RNA–Protein interactions for RNA: ENST00000487620.1

ZNF3-215, Transcript of zinc finger protein 3, humanhuman

TSL 2

Gene ZNF3, Length 2,660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-215ENST00000487620 FAM53AQ6NSI3 398 aaPredicted RBP8.25□□□□□ -1.09
ZNF3-215ENST00000487620 NUFIP2Q7Z417 695 aaKnown RBP8.25□□□□□ -1.09
ZNF3-215ENST00000487620 OR2M7Q8NG81 312 aa8.25□□□□□ -1.09
ZNF3-215ENST00000487620 RNASEH2CQ8TDP1 164 aaKnown RBP8.25□□□□□ -1.09
ZNF3-215ENST00000487620 ZDHHC16Q969W1 377 aa8.25□□□□□ -1.09
ZNF3-215ENST00000487620 PKIBQ9C010 78 aa8.25□□□□□ -1.09
ZNF3-215ENST00000487620 STRADBQ9C0K7 418 aa8.25□□□□□ -1.09
ZNF3-215ENST00000487620 OR2D2Q9H210 308 aa8.25□□□□□ -1.09
ZNF3-215ENST00000487620 ZNF703Q9H7S9 590 aaPredicted RBP8.25□□□□□ -1.09
ZNF3-215ENST00000487620 TIMM9Q9Y5J7 89 aa8.25□□□□□ -1.09
ZNF3-215ENST00000487620 PCSK5Q92824 1860 aa8.25□□□□□ -1.09
ZNF3-215ENST00000487620 RNF212BA8MTL3 300 aa8.24□□□□□ -1.09
ZNF3-215ENST00000487620 A8MWP6 167 aa8.24□□□□□ -1.09
ZNF3-215ENST00000487620 FAM90A26D6RGX4 464 aa8.24□□□□□ -1.09
ZNF3-215ENST00000487620 NXPH2O95156 264 aa8.24□□□□□ -1.09
ZNF3-215ENST00000487620 MT-CO3P00414 261 aa8.24□□□□□ -1.09
ZNF3-215ENST00000487620 SERPINA7P05543 415 aa8.24□□□□□ -1.09
ZNF3-215ENST00000487620 CEBPDP49716 269 aaPredicted RBP8.24□□□□□ -1.09
ZNF3-215ENST00000487620 NUBP1P53384 320 aa8.24□□□□□ -1.09
ZNF3-215ENST00000487620 FAM3BP58499 235 aaPredicted RBP8.24□□□□□ -1.09
ZNF3-215ENST00000487620 TGIF2LYQ8IUE0 185 aa8.24□□□□□ -1.09
ZNF3-215ENST00000487620 MCEMP1Q8IX19 187 aa8.24□□□□□ -1.09
ZNF3-215ENST00000487620 SCCPDHQ8NBX0 429 aa8.24□□□□□ -1.09
ZNF3-215ENST00000487620 OR10P1Q8NGE3 313 aa8.24□□□□□ -1.09
ZNF3-215ENST00000487620 OR2T10Q8NGZ9 312 aa8.24□□□□□ -1.09
ZNF3-215ENST00000487620 CT55Q8WUE5 264 aa8.24□□□□□ -1.09
ZNF3-215ENST00000487620 RAB24Q969Q5 203 aa8.24□□□□□ -1.09
ZNF3-215ENST00000487620 AURKAIP1Q9NWT8 199 aaPredicted RBP8.24□□□□□ -1.09
ZNF3-215ENST00000487620 B4GALT7Q9UBV7 327 aa8.24□□□□□ -1.09
ZNF3-215ENST00000487620 ODAMA1E959 279 aa8.24□□□□□ -1.09
ZNF3-215ENST00000487620 C1QTNF9BB2RNN3 333 aa8.24□□□□□ -1.09
ZNF3-215ENST00000487620 CDIPTO14735 213 aa8.24□□□□□ -1.09
ZNF3-215ENST00000487620 ZG16O60844 167 aa8.24□□□□□ -1.09
ZNF3-215ENST00000487620 SELEP16581 610 aa8.24□□□□□ -1.09
ZNF3-215ENST00000487620 COX5AP20674 150 aa8.24□□□□□ -1.09
ZNF3-215ENST00000487620 HOXA6P31267 233 aa8.24□□□□□ -1.09
ZNF3-215ENST00000487620 CHRNA7P36544 502 aa8.24□□□□□ -1.09
ZNF3-215ENST00000487620 SSX2Q16385 188 aa8.24□□□□□ -1.09
ZNF3-215ENST00000487620 DCAF12Q5T6F0 453 aa8.24□□□□□ -1.09
ZNF3-215ENST00000487620 WDR86Q86TI4 376 aa8.24□□□□□ -1.09
ZNF3-215ENST00000487620 ZNF709Q8N972 641 aa8.24□□□□□ -1.09
ZNF3-215ENST00000487620 MAFAQ8NHW3 353 aaPredicted RBP8.24□□□□□ -1.09
ZNF3-215ENST00000487620 TMEM170AQ8WVE7 144 aa8.24□□□□□ -1.09
ZNF3-215ENST00000487620 WFIKKN1Q96NZ8 548 aa8.24□□□□□ -1.09
ZNF3-215ENST00000487620 FAM173AQ9BQD7 235 aa8.24□□□□□ -1.09
ZNF3-215ENST00000487620 TMEM147Q9BVK8 224 aa8.24□□□□□ -1.09
ZNF3-215ENST00000487620 RTL8AQ9BWD3 113 aa8.24□□□□□ -1.09
ZNF3-215ENST00000487620 ACTR3CQ9C0K3 210 aaPredicted RBP8.24□□□□□ -1.09
ZNF3-215ENST00000487620 MANBALQ9NQG1 85 aa8.24□□□□□ -1.09
ZNF3-215ENST00000487620 HSPB7Q9UBY9 170 aa8.24□□□□□ -1.09
ZNF3-215ENST00000487620 COL6A3P12111 3177 aa8.23□□□□□ -1.09
ZNF3-215ENST00000487620 MKRN2OSH3BPM6 223 aa8.23□□□□□ -1.09
ZNF3-215ENST00000487620 GALR2O43603 387 aaPredicted RBP8.23□□□□□ -1.09
ZNF3-215ENST00000487620 NEURL1O76050 574 aa8.23□□□□□ -1.09
ZNF3-215ENST00000487620 EGR1P18146 543 aa8.23□□□□□ -1.09
ZNF3-215ENST00000487620 GNB2P62879 340 aa8.23□□□□□ -1.09
ZNF3-215ENST00000487620 RPL30P62888 115 aaKnown RBP8.23□□□□□ -1.09
ZNF3-215ENST00000487620 MSMO1Q15800 293 aa8.23□□□□□ -1.09
ZNF3-215ENST00000487620 BTNL3Q6UXE8 466 aa8.23□□□□□ -1.09
ZNF3-215ENST00000487620 TIPARPQ7Z3E1 657 aaKnown RBP8.23□□□□□ -1.09
ZNF3-215ENST00000487620 MRPL41Q8IXM3 137 aaKnown RBP8.23□□□□□ -1.09
ZNF3-215ENST00000487620 OR1L1Q8NH94 360 aa8.23□□□□□ -1.09
ZNF3-215ENST00000487620 DTD1Q8TEA8 209 aa8.23□□□□□ -1.09
ZNF3-215ENST00000487620 HLA-CQ95604 372 aa8.23□□□□□ -1.09
ZNF3-215ENST00000487620 ANAPC16Q96DE5 110 aa8.23□□□□□ -1.09
ZNF3-215ENST00000487620 NPCDR1Q9BY65 106 aa8.23□□□□□ -1.09
ZNF3-215ENST00000487620 LRRC30A6NM36 301 aa8.23□□□□□ -1.09
ZNF3-215ENST00000487620 C11orf94C9JXX5 98 aa8.23□□□□□ -1.09
ZNF3-215ENST00000487620 SH2D1BO14796 132 aa8.23□□□□□ -1.09
ZNF3-215ENST00000487620 S1PR2O95136 353 aa8.23□□□□□ -1.09
ZNF3-215ENST00000487620 MBP02144 154 aa8.23□□□□□ -1.09
ZNF3-215ENST00000487620 CRYAAP02489 173 aa8.23□□□□□ -1.09
ZNF3-215ENST00000487620 GRPP07492 148 aa8.23□□□□□ -1.09
ZNF3-215ENST00000487620 SELLP14151 372 aa8.23□□□□□ -1.09
ZNF3-215ENST00000487620 RAC2P15153 192 aa8.23□□□□□ -1.09
ZNF3-215ENST00000487620 OR3A1P47881 315 aa8.23□□□□□ -1.09
ZNF3-215ENST00000487620 DUSP3P51452 185 aaPredicted RBP8.23□□□□□ -1.09
ZNF3-215ENST00000487620 UBE2G2P60604 165 aa8.23□□□□□ -1.09
ZNF3-215ENST00000487620 ZXDAP98168 799 aa8.23□□□□□ -1.09
ZNF3-215ENST00000487620 SSPNQ14714 243 aa8.23□□□□□ -1.09
ZNF3-215ENST00000487620 ZNF645Q8N7E2 425 aa8.23□□□□□ -1.09
ZNF3-215ENST00000487620 NEIL1Q96FI4 390 aaPredicted RBP8.23□□□□□ -1.09
ZNF3-215ENST00000487620 ACY3Q96HD9 319 aa8.23□□□□□ -1.09
ZNF3-215ENST00000487620 KCNIP1Q9NZI2 227 aa8.23□□□□□ -1.09
ZNF3-215ENST00000487620 KMT2EQ8IZD2 1858 aa8.23□□□□□ -1.09
ZNF3-215ENST00000487620 GCGP01275 180 aa8.22□□□□□ -1.09
ZNF3-215ENST00000487620 PAX1P15863 534 aa8.22□□□□□ -1.09
ZNF3-215ENST00000487620 ATP6V1FQ16864 119 aa8.22□□□□□ -1.09
ZNF3-215ENST00000487620 Q3ZCU0 254 aa8.22□□□□□ -1.09
ZNF3-215ENST00000487620 COA6Q5JTJ3 125 aaKnown RBP8.22□□□□□ -1.09
ZNF3-215ENST00000487620 ACTL10Q5JWF8 245 aa8.22□□□□□ -1.09
ZNF3-215ENST00000487620 FAM78BQ5VT40 261 aa8.22□□□□□ -1.09
ZNF3-215ENST00000487620 C6orf15Q6UXA7 325 aaPredicted RBP8.22□□□□□ -1.09
ZNF3-215ENST00000487620 CENPVQ7Z7K6 275 aaPredicted RBP8.22□□□□□ -1.09
ZNF3-215ENST00000487620 MDP1Q86V88 176 aa8.22□□□□□ -1.09
ZNF3-215ENST00000487620 OR52L2PQ8NGH6 319 aa8.22□□□□□ -1.09
ZNF3-215ENST00000487620 TMEM18Q96B42 140 aa8.22□□□□□ -1.09
ZNF3-215ENST00000487620 NOL4LQ96MY1 436 aaPredicted RBP8.22□□□□□ -1.09
ZNF3-215ENST00000487620 TTTY12Q9BZ98 90 aa8.22□□□□□ -1.09
ZNF3-215ENST00000487620 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms