST00000489892 USF3Q68DE3 2245 aa9.67□□□□□ -0.86
TRIM40-208ENST00000489892 KBTBD11-OT1A0A1B0GTJ5 212 aa9.67□□□□□ -0.86
TRIM40-208ENST00000489892 C12orf77C9JDV5 145 aa9.67□□□□□ -0.86
TRIM40-208ENST00000489892 DVL1O14640 695 aa9.67□□□□□ -0.86
TRIM40-208ENST00000489892 TUSC2O75896 110 aa9.67□□□□□ -0.86
TRIM40-208ENST00000489892 JTBO76095 146 aa9.67□□□□□ -0.86
TRIM40-208ENST00000489892 ATP5J2P56134 94 aa9.67□□□□□ -0.86
TRIM40-208ENST00000489892 MSMO1Q15800 293 aa9.67□□□□□ -0.86
TRIM40-208ENST00000489892 TUSC1Q2TAM9 212 aa9.67□□□□□ -0.86
TRIM40-208ENST00000489892 Q3ZCU0 254 aa9.67□□□□□ -0.86
TRIM40-208ENST00000489892 IGSF11Q5DX21 431 aa9.67□□□□□ -0.86
TRIM40-208ENST00000489892 CLEC2AQ6UVW9 174 aa9.67□□□□□ -0.86
TRIM40-208ENST00000489892 H1FOOQ8IZA3 346 aaPredicted RBP9.67□□□□□ -0.86
TRIM40-208ENST00000489892 SPAG16Q8N0X2 631 aa9.67□□□□□ -0.86
TRIM40-208ENST00000489892 OR52M1Q8NGK5 317 aa9.67□□□□□ -0.86
TRIM40-208ENST00000489892 OR13A1Q8NGR1 328 aa9.67□□□□□ -0.86
TRIM40-208ENST00000489892 PIMREGQ9BSJ6 248 aa9.67□□□□□ -0.86
TRIM40-208ENST00000489892 TOLLIPQ9H0E2 274 aa9.67□□□□□ -0.86
TRIM40-208ENST00000489892 NAA60Q9H7X0 242 aa9.67□□□□□ -0.86
TRIM40-208ENST00000489892 LINC00574Q9H8X3 128 aa9.67□□□□□ -0.86
TRIM40-208ENST00000489892 OR2S2Q9NQN1 319 aa9.67□□□□□ -0.86
TRIM40-208ENST00000489892 CLN8Q9UBY8 286 aa9.67□□□□□ -0.86
TRIM40-208ENST00000489892 E5RGE8 158 aa9.66□□□□□ -0.86
TRIM40-208ENST00000489892 F2RL2O00254 374 aa9.66□□□□□ -0.86
TRIM40-208ENST00000489892 ITGB1BP1O14713 200 aa9.66□□□□□ -0.86
TRIM40-208ENST00000489892 DEDDO75618 318 aa9.66□□□□□ -0.86
TRIM40-208ENST00000489892 RBP4P02753 201 aa9.66□□□□□ -0.86
TRIM40-208ENST00000489892 AADACP22760 399 aa9.66□□□□□ -0.86
TRIM40-208ENST00000489892 RAB7AP51149 207 aa9.66□□□□□ -0.86
TRIM40-208ENST00000489892 KRTAP10-9P60411 292 aa9.66□□□□□ -0.86
TRIM40-208ENST00000489892 RND3P61587 244 aa9.66□□□□□ -0.86
TRIM40-208ENST00000489892 HOXA4Q00056 320 aaPredicted RBP9.66□□□□□ -0.86
TRIM40-208ENST00000489892 RAB32Q13637 225 aa9.66□□□□□ -0.86
TRIM40-208ENST00000489892 IAH1Q2TAA2 248 aaPredicted RBP9.66□□□□□ -0.86
TRIM40-208ENST00000489892 Q6ZPA2 131 aa9.66□□□□□ -0.86
TRIM40-208ENST00000489892 LGI3Q8N145 548 aa9.66□□□□□ -0.86
TRIM40-208ENST00000489892 SVBPQ8N300 66 aa9.66□□□□□ -0.86
TRIM40-208ENST00000489892 PRR18Q8N4B5 295 aa9.66□□□□□ -0.86
TRIM40-208ENST00000489892 FAM71E2Q8N5Q1 922 aa9.66□□□□□ -0.86
TRIM40-208ENST00000489892 COMMD1Q8N668 190 aa9.66□□□□□ -0.86
TRIM40-208ENST00000489892 ZBTB34Q8NCN2 500 aa9.66□□□□□ -0.86
TRIM40-208ENST00000489892 H1FXQ92522 213 aaKnown RBP9.66□□□□□ -0.86
TRIM40-208ENST00000489892 AKR1E2Q96JD6 320 aa9.66□□□□□ -0.86
TRIM40-208ENST00000489892 ZNF714Q96N38 554 aa9.66□□□□□ -0.86
TRIM40-208ENST00000489892 SPIN2AQ99865 258 aa9.66□□□□□ -0.86
TRIM40-208ENST00000489892 SPIN2BQ9BPZ2 258 aa9.66□□□□□ -0.86
TRIM40-208ENST00000489892 SLC5A7Q9GZV3 580 aa9.66□□□□□ -0.86
TRIM40-208ENST00000489892 PATZ1Q9HBE1 687 aaKnown RBP9.66□□□□□ -0.86
TRIM40-208ENST00000489892 ZC4H2Q9NQZ6 224 aa9.66□□□□□ -0.86
TRIM40-208ENST00000489892 CYTL1Q9NRR1 136 aa9.66□□□□□ -0.86
TRIM40-208ENST00000489892 BEX4Q9NWD9 120 aaPredicted RBP9.66□□□□□ -0.86
TRIM40-208ENST00000489892 CALYQ9NYX4 217 aa9.66□□□□□ -0.86
TRIM40-208ENST00000489892 GNG12Q9UBI6 72 aa9.66□□□□□ -0.86
TRIM40-208ENST00000489892 NSG2Q9Y328 171 aa9.66□□□□□ -0.86
TRIM40-208ENST00000489892 RBM7Q9Y580 266 aaKnown RBP9.66□□□□□ -0.86
TRIM40-208ENST00000489892 BORCS7-ASMTA0A0B4J1R7 106 aa9.65□□□□□ -0.86
TRIM40-208ENST00000489892 RNF212BA8MTL3 300 aa9.65□□□□□ -0.86
TRIM40-208ENST00000489892 LYNX1G3V0Z9 82 aa9.65□□□□□ -0.86
TRIM40-208ENST00000489892 C15orf65H3BRN8 121 aa9.65□□□□□ -0.86
TRIM40-208ENST00000489892 K7EPK0 472 aa9.65□□□□□ -0.86
TRIM40-208ENST00000489892 GPR31O00270 319 aa9.65□□□□□ -0.86
TRIM40-208ENST00000489892 YPEL1O60688 119 aa9.65□□□□□ -0.86
TRIM40-208ENST00000489892 ADAP1O75689 374 aa9.65□□□□□ -0.86
TRIM40-208ENST00000489892 LYNX1P0DP58 116 aa9.65□□□□□ -0.86
TRIM40-208ENST00000489892 CEACAM6P40199 344 aa9.65□□□□□ -0.86
TRIM40-208ENST00000489892 FXYD4P59646 89 aa9.65□□□□□ -0.86
TRIM40-208ENST00000489892 GNB2P62879 340 aa9.65□□□□□ -0.86
TRIM40-208ENST00000489892 ZNF273Q14593 569 aa9.65□□□□□ -0.86
TRIM40-208ENST00000489892 HERPUD1Q15011 391 aa9.65□□□□□ -0.86
TRIM40-208ENST00000489892 AVPI1Q5T686 147 aa9.65□□□□□ -0.86
TRIM40-208ENST00000489892 GPR157Q5UAW9 335 aa9.65□□□□□ -0.86
TRIM40-208ENST00000489892 SPNS3Q6ZMD2 512 aa9.65□□□□□ -0.86
TRIM40-208ENST00000489892 LIAT1Q6ZQX7 453 aa9.65□□□□□ -0.86
TRIM40-208ENST00000489892 OR10V1Q8NGI7 309 aa9.65□□□□□ -0.86
TRIM40-208ENST00000489892 FAM168AQ92567 244 aa9.65□□□□□ -0.86
TRIM40-208ENST00000489892 TOMM40LQ969M1 308 aa9.65□□□□□ -0.86
TRIM40-208ENST00000489892 SMIM8Q96KF7 97 aa9.65□□□□□ -0.86
TRIM40-208ENST00000489892 YPEL2Q96QA6 119 aa9.65□□□□□ -0.86
TRIM40-208ENST00000489892 NKX6-2Q9C056 277 aaPredicted RBP9.65□□□□□ -0.86
TRIM40-208ENST00000489892 CARHSP1Q9Y2V2 147 aaKnown RBP9.65□□□□□ -0.86
TRIM40-208ENST00000489892 TMED3Q9Y3Q3 217 aa9.65□□□□□ -0.86
TRIM40-208ENST00000489892 AKAP6Q13023 2319 aa9.65□□□□□ -0.87
TRIM40-208ENST00000489892 KIAA2026Q5HYC2 2103 aa9.64□□□□□ -0.87
TRIM40-208ENST00000489892 IGKV1-6A0A0C4DH72 117 aa9.64□□□□□ -0.87
TRIM40-208ENST00000489892 H0YIZ8 118 aa9.64□□□□□ -0.87
TRIM40-208ENST00000489892 SCO1O75880 301 aa9.64□□□□□ -0.87
TRIM40-208ENST00000489892 CDS2O95674 445 aa9.64□□□□□ -0.87
TRIM40-208ENST00000489892 IGHV4-39P01824 125 aa9.64□□□□□ -0.87
TRIM40-208ENST00000489892 APOC3P02656 99 aa9.64□□□□□ -0.87
TRIM40-208ENST00000489892 TFF1P04155 84 aa9.64□□□□□ -0.87
TRIM40-208ENST00000489892 HOXB5P09067 269 aa9.64□□□□□ -0.87
TRIM40-208ENST00000489892 WNT2P09544 360 aa9.64□□□□□ -0.87
TRIM40-208ENST00000489892 SELLP14151 372 aa9.64□□□□□ -0.87
TRIM40-208ENST00000489892 SSTR5P35346 364 aa9.64□□□□□ -0.87
TRIM40-208ENST00000489892 SULT1A2P50226 295 aa9.64□□□□□ -0.87
TRIM40-208ENST00000489892 RAB5CP51148 216 aa9.64□□□□□ -0.87
TRIM40-208ENST00000489892 PIGPP57054 158 aa9.64□□□□□ -0.87
TRIM40-208ENST00000489892 S100A10P60903 97 aa9.64□□□□□ -0.87
TRIM40-208ENST00000489892 PJVKQ0ZLH3 352 aa9.64□□□□□ -0.87
TRIM40-208ENST00000489892 TMEM187Q14656 261 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms