RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 IGKV1-13P0DP09 117 aa10.03□□□□□ -0.8
TRA2B-214ENST00000487615 DLK1P80370 383 aa10.03□□□□□ -0.8
TRA2B-214ENST00000487615 ACSF3Q4G176 576 aaPredicted RBP10.03□□□□□ -0.8
TRA2B-214ENST00000487615 TIMM23BQ5SRD1 257 aa10.03□□□□□ -0.8
TRA2B-214ENST00000487615 VSTM2AQ8TAG5 236 aa10.03□□□□□ -0.8
TRA2B-214ENST00000487615 GINS3Q9BRX5 216 aa10.03□□□□□ -0.8
TRA2B-214ENST00000487615 SFXN3Q9BWM7 321 aa10.03□□□□□ -0.8
TRA2B-214ENST00000487615 TMEM56-RWDD3S4R434 201 aa10.03□□□□□ -0.8
TRA2B-214ENST00000487615 FER1L5A0AVI2 2057 aa10.02□□□□□ -0.8
TRA2B-214ENST00000487615 A0A1W2PPE3 182 aa10.02□□□□□ -0.8
TRA2B-214ENST00000487615 C12orf77C9JDV5 145 aa10.02□□□□□ -0.8
TRA2B-214ENST00000487615 IFNL4K9M1U5 179 aa10.02□□□□□ -0.8
TRA2B-214ENST00000487615 FABP1P07148 127 aa10.02□□□□□ -0.8
TRA2B-214ENST00000487615 PGA5P0DJD9 388 aa10.02□□□□□ -0.8
TRA2B-214ENST00000487615 HNF1AP20823 631 aa10.02□□□□□ -0.8
TRA2B-214ENST00000487615 ZNF90Q03938 601 aa10.02□□□□□ -0.8
TRA2B-214ENST00000487615 TNFRSF9Q07011 255 aa10.02□□□□□ -0.8
TRA2B-214ENST00000487615 ARSJQ5FYB0 599 aaPredicted RBP10.02□□□□□ -0.8
TRA2B-214ENST00000487615 MOB3BQ86TA1 216 aa10.02□□□□□ -0.8
TRA2B-214ENST00000487615 MDS2Q8NDY4 140 aa10.02□□□□□ -0.8
TRA2B-214ENST00000487615 RBKSQ9H477 322 aa10.02□□□□□ -0.8
TRA2B-214ENST00000487615 PATZ1Q9HBE1 687 aaKnown RBP10.02□□□□□ -0.8
TRA2B-214ENST00000487615 SSTR5P35346 364 aa10.02□□□□□ -0.81
TRA2B-214ENST00000487615 WNT5AP41221 380 aa10.02□□□□□ -0.81
TRA2B-214ENST00000487615 RPL31P62899 125 aaKnown RBP10.02□□□□□ -0.81
TRA2B-214ENST00000487615 RNF212Q495C1 297 aa10.02□□□□□ -0.81
TRA2B-214ENST00000487615 ACP7Q6ZNF0 438 aa10.02□□□□□ -0.81
TRA2B-214ENST00000487615 GCSAMQ8N6F7 178 aa10.02□□□□□ -0.81
TRA2B-214ENST00000487615 SMIM8Q96KF7 97 aa10.02□□□□□ -0.81
TRA2B-214ENST00000487615 C18orf12Q96KH6 178 aa10.02□□□□□ -0.81
TRA2B-214ENST00000487615 CCL13Q99616 98 aa10.02□□□□□ -0.81
TRA2B-214ENST00000487615 SH2D2AQ9NP31 389 aa10.02□□□□□ -0.81
TRA2B-214ENST00000487615 PRNDQ9UKY0 176 aa10.02□□□□□ -0.81
TRA2B-214ENST00000487615 B4DEV8 164 aa10.02□□□□□ -0.81
TRA2B-214ENST00000487615 CDX4O14627 284 aaPredicted RBP10.02□□□□□ -0.81
TRA2B-214ENST00000487615 COX7A2P2O60397 106 aa10.02□□□□□ -0.81
TRA2B-214ENST00000487615 BCL2P10415 239 aa10.02□□□□□ -0.81
TRA2B-214ENST00000487615 NPY1RP25929 384 aa10.02□□□□□ -0.81
TRA2B-214ENST00000487615 GLRXP35754 106 aa10.02□□□□□ -0.81
TRA2B-214ENST00000487615 SRSF4Q08170 494 aaKnown RBP10.02□□□□□ -0.81
TRA2B-214ENST00000487615 CYB561D1Q8N8Q1 229 aa10.02□□□□□ -0.81
TRA2B-214ENST00000487615 LRTM2Q8N967 370 aa10.02□□□□□ -0.81
TRA2B-214ENST00000487615 BORCS7Q96B45 105 aa10.02□□□□□ -0.81
TRA2B-214ENST00000487615 FAM210BQ96KR6 192 aa10.02□□□□□ -0.81
TRA2B-214ENST00000487615 OR4C12Q96R67 309 aa10.02□□□□□ -0.81
TRA2B-214ENST00000487615 NAT8Q9UHE5 227 aa10.02□□□□□ -0.81
TRA2B-214ENST00000487615 NBASA2RRP1 2371 aa10.02□□□□□ -0.81
TRA2B-214ENST00000487615 DBX1A6NMT0 343 aa10.01□□□□□ -0.81
TRA2B-214ENST00000487615 RAB5AP20339 215 aa10.01□□□□□ -0.81
TRA2B-214ENST00000487615 FABP9Q0Z7S8 132 aa10.01□□□□□ -0.81
TRA2B-214ENST00000487615 BSXQ3C1V8 233 aa10.01□□□□□ -0.81
TRA2B-214ENST00000487615 SLC35E3Q7Z769 313 aa10.01□□□□□ -0.81
TRA2B-214ENST00000487615 CMTM2Q8TAZ6 248 aa10.01□□□□□ -0.81
TRA2B-214ENST00000487615 TAF15Q92804 592 aaKnown RBP eCLIP10.01□□□□□ -0.813e-6■□□□□ 8.6
TRA2B-214ENST00000487615 RHOVQ96L33 236 aa10.01□□□□□ -0.81
TRA2B-214ENST00000487615 CALYQ9NYX4 217 aa10.01□□□□□ -0.81
TRA2B-214ENST00000487615 JPT1Q9UK76 154 aa10.01□□□□□ -0.81
TRA2B-214ENST00000487615 TRAV24A0A0B4J272 114 aa10.01□□□□□ -0.81
TRA2B-214ENST00000487615 PROB1E7EW31 1015 aa10.01□□□□□ -0.81
TRA2B-214ENST00000487615 S1PR2O95136 353 aa10.01□□□□□ -0.81
TRA2B-214ENST00000487615 UBE2G1P62253 170 aa10.01□□□□□ -0.81
TRA2B-214ENST00000487615 DIRC2Q96SL1 478 aa10.01□□□□□ -0.81
TRA2B-214ENST00000487615 ZDHHC8Q9ULC8 765 aa10.01□□□□□ -0.81
TRA2B-214ENST00000487615 ESPL1Q14674 2120 aa10.01□□□□□ -0.81
TRA2B-214ENST00000487615 IGHV2OR16-5A0A0B4J2B6 119 aa10.01□□□□□ -0.81
TRA2B-214ENST00000487615 MARCH11A6NNE9 402 aa10.01□□□□□ -0.81
TRA2B-214ENST00000487615 IL18BPO95998 194 aa10.01□□□□□ -0.81
TRA2B-214ENST00000487615 CEACAM1P13688 526 aa10.01□□□□□ -0.81
TRA2B-214ENST00000487615 PLPPR1Q8TBJ4 325 aa10.01□□□□□ -0.81
TRA2B-214ENST00000487615 CA5BP1Q8WTZ4 195 aa10.01□□□□□ -0.81
TRA2B-214ENST00000487615 HES4Q9HCC6 221 aa10.01□□□□□ -0.81
TRA2B-214ENST00000487615 SLC25A10Q9UBX3 287 aaPredicted RBP10.01□□□□□ -0.81
TRA2B-214ENST00000487615 SLC45A2Q9UMX9 530 aa10.01□□□□□ -0.81
TRA2B-214ENST00000487615 TIMM8BQ9Y5J9 83 aaPredicted RBP10.01□□□□□ -0.81
TRA2B-214ENST00000487615 TMEM131Q92545 1883 aa10.01□□□□□ -0.81
TRA2B-214ENST00000487615 PPIAL4EA0A075B759 164 aa10.01□□□□□ -0.81
TRA2B-214ENST00000487615 PPIAL4DF5H284 164 aa10.01□□□□□ -0.81
TRA2B-214ENST00000487615 H0YL77 283 aa10.01□□□□□ -0.81
TRA2B-214ENST00000487615 PPIAL4FP0DN26 164 aa10.01□□□□□ -0.81
TRA2B-214ENST00000487615 OPRK1P41145 380 aa10.01□□□□□ -0.81
TRA2B-214ENST00000487615 GAR1Q9NY12 217 aaKnown RBP10.01□□□□□ -0.81
TRA2B-214ENST00000487615 PPIAL4AQ9Y536 164 aa10.01□□□□□ -0.81
TRA2B-214ENST00000487615 MYO7BQ6PIF6 2116 aa10.01□□□□□ -0.81
TRA2B-214ENST00000487615 GYPAP02724 150 aa10□□□□□ -0.81
TRA2B-214ENST00000487615 HSPB1P04792 205 aaKnown RBP10□□□□□ -0.81
TRA2B-214ENST00000487615 SPP1P10451 314 aa10□□□□□ -0.81
TRA2B-214ENST00000487615 CD1BP29016 333 aa10□□□□□ -0.81
TRA2B-214ENST00000487615 S100A7P31151 101 aa10□□□□□ -0.81
TRA2B-214ENST00000487615 SPCS3P61009 180 aa10□□□□□ -0.81
TRA2B-214ENST00000487615 RPEQ96AT9 228 aa10□□□□□ -0.81
TRA2B-214ENST00000487615 LURAP1Q96LR2 239 aa10□□□□□ -0.81
TRA2B-214ENST00000487615 HARBI1Q96MB7 349 aa10□□□□□ -0.81
TRA2B-214ENST00000487615 ZNF251Q9BRH9 671 aa10□□□□□ -0.81
TRA2B-214ENST00000487615 SIRT7Q9NRC8 400 aa10□□□□□ -0.81
TRA2B-214ENST00000487615 ZNF320A2RRD8 509 aa10□□□□□ -0.81
TRA2B-214ENST00000487615 CEACAM18A8MTB9 384 aa10□□□□□ -0.81
TRA2B-214ENST00000487615 C11orf94C9JXX5 98 aa10□□□□□ -0.81
TRA2B-214ENST00000487615 FGF16O43320 207 aa10□□□□□ -0.81
TRA2B-214ENST00000487615 BAGE3Q86Y29 109 aa10□□□□□ -0.81
TRA2B-214ENST00000487615 BAGE2Q86Y30 109 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms