RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 GLI4P10075 376 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 SLC25A6P12236 298 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 MYF5P13349 255 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 VDAC1P21796 283 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 CBLN1P23435 193 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 S100GP29377 79 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 RAB9AP51151 201 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 ZNF83P51522 516 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 FOXL2P58012 376 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 FXYD4P59646 89 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 RAC3P60763 192 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 CKS1BP61024 79 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 RPS15AP62244 130 aaKnown RBP4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 FAM53BQ14153 422 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 NMSQ5H8A3 153 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 PHYHD1Q5SRE7 291 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 WDR82Q6UXN9 313 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 COLCA1Q6ZS62 124 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 UBALD2Q8IYN6 164 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 RPP25LQ8N5L8 163 aaKnown RBP4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 ZNF525Q8N782 197 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 SCCPDHQ8NBX0 429 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 OR5A2Q8NGI9 324 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 OR10G8Q8NGN5 311 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 SPACA5Q96QH8 159 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 OR2V2Q96R30 315 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 SFXN3Q9BWM7 321 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 IL36BQ9NZH7 164 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 KLHL13Q9P2N7 655 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 SPACA6W5XKT8 324 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 TRAV36DV7A0A075B6V5 113 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 TRAV26-1A0A087WT03 109 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 LIPT2A6NK58 231 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 F2Z2F3 143 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 FOXS1O43638 330 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 MT-ATP6P00846 226 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 CGAP01215 116 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 IGHMP01871 453 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 C1QTNF9P0C862 333 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 SLC35E2P0CK97 266 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 IGLL1P15814 213 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 NPPCP23582 126 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 GUCA1AP43080 201 aaPredicted RBP4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 REG1BP48304 166 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 HERV-K104P61576 105 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 HBG1P69891 147 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 HBG2P69892 147 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 SLAQ13239 276 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 PDGFRLQ15198 375 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 RNPS1Q15287 305 aaKnown RBP4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 IGFBP7Q16270 282 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 SGCBQ16585 318 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 HLA-BQ31612 363 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 MRPL54Q6P161 138 aaKnown RBP4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 ERASQ7Z444 233 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 C6orf201Q7Z4U5 140 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 VN1R4Q7Z5H5 301 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 HAPLN4Q86UW8 402 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 WDR5BQ86VZ2 330 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 UEVLDQ8IX04 471 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 CMTM8Q8IZV2 173 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 OR10V1Q8NGI7 309 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 OR4C3Q8NH37 302 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 OR51E1Q8TCB6 317 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 TM4SF19Q96DZ7 209 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 COX14Q96I36 57 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 CYYR1Q96J86 154 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 CCDC3Q9BQI4 270 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 CHRDL1Q9BU40 450 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 CLEC7AQ9BXN2 247 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 FAM60AQ9NP50 221 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 PLEK2Q9NYT0 353 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 TAAR3PQ9P1P4 343 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 INSL6Q9Y581 213 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 TRPM6Q9BX84 2022 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 MUC21A0A0G2JKD1 596 aa4.04□□□□□ -1.76
SNRNP40-206ENST00000489853 MUC21A0A140T8X8 626 aa4.04□□□□□ -1.76
SNRNP40-206ENST00000489853 C11orf94C9JXX5 98 aa4.04□□□□□ -1.76
SNRNP40-206ENST00000489853 C11orf98E9PRG8 122 aa4.04□□□□□ -1.76
SNRNP40-206ENST00000489853 PAGE4O60829 102 aa4.04□□□□□ -1.76
SNRNP40-206ENST00000489853 NUDT14O95848 222 aa4.04□□□□□ -1.76
SNRNP40-206ENST00000489853 PMCHP20382 165 aa4.04□□□□□ -1.76
SNRNP40-206ENST00000489853 CCL1P22362 96 aa4.04□□□□□ -1.76
SNRNP40-206ENST00000489853 CCNOP22674 350 aa4.04□□□□□ -1.76
SNRNP40-206ENST00000489853 PEBP1P30086 187 aaKnown RBP4.04□□□□□ -1.76
SNRNP40-206ENST00000489853 NTSR1P30989 418 aa4.04□□□□□ -1.76
SNRNP40-206ENST00000489853 OR1D5P58170 312 aa4.04□□□□□ -1.76
SNRNP40-206ENST00000489853 PSG4Q00888 419 aa4.04□□□□□ -1.76
SNRNP40-206ENST00000489853 KISS1Q15726 138 aa4.04□□□□□ -1.76
SNRNP40-206ENST00000489853 MLF2Q15773 248 aaPredicted RBP4.04□□□□□ -1.76
SNRNP40-206ENST00000489853 TBR1Q16650 682 aa4.04□□□□□ -1.76
SNRNP40-206ENST00000489853 TMEM249Q2WGJ8 235 aa4.04□□□□□ -1.76
SNRNP40-206ENST00000489853 DEFB134Q4QY38 66 aa4.04□□□□□ -1.76
SNRNP40-206ENST00000489853 TCTEX1D4Q5JR98 221 aa4.04□□□□□ -1.76
SNRNP40-206ENST00000489853 MUC21Q5SSG8 566 aa4.04□□□□□ -1.76
SNRNP40-206ENST00000489853 DCAF12Q5T6F0 453 aa4.04□□□□□ -1.76
SNRNP40-206ENST00000489853 SLC25A34Q6PIV7 304 aa4.04□□□□□ -1.76
SNRNP40-206ENST00000489853 C1QL2Q7Z5L3 287 aa4.04□□□□□ -1.76
SNRNP40-206ENST00000489853 ZNF439Q8NDP4 499 aa4.04□□□□□ -1.76
SNRNP40-206ENST00000489853 TSKUQ8WUA8 353 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms