RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 ACTBL2Q562R1 376 aa6.58□□□□□ -1.36
PRKCB-208ENST00000487674 RPL39P5Q59GN2 51 aa6.58□□□□□ -1.36
PRKCB-208ENST00000487674 C1orf100Q5SVJ3 147 aa6.58□□□□□ -1.36
PRKCB-208ENST00000487674 GLT8D1Q68CQ7 371 aa6.58□□□□□ -1.36
PRKCB-208ENST00000487674 OR10K2Q6IF99 312 aa6.58□□□□□ -1.36
PRKCB-208ENST00000487674 ZNF880Q6PDB4 577 aa6.58□□□□□ -1.36
PRKCB-208ENST00000487674 GLDNQ6ZMI3 551 aaPredicted RBP6.58□□□□□ -1.36
PRKCB-208ENST00000487674 OVCH2Q7RTZ1 564 aa6.58□□□□□ -1.36
PRKCB-208ENST00000487674 LRRTM1Q86UE6 522 aa6.58□□□□□ -1.36
PRKCB-208ENST00000487674 PPP1R27Q86WC6 154 aa6.58□□□□□ -1.36
PRKCB-208ENST00000487674 C8orf59Q8N0T1 100 aaPredicted RBP6.58□□□□□ -1.36
PRKCB-208ENST00000487674 DHRSXQ8N5I4 330 aa6.58□□□□□ -1.36
PRKCB-208ENST00000487674 OR5AN1Q8NGI8 311 aa6.58□□□□□ -1.36
PRKCB-208ENST00000487674 KCNG3Q8TAE7 436 aa6.58□□□□□ -1.36
PRKCB-208ENST00000487674 CASTOR1Q8WTX7 329 aa6.58□□□□□ -1.36
PRKCB-208ENST00000487674 PHYHIPQ92561 330 aa6.58□□□□□ -1.36
PRKCB-208ENST00000487674 FLYWCH2Q96CP2 140 aaKnown RBP6.58□□□□□ -1.36
PRKCB-208ENST00000487674 RNF5Q99942 180 aa6.58□□□□□ -1.36
PRKCB-208ENST00000487674 FAAP24Q9BTP7 215 aa6.58□□□□□ -1.36
PRKCB-208ENST00000487674 TM2D1Q9BX74 207 aa6.58□□□□□ -1.36
PRKCB-208ENST00000487674 SLA2Q9H6Q3 261 aa6.58□□□□□ -1.36
PRKCB-208ENST00000487674 ZMAT4Q9H898 229 aa6.58□□□□□ -1.36
PRKCB-208ENST00000487674 CHMP1AQ9HD42 196 aaPredicted RBP6.58□□□□□ -1.36
PRKCB-208ENST00000487674 PSORS1C1Q9UIG5 152 aa6.58□□□□□ -1.36
PRKCB-208ENST00000487674 NUBP2Q9Y5Y2 271 aa6.58□□□□□ -1.36
PRKCB-208ENST00000487674 A3GALT2U3KPV4 340 aa6.58□□□□□ -1.36
PRKCB-208ENST00000487674 TRBV6-6A0A0A6YYG2 114 aa6.57□□□□□ -1.36
PRKCB-208ENST00000487674 TRIM64CA6NLI5 447 aa6.57□□□□□ -1.36
PRKCB-208ENST00000487674 H7C2Y5 167 aa6.57□□□□□ -1.36
PRKCB-208ENST00000487674 FCN1O00602 326 aa6.57□□□□□ -1.36
PRKCB-208ENST00000487674 SLC22A1O15245 554 aa6.57□□□□□ -1.36
PRKCB-208ENST00000487674 BPNT1O95861 308 aa6.57□□□□□ -1.36
PRKCB-208ENST00000487674 IGHV3-11P01762 117 aa6.57□□□□□ -1.36
PRKCB-208ENST00000487674 HSPB1P04792 205 aaKnown RBP6.57□□□□□ -1.36
PRKCB-208ENST00000487674 TFAP2AP05549 437 aa6.57□□□□□ -1.36
PRKCB-208ENST00000487674 GSTP1P09211 210 aaKnown RBP6.57□□□□□ -1.36
PRKCB-208ENST00000487674 GNAO1P09471 354 aa6.57□□□□□ -1.36
PRKCB-208ENST00000487674 HTR2CP28335 458 aa6.57□□□□□ -1.36
PRKCB-208ENST00000487674 CD40LGP29965 261 aa6.57□□□□□ -1.36
PRKCB-208ENST00000487674 TPPP2P59282 170 aa6.57□□□□□ -1.36
PRKCB-208ENST00000487674 HLA-DRB3P79483 266 aa6.57□□□□□ -1.36
PRKCB-208ENST00000487674 UNC119Q13432 240 aa6.57□□□□□ -1.36
PRKCB-208ENST00000487674 INSL4Q14641 139 aa6.57□□□□□ -1.36
PRKCB-208ENST00000487674 ACSM3Q53FZ2 586 aa6.57□□□□□ -1.36
PRKCB-208ENST00000487674 RBM48Q5RL73 367 aaKnown RBP6.57□□□□□ -1.36
PRKCB-208ENST00000487674 LAIR2Q6ISS4 152 aa6.57□□□□□ -1.36
PRKCB-208ENST00000487674 UNQ5815/PRO19632Q6UWF5 114 aa6.57□□□□□ -1.36
PRKCB-208ENST00000487674 MS4A15Q8N5U1 240 aa6.57□□□□□ -1.36
PRKCB-208ENST00000487674 NANOGP1Q8N7R0 232 aa6.57□□□□□ -1.36
PRKCB-208ENST00000487674 OR6M1Q8NGM8 313 aa6.57□□□□□ -1.36
PRKCB-208ENST00000487674 SETD6Q8TBK2 473 aa6.57□□□□□ -1.36
PRKCB-208ENST00000487674 FBLIM1Q8WUP2 373 aa6.57□□□□□ -1.36
PRKCB-208ENST00000487674 ABHD14BQ96IU4 210 aa6.57□□□□□ -1.36
PRKCB-208ENST00000487674 OR4C12Q96R67 309 aa6.57□□□□□ -1.36
PRKCB-208ENST00000487674 AGMATQ9BSE5 352 aa6.57□□□□□ -1.36
PRKCB-208ENST00000487674 NICN1Q9BSH3 213 aa6.57□□□□□ -1.36
PRKCB-208ENST00000487674 PARP12Q9H0J9 701 aaKnown RBP6.57□□□□□ -1.36
PRKCB-208ENST00000487674 RIMS4Q9H426 269 aaPredicted RBP6.57□□□□□ -1.36
PRKCB-208ENST00000487674 KCNK15Q9H427 330 aa6.57□□□□□ -1.36
PRKCB-208ENST00000487674 PLCXD1Q9NUJ7 323 aa6.57□□□□□ -1.36
PRKCB-208ENST00000487674 PLEKHJ1Q9NW61 149 aa6.57□□□□□ -1.36
PRKCB-208ENST00000487674 METTL1Q9UBP6 276 aaKnown RBP6.57□□□□□ -1.36
PRKCB-208ENST00000487674 MGAT4AQ9UM21 535 aa6.57□□□□□ -1.36
PRKCB-208ENST00000487674 STUB1Q9UNE7 303 aa6.57□□□□□ -1.36
PRKCB-208ENST00000487674 GAB2Q9UQC2 676 aa6.57□□□□□ -1.36
PRKCB-208ENST00000487674 HUWE1Q7Z6Z7 4374 aaKnown RBP6.57□□□□□ -1.36
PRKCB-208ENST00000487674 DNAH7Q8WXX0 4024 aa6.56□□□□□ -1.36
PRKCB-208ENST00000487674 TMEM14DPA8MWL7 114 aa6.56□□□□□ -1.36
PRKCB-208ENST00000487674 H3BUA1 57 aa6.56□□□□□ -1.36
PRKCB-208ENST00000487674 HSPA12AO43301 675 aa6.56□□□□□ -1.36
PRKCB-208ENST00000487674 CA2P00918 260 aa6.56□□□□□ -1.36
PRKCB-208ENST00000487674 TRGV3P03979 118 aa6.56□□□□□ -1.36
PRKCB-208ENST00000487674 LYL1P12980 280 aa6.56□□□□□ -1.36
PRKCB-208ENST00000487674 CPEP16870 476 aa6.56□□□□□ -1.36
PRKCB-208ENST00000487674 ZBTB25P24278 435 aa6.56□□□□□ -1.36
PRKCB-208ENST00000487674 QRFPP83859 136 aa6.56□□□□□ -1.36
PRKCB-208ENST00000487674 PSG5Q15238 335 aa6.56□□□□□ -1.36
PRKCB-208ENST00000487674 SRSF7Q16629 238 aaKnown RBP eCLIP6.56□□□□□ -1.36
PRKCB-208ENST00000487674 HSD17B12Q53GQ0 312 aa6.56□□□□□ -1.36
PRKCB-208ENST00000487674 ZNF562Q6V9R5 426 aa6.56□□□□□ -1.36
PRKCB-208ENST00000487674 LFNGQ8NES3 379 aa6.56□□□□□ -1.36
PRKCB-208ENST00000487674 PTX4Q96A99 478 aa6.56□□□□□ -1.36
PRKCB-208ENST00000487674 RHOVQ96L33 236 aa6.56□□□□□ -1.36
PRKCB-208ENST00000487674 MS4A10Q96PG2 267 aa6.56□□□□□ -1.36
PRKCB-208ENST00000487674 TSNAXQ99598 290 aaKnown RBP6.56□□□□□ -1.36
PRKCB-208ENST00000487674 TM2D3Q9BRN9 247 aa6.56□□□□□ -1.36
PRKCB-208ENST00000487674 FAM103A1Q9BTL3 118 aaKnown RBP6.56□□□□□ -1.36
PRKCB-208ENST00000487674 TMED9Q9BVK6 235 aa6.56□□□□□ -1.36
PRKCB-208ENST00000487674 ELOVL1Q9BW60 279 aa6.56□□□□□ -1.36
PRKCB-208ENST00000487674 MND1Q9BWT6 205 aa6.56□□□□□ -1.36
PRKCB-208ENST00000487674 C11orf54Q9H0W9 315 aaPredicted RBP6.56□□□□□ -1.36
PRKCB-208ENST00000487674 PALMDQ9NP74 551 aa6.56□□□□□ -1.36
PRKCB-208ENST00000487674 C12orf4Q9NQ89 552 aa6.56□□□□□ -1.36
PRKCB-208ENST00000487674 FKBP14Q9NWM8 211 aa6.56□□□□□ -1.36
PRKCB-208ENST00000487674 OR1A1Q9P1Q5 309 aa6.56□□□□□ -1.36
PRKCB-208ENST00000487674 AK3Q9UIJ7 227 aa6.56□□□□□ -1.36
PRKCB-208ENST00000487674 TENM2Q9NT68 2774 aa6.56□□□□□ -1.36
PRKCB-208ENST00000487674 DYNC2H1Q8NCM8 4307 aaKnown RBP6.56□□□□□ -1.36
PRKCB-208ENST00000487674 A0A0A6YYD4 124 aa6.55□□□□□ -1.36
PRKCB-208ENST00000487674 EBAG9O00559 213 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms