RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 CBX3Q13185 183 aa5.53□□□□□ -1.52
COL9A1-209ENST00000489861 LSAMPQ13449 338 aa5.53□□□□□ -1.52
COL9A1-209ENST00000489861 PLGLAQ15195 96 aa5.53□□□□□ -1.52
COL9A1-209ENST00000489861 MED22Q15528 200 aa5.53□□□□□ -1.52
COL9A1-209ENST00000489861 MOGAT2Q3SYC2 334 aa5.53□□□□□ -1.52
COL9A1-209ENST00000489861 ACSM3Q53FZ2 586 aa5.53□□□□□ -1.52
COL9A1-209ENST00000489861 RBM48Q5RL73 367 aaKnown RBP5.53□□□□□ -1.52
COL9A1-209ENST00000489861 C6orf141Q5SZD1 244 aa5.53□□□□□ -1.52
COL9A1-209ENST00000489861 XAF1Q6GPH4 301 aa5.53□□□□□ -1.52
COL9A1-209ENST00000489861 Q8N6K4 173 aa5.53□□□□□ -1.52
COL9A1-209ENST00000489861 ZFP41Q8N8Y5 198 aa5.53□□□□□ -1.52
COL9A1-209ENST00000489861 OR2AK2Q8NG84 335 aa5.53□□□□□ -1.52
COL9A1-209ENST00000489861 OR6M1Q8NGM8 313 aa5.53□□□□□ -1.52
COL9A1-209ENST00000489861 CCDC107Q8WV48 283 aa5.53□□□□□ -1.52
COL9A1-209ENST00000489861 LEAP2Q969E1 77 aa5.53□□□□□ -1.52
COL9A1-209ENST00000489861 Q96M66 194 aa5.53□□□□□ -1.52
COL9A1-209ENST00000489861 RNF5Q99942 180 aa5.53□□□□□ -1.52
COL9A1-209ENST00000489861 ELOVL1Q9BW60 279 aa5.53□□□□□ -1.52
COL9A1-209ENST00000489861 TMEM59Q9BXS4 323 aa5.53□□□□□ -1.52
COL9A1-209ENST00000489861 ALX4Q9H161 411 aaPredicted RBP5.53□□□□□ -1.52
COL9A1-209ENST00000489861 KLK15Q9H2R5 256 aa5.53□□□□□ -1.52
COL9A1-209ENST00000489861 CHMP1AQ9HD42 196 aaPredicted RBP5.53□□□□□ -1.52
COL9A1-209ENST00000489861 FKBP14Q9NWM8 211 aa5.53□□□□□ -1.52
COL9A1-209ENST00000489861 IGHV3-72A0A0B4J1Y9 119 aa5.52□□□□□ -1.53
COL9A1-209ENST00000489861 TRAV41A0A0B4J266 112 aa5.52□□□□□ -1.53
COL9A1-209ENST00000489861 A0A0J9YWU9 116 aa5.52□□□□□ -1.53
COL9A1-209ENST00000489861 PDCD5O14737 125 aa5.52□□□□□ -1.53
COL9A1-209ENST00000489861 RGS10O43665 173 aa5.52□□□□□ -1.53
COL9A1-209ENST00000489861 SPDEFO95238 335 aa5.52□□□□□ -1.53
COL9A1-209ENST00000489861 LALBAP00709 142 aa5.52□□□□□ -1.53
COL9A1-209ENST00000489861 IGHV3-7P01780 117 aa5.52□□□□□ -1.53
COL9A1-209ENST00000489861 HBZP02008 142 aa5.52□□□□□ -1.53
COL9A1-209ENST00000489861 GSTP1P09211 210 aaKnown RBP5.52□□□□□ -1.53
COL9A1-209ENST00000489861 OR8U9P0C7N5 309 aa5.52□□□□□ -1.53
COL9A1-209ENST00000489861 HTR2CP28335 458 aa5.52□□□□□ -1.53
COL9A1-209ENST00000489861 PITPNAQ00169 270 aa5.52□□□□□ -1.53
COL9A1-209ENST00000489861 ARL6IP1Q15041 203 aa5.52□□□□□ -1.53
COL9A1-209ENST00000489861 TATDN3Q17R31 274 aa5.52□□□□□ -1.53
COL9A1-209ENST00000489861 MORN2Q502X0 79 aa5.52□□□□□ -1.53
COL9A1-209ENST00000489861 C4orf48Q5BLP8 95 aa5.52□□□□□ -1.53
COL9A1-209ENST00000489861 FAM209BQ5JX69 171 aa5.52□□□□□ -1.53
COL9A1-209ENST00000489861 C1orf100Q5SVJ3 147 aa5.52□□□□□ -1.53
COL9A1-209ENST00000489861 ZNF660Q6AZW8 331 aaPredicted RBP5.52□□□□□ -1.53
COL9A1-209ENST00000489861 LIN54Q6MZP7 749 aa5.52□□□□□ -1.53
COL9A1-209ENST00000489861 CEACAM19Q7Z692 300 aa5.52□□□□□ -1.53
COL9A1-209ENST00000489861 GAPTQ8N292 157 aa5.52□□□□□ -1.53
COL9A1-209ENST00000489861 PRR18Q8N4B5 295 aa5.52□□□□□ -1.53
COL9A1-209ENST00000489861 ZNF491Q8N8L2 437 aa5.52□□□□□ -1.53
COL9A1-209ENST00000489861 TMEM104Q8NE00 496 aa5.52□□□□□ -1.53
COL9A1-209ENST00000489861 OR13C5Q8NGS8 318 aa5.52□□□□□ -1.53
COL9A1-209ENST00000489861 OR4K15Q8NH41 348 aa5.52□□□□□ -1.53
COL9A1-209ENST00000489861 ABHD5Q8WTS1 349 aa5.52□□□□□ -1.53
COL9A1-209ENST00000489861 TMEM68Q96MH6 324 aa5.52□□□□□ -1.53
COL9A1-209ENST00000489861 KCTD7Q96MP8 289 aa5.52□□□□□ -1.53
COL9A1-209ENST00000489861 OR4C12Q96R67 309 aa5.52□□□□□ -1.53
COL9A1-209ENST00000489861 BANF2Q9H503 90 aa5.52□□□□□ -1.53
COL9A1-209ENST00000489861 SLA2Q9H6Q3 261 aa5.52□□□□□ -1.53
COL9A1-209ENST00000489861 PLGRKTQ9HBL7 147 aa5.52□□□□□ -1.53
COL9A1-209ENST00000489861 TAF9BQ9HBM6 251 aa5.52□□□□□ -1.53
COL9A1-209ENST00000489861 ACOT13Q9NPJ3 140 aa5.52□□□□□ -1.53
COL9A1-209ENST00000489861 PARP11Q9NR21 331 aa5.52□□□□□ -1.53
COL9A1-209ENST00000489861 MBNL3Q9NUK0 354 aaKnown RBP5.52□□□□□ -1.53
COL9A1-209ENST00000489861 PLEKHJ1Q9NW61 149 aa5.52□□□□□ -1.53
COL9A1-209ENST00000489861 AGRNO00468 2067 aa5.52□□□□□ -1.53
COL9A1-209ENST00000489861 IGHV3-43A0A0B4J1X8 118 aa5.51□□□□□ -1.53
COL9A1-209ENST00000489861 A0A0G2JLM5 398 aa5.51□□□□□ -1.53
COL9A1-209ENST00000489861 A0A1W2PPE3 182 aa5.51□□□□□ -1.53
COL9A1-209ENST00000489861 A0A1W2PPK0 400 aa5.51□□□□□ -1.53
COL9A1-209ENST00000489861 UBE2QL1A1L167 161 aa5.51□□□□□ -1.53
COL9A1-209ENST00000489861 LINC01619G3V211 115 aa5.51□□□□□ -1.53
COL9A1-209ENST00000489861 ITGB1BP1O14713 200 aa5.51□□□□□ -1.53
COL9A1-209ENST00000489861 SLC22A1O15245 554 aa5.51□□□□□ -1.53
COL9A1-209ENST00000489861 XRCC3O43542 346 aa5.51□□□□□ -1.53
COL9A1-209ENST00000489861 MRPS14O60783 128 aaKnown RBP5.51□□□□□ -1.53
COL9A1-209ENST00000489861 APOA2P02652 100 aa5.51□□□□□ -1.53
COL9A1-209ENST00000489861 GNAO1P09471 354 aa5.51□□□□□ -1.53
COL9A1-209ENST00000489861 RBMY1A1P0DJD3 496 aaKnown RBP5.51□□□□□ -1.53
COL9A1-209ENST00000489861 IGHV3-43DP0DP04 118 aa5.51□□□□□ -1.53
COL9A1-209ENST00000489861 ZP3P21754 424 aa5.51□□□□□ -1.53
COL9A1-209ENST00000489861 ACTBP60709 375 aa5.51□□□□□ -1.53
COL9A1-209ENST00000489861 RPS27AP62979 156 aaKnown RBP5.51□□□□□ -1.53
COL9A1-209ENST00000489861 MLLT11Q13015 90 aaPredicted RBP5.51□□□□□ -1.53
COL9A1-209ENST00000489861 C5orf64Q2M2E5 130 aa5.51□□□□□ -1.53
COL9A1-209ENST00000489861 PRSS48Q7RTY5 328 aa5.51□□□□□ -1.53
COL9A1-209ENST00000489861 ZNF439Q8NDP4 499 aa5.51□□□□□ -1.53
COL9A1-209ENST00000489861 OR10V1Q8NGI7 309 aa5.51□□□□□ -1.53
COL9A1-209ENST00000489861 TSNAXQ99598 290 aaKnown RBP5.51□□□□□ -1.53
COL9A1-209ENST00000489861 OVOL2Q9BRP0 275 aa5.51□□□□□ -1.53
COL9A1-209ENST00000489861 TM2D1Q9BX74 207 aa5.51□□□□□ -1.53
COL9A1-209ENST00000489861 ANKRD60Q9BZ19 345 aa5.51□□□□□ -1.53
COL9A1-209ENST00000489861 CCDC90BQ9GZT6 254 aa5.51□□□□□ -1.53
COL9A1-209ENST00000489861 Q9H521 79 aa5.51□□□□□ -1.53
COL9A1-209ENST00000489861 PLEKHA3Q9HB20 300 aa5.51□□□□□ -1.53
COL9A1-209ENST00000489861 FOXA2Q9Y261 457 aaPredicted RBP5.51□□□□□ -1.53
COL9A1-209ENST00000489861 A0A1W2PN81 502 aa5.5□□□□□ -1.53
COL9A1-209ENST00000489861 H3BUA1 57 aa5.5□□□□□ -1.53
COL9A1-209ENST00000489861 H7C2Y5 167 aa5.5□□□□□ -1.53
COL9A1-209ENST00000489861 SLC17A2O00624 439 aa5.5□□□□□ -1.53
COL9A1-209ENST00000489861 ATP6V0E1O15342 81 aa5.5□□□□□ -1.53
COL9A1-209ENST00000489861 CREBL2O60519 120 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms