RNA–Protein interactions for RNA: ENST00000489629.1

CPSF3-205, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 3

Gene CPSF3, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-205ENST00000489629 SDIM1Q6ZPB5 146 aa0.93□□□□□ -2.26
CPSF3-205ENST00000489629 OR10P1Q8NGE3 313 aa0.93□□□□□ -2.26
CPSF3-205ENST00000489629 OR8K1Q8NGG5 319 aa0.93□□□□□ -2.26
CPSF3-205ENST00000489629 EEF1AKMT1Q8WVE0 214 aa0.93□□□□□ -2.26
CPSF3-205ENST00000489629 ABHD14BQ96IU4 210 aa0.93□□□□□ -2.26
CPSF3-205ENST00000489629 ARL5BQ96KC2 179 aa0.93□□□□□ -2.26
CPSF3-205ENST00000489629 MED18Q9BUE0 208 aa0.93□□□□□ -2.26
CPSF3-205ENST00000489629 TIPINQ9BVW5 301 aa0.93□□□□□ -2.26
CPSF3-205ENST00000489629 DRC3Q9H069 523 aa0.93□□□□□ -2.26
CPSF3-205ENST00000489629 MED28Q9H204 178 aa0.93□□□□□ -2.26
CPSF3-205ENST00000489629 MAP1LC3AQ9H492 121 aa0.93□□□□□ -2.26
CPSF3-205ENST00000489629 MRPL16Q9NX20 251 aaKnown RBP0.93□□□□□ -2.26
CPSF3-205ENST00000489629 VPREB3Q9UKI3 123 aa0.93□□□□□ -2.26
CPSF3-205ENST00000489629 ALG5Q9Y673 324 aa0.93□□□□□ -2.26
CPSF3-205ENST00000489629 MINOS1-NBL1R4GNA1 71 aa0.93□□□□□ -2.26
CPSF3-205ENST00000489629 HSPE1-MOB4S4R3N1 261 aa0.93□□□□□ -2.26
CPSF3-205ENST00000489629 SLX4Q8IY92 1834 aa0.93□□□□□ -2.26
CPSF3-205ENST00000489629 BAHCC1Q9P281 2608 aa0.93□□□□□ -2.26
CPSF3-205ENST00000489629 ADCY9O60503 1353 aa0.93□□□□□ -2.26
CPSF3-205ENST00000489629 HEATR5AQ86XA9 2040 aa0.93□□□□□ -2.26
CPSF3-205ENST00000489629 HECW2Q9P2P5 1572 aa0.92□□□□□ -2.26
CPSF3-205ENST00000489629 PKD1L2Q7Z442 2459 aa0.92□□□□□ -2.26
CPSF3-205ENST00000489629 THSD7AQ9UPZ6 1657 aa0.92□□□□□ -2.26
CPSF3-205ENST00000489629 NCKAP5O14513 1909 aa0.92□□□□□ -2.26
CPSF3-205ENST00000489629 PTPRSQ13332 1948 aa0.92□□□□□ -2.26
CPSF3-205ENST00000489629 A0A0A6YYH2 397 aa0.92□□□□□ -2.26
CPSF3-205ENST00000489629 A6NJ64 397 aa0.92□□□□□ -2.26
CPSF3-205ENST00000489629 A8MWP6 167 aa0.92□□□□□ -2.26
CPSF3-205ENST00000489629 C21orf140B9A014 251 aa0.92□□□□□ -2.26
CPSF3-205ENST00000489629 CXCR6O00574 342 aa0.92□□□□□ -2.26
CPSF3-205ENST00000489629 ZW10O43264 779 aa0.92□□□□□ -2.26
CPSF3-205ENST00000489629 DENRO43583 198 aaKnown RBP0.92□□□□□ -2.26
CPSF3-205ENST00000489629 IL6P05231 212 aa0.92□□□□□ -2.26
CPSF3-205ENST00000489629 C8orf88P0DMB2 117 aa0.92□□□□□ -2.26
CPSF3-205ENST00000489629 CCL3P10147 92 aa0.92□□□□□ -2.26
CPSF3-205ENST00000489629 ESDP10768 282 aa0.92□□□□□ -2.26
CPSF3-205ENST00000489629 CD36P16671 472 aa0.92□□□□□ -2.26
CPSF3-205ENST00000489629 CFL1P23528 166 aaKnown RBP0.92□□□□□ -2.26
CPSF3-205ENST00000489629 RPS12P25398 132 aaKnown RBP0.92□□□□□ -2.26
CPSF3-205ENST00000489629 OR10J1P30954 320 aa0.92□□□□□ -2.26
CPSF3-205ENST00000489629 SERPINB10P48595 397 aa0.92□□□□□ -2.26
CPSF3-205ENST00000489629 CTBP2P56545 445 aa0.92□□□□□ -2.26
CPSF3-205ENST00000489629 MED21Q13503 144 aa0.92□□□□□ -2.26
CPSF3-205ENST00000489629 HES1Q14469 280 aa0.92□□□□□ -2.26
CPSF3-205ENST00000489629 ZNF181Q2M3W8 571 aa0.92□□□□□ -2.26
CPSF3-205ENST00000489629 SLC36A2Q495M3 483 aa0.92□□□□□ -2.26
CPSF3-205ENST00000489629 CST9Q5W186 159 aa0.92□□□□□ -2.26
CPSF3-205ENST00000489629 SCGB1D4Q6XE38 83 aa0.92□□□□□ -2.26
CPSF3-205ENST00000489629 NAA40Q86UY6 237 aa0.92□□□□□ -2.26
CPSF3-205ENST00000489629 TMEM161BQ8NDZ6 487 aa0.92□□□□□ -2.26
CPSF3-205ENST00000489629 OR5C1Q8NGR4 320 aa0.92□□□□□ -2.26
CPSF3-205ENST00000489629 OR51H1Q8NH63 302 aa0.92□□□□□ -2.26
CPSF3-205ENST00000489629 ERMNQ8TAM6 284 aa0.92□□□□□ -2.26
CPSF3-205ENST00000489629 CYGBQ8WWM9 190 aa0.92□□□□□ -2.26
CPSF3-205ENST00000489629 TLCD1Q96CP7 247 aa0.92□□□□□ -2.26
CPSF3-205ENST00000489629 OR7D2Q96RA2 312 aa0.92□□□□□ -2.26
CPSF3-205ENST00000489629 TBX5Q99593 518 aa0.92□□□□□ -2.26
CPSF3-205ENST00000489629 C11orf1Q9H5F2 150 aa0.92□□□□□ -2.26
CPSF3-205ENST00000489629 UBAP1Q9NZ09 502 aa0.92□□□□□ -2.26
CPSF3-205ENST00000489629 DNAJC12Q9UKB3 198 aa0.92□□□□□ -2.26
CPSF3-205ENST00000489629 SNX10Q9Y5X0 201 aa0.92□□□□□ -2.26
CPSF3-205ENST00000489629 A0A1W2PP64 1363 aa0.92□□□□□ -2.26
CPSF3-205ENST00000489629 PTPRBP23467 1997 aa0.92□□□□□ -2.26
CPSF3-205ENST00000489629 SIPA1L1O43166 1804 aa0.92□□□□□ -2.26
CPSF3-205ENST00000489629 VWDEQ8N2E2 1590 aa0.91□□□□□ -2.26
CPSF3-205ENST00000489629 CCDC88AQ3V6T2 1871 aa0.91□□□□□ -2.26
CPSF3-205ENST00000489629 LINC00862A6NCI5 91 aa0.91□□□□□ -2.26
CPSF3-205ENST00000489629 M0QZ92 97 aa0.91□□□□□ -2.26
CPSF3-205ENST00000489629 TP53I11O14683 189 aa0.91□□□□□ -2.26
CPSF3-205ENST00000489629 PFDN6O15212 129 aa0.91□□□□□ -2.26
CPSF3-205ENST00000489629 STK16O75716 305 aa0.91□□□□□ -2.26
CPSF3-205ENST00000489629 ZNF189O75820 626 aaPredicted RBP0.91□□□□□ -2.26
CPSF3-205ENST00000489629 LY6HO94772 140 aa0.91□□□□□ -2.26
CPSF3-205ENST00000489629 ZNF7P17097 686 aaPredicted RBP0.91□□□□□ -2.26
CPSF3-205ENST00000489629 GZMHP20718 246 aa0.91□□□□□ -2.26
CPSF3-205ENST00000489629 CCL1P22362 96 aa0.91□□□□□ -2.26
CPSF3-205ENST00000489629 RPL12P30050 165 aaKnown RBP0.91□□□□□ -2.26
CPSF3-205ENST00000489629 OPRM1P35372 400 aa0.91□□□□□ -2.26
CPSF3-205ENST00000489629 CD79BP40259 229 aa0.91□□□□□ -2.26
CPSF3-205ENST00000489629 KRTAP12-1P59990 96 aa0.91□□□□□ -2.26
CPSF3-205ENST00000489629 RPS24P62847 133 aaKnown RBP0.91□□□□□ -2.26
CPSF3-205ENST00000489629 SLC35A2P78381 396 aa0.91□□□□□ -2.26
CPSF3-205ENST00000489629 GNA13Q14344 377 aa0.91□□□□□ -2.26
CPSF3-205ENST00000489629 SPIN4Q56A73 249 aa0.91□□□□□ -2.26
CPSF3-205ENST00000489629 TMEM31Q5JXX7 168 aa0.91□□□□□ -2.26
CPSF3-205ENST00000489629 C1orf194Q5T5A4 169 aa0.91□□□□□ -2.26
CPSF3-205ENST00000489629 ZNF322Q6U7Q0 402 aaPredicted RBP0.91□□□□□ -2.26
CPSF3-205ENST00000489629 Q6ZS52 159 aa0.91□□□□□ -2.26
CPSF3-205ENST00000489629 COMMD7Q86VX2 200 aa0.91□□□□□ -2.26
CPSF3-205ENST00000489629 CCDC112Q8NEF3 446 aa0.91□□□□□ -2.26
CPSF3-205ENST00000489629 OR11H1Q8NG94 326 aa0.91□□□□□ -2.26
CPSF3-205ENST00000489629 Q8WTZ3 238 aa0.91□□□□□ -2.26
CPSF3-205ENST00000489629 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP0.91□□□□□ -2.26
CPSF3-205ENST00000489629 TMEM109Q9BVC6 243 aa0.91□□□□□ -2.26
CPSF3-205ENST00000489629 BCL2L14Q9BZR8 327 aa0.91□□□□□ -2.26
CPSF3-205ENST00000489629 AICDAQ9GZX7 198 aa0.91□□□□□ -2.26
CPSF3-205ENST00000489629 PARVGQ9HBI0 331 aa0.91□□□□□ -2.26
CPSF3-205ENST00000489629 XPNPEP1Q9NQW7 623 aa0.91□□□□□ -2.26
CPSF3-205ENST00000489629 NKIRAS1Q9NYS0 192 aa0.91□□□□□ -2.26
CPSF3-205ENST00000489629 TAS2R9Q9NYW1 312 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms