RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 RAB29O14966 203 aa11.58□□□□□ -0.56
MCF2L-228ENST00000487354 CD81P60033 236 aa11.58□□□□□ -0.56
MCF2L-228ENST00000487354 AWAT2Q6E213 333 aa11.58□□□□□ -0.56
MCF2L-228ENST00000487354 ZNF343Q6P1L6 599 aa11.58□□□□□ -0.56
MCF2L-228ENST00000487354 ZNF880Q6PDB4 577 aa11.58□□□□□ -0.56
MCF2L-228ENST00000487354 SVOPQ8N4V2 548 aa11.58□□□□□ -0.56
MCF2L-228ENST00000487354 JAGN1Q8N5M9 183 aa11.58□□□□□ -0.56
MCF2L-228ENST00000487354 DEFB125Q8N687 156 aa11.58□□□□□ -0.56
MCF2L-228ENST00000487354 GHSRQ92847 366 aa11.58□□□□□ -0.56
MCF2L-228ENST00000487354 RNF5Q99942 180 aa11.58□□□□□ -0.56
MCF2L-228ENST00000487354 FGF20Q9NP95 211 aaPredicted RBP11.58□□□□□ -0.56
MCF2L-228ENST00000487354 FAM53CQ9NYF3 392 aa11.58□□□□□ -0.56
MCF2L-228ENST00000487354 CRTAPO75718 401 aaPredicted RBP11.57□□□□□ -0.56
MCF2L-228ENST00000487354 SPDEFO95238 335 aa11.57□□□□□ -0.56
MCF2L-228ENST00000487354 GSTP1P09211 210 aaKnown RBP11.57□□□□□ -0.56
MCF2L-228ENST00000487354 MC5RP33032 325 aa11.57□□□□□ -0.56
MCF2L-228ENST00000487354 PJVKQ0ZLH3 352 aa11.57□□□□□ -0.56
MCF2L-228ENST00000487354 FXYD3Q14802 87 aa11.57□□□□□ -0.56
MCF2L-228ENST00000487354 SMN1Q16637 294 aaKnown RBP11.57□□□□□ -0.56
MCF2L-228ENST00000487354 MRGPRG-AS1Q2M3A8 158 aa11.57□□□□□ -0.56
MCF2L-228ENST00000487354 Q499Y3 187 aa11.57□□□□□ -0.56
MCF2L-228ENST00000487354 C1orf146Q5VVC0 180 aa11.57□□□□□ -0.56
MCF2L-228ENST00000487354 ZNF383Q8NA42 475 aa11.57□□□□□ -0.56
MCF2L-228ENST00000487354 DRAXINQ8NBI3 349 aaPredicted RBP11.57□□□□□ -0.56
MCF2L-228ENST00000487354 NEURL2Q9BR09 285 aa11.57□□□□□ -0.56
MCF2L-228ENST00000487354 TINAGL1Q9GZM7 467 aaPredicted RBP11.57□□□□□ -0.56
MCF2L-228ENST00000487354 H3BNX3 289 aa11.56□□□□□ -0.56
MCF2L-228ENST00000487354 H7C2Y5 167 aa11.56□□□□□ -0.56
MCF2L-228ENST00000487354 SLC22A1O15245 554 aa11.56□□□□□ -0.56
MCF2L-228ENST00000487354 WBP4O75554 376 aaKnown RBP11.56□□□□□ -0.56
MCF2L-228ENST00000487354 OR2A4O95047 310 aa11.56□□□□□ -0.56
MCF2L-228ENST00000487354 LY6G6CO95867 125 aa11.56□□□□□ -0.56
MCF2L-228ENST00000487354 NAPSAO96009 420 aa11.56□□□□□ -0.56
MCF2L-228ENST00000487354 IGLV2-23P01705 113 aa11.56□□□□□ -0.56
MCF2L-228ENST00000487354 CRYGBP07316 175 aa11.56□□□□□ -0.56
MCF2L-228ENST00000487354 EDN2P20800 178 aa11.56□□□□□ -0.56
MCF2L-228ENST00000487354 CD40LGP29965 261 aa11.56□□□□□ -0.56
MCF2L-228ENST00000487354 EWSR1Q01844 656 aaKnown RBP eCLIP11.56□□□□□ -0.56
MCF2L-228ENST00000487354 CD300EQ496F6 205 aaPredicted RBP11.56□□□□□ -0.56
MCF2L-228ENST00000487354 ZNF485Q8NCK3 441 aa11.56□□□□□ -0.56
MCF2L-228ENST00000487354 OR2K2Q8NGT1 345 aa11.56□□□□□ -0.56
MCF2L-228ENST00000487354 IL1F10Q8WWZ1 152 aa11.56□□□□□ -0.56
MCF2L-228ENST00000487354 FAM46BQ96A09 425 aa11.56□□□□□ -0.56
MCF2L-228ENST00000487354 ZNF355PQ9NSJ1 428 aa11.56□□□□□ -0.56
MCF2L-228ENST00000487354 PEF1Q9UBV8 284 aaKnown RBP11.56□□□□□ -0.56
MCF2L-228ENST00000487354 DNAH6Q9C0G6 4158 aa11.56□□□□□ -0.56
MCF2L-228ENST00000487354 A0A0G2JLM5 398 aa11.55□□□□□ -0.56
MCF2L-228ENST00000487354 A0A1W2PPK0 400 aa11.55□□□□□ -0.56
MCF2L-228ENST00000487354 ITGB1BP1O14713 200 aa11.55□□□□□ -0.56
MCF2L-228ENST00000487354 SLC25A17O43808 307 aa11.55□□□□□ -0.56
MCF2L-228ENST00000487354 LAX1Q8IWV1 398 aa11.55□□□□□ -0.56
MCF2L-228ENST00000487354 CDH26Q8IXH8 852 aa11.55□□□□□ -0.56
MCF2L-228ENST00000487354 RPP25LQ8N5L8 163 aaKnown RBP11.55□□□□□ -0.56
MCF2L-228ENST00000487354 ZFP41Q8N8Y5 198 aa11.55□□□□□ -0.56
MCF2L-228ENST00000487354 BVESQ8NE79 360 aa11.55□□□□□ -0.56
MCF2L-228ENST00000487354 PYDC1Q8WXC3 89 aa11.55□□□□□ -0.56
MCF2L-228ENST00000487354 SRD5A3Q9H8P0 318 aa11.55□□□□□ -0.56
MCF2L-228ENST00000487354 OR1A1Q9P1Q5 309 aa11.55□□□□□ -0.56
MCF2L-228ENST00000487354 STEAP1Q9UHE8 339 aa11.55□□□□□ -0.56
MCF2L-228ENST00000487354 RPL36Q9Y3U8 105 aaKnown RBP11.55□□□□□ -0.56
MCF2L-228ENST00000487354 ORC6Q9Y5N6 252 aa11.55□□□□□ -0.56
MCF2L-228ENST00000487354 BMPR1BO00238 502 aa11.54□□□□□ -0.56
MCF2L-228ENST00000487354 TPPPO94811 219 aa11.54□□□□□ -0.56
MCF2L-228ENST00000487354 YIF1BQ5BJH7 314 aa11.54□□□□□ -0.56
MCF2L-228ENST00000487354 C6orf201Q7Z4U5 140 aa11.54□□□□□ -0.56
MCF2L-228ENST00000487354 CBR4Q8N4T8 237 aa11.54□□□□□ -0.56
MCF2L-228ENST00000487354 Q96MT0 163 aa11.54□□□□□ -0.56
MCF2L-228ENST00000487354 TSNAXQ99598 290 aaKnown RBP11.54□□□□□ -0.56
MCF2L-228ENST00000487354 FAAP24Q9BTP7 215 aa11.54□□□□□ -0.56
MCF2L-228ENST00000487354 C11orf54Q9H0W9 315 aaPredicted RBP11.54□□□□□ -0.56
MCF2L-228ENST00000487354 ZC4H2Q9NQZ6 224 aa11.54□□□□□ -0.56
MCF2L-228ENST00000487354 BABAM2Q9NXR7 383 aa11.54□□□□□ -0.56
MCF2L-228ENST00000487354 CKLFQ9UBR5 152 aa11.54□□□□□ -0.56
MCF2L-228ENST00000487354 CLEC2DQ9UHP7 191 aa11.54□□□□□ -0.56
MCF2L-228ENST00000487354 LRRC42Q9Y546 428 aa11.54□□□□□ -0.56
MCF2L-228ENST00000487354 CPEP16870 476 aa11.53□□□□□ -0.56
MCF2L-228ENST00000487354 RPEL1Q2QD12 228 aa11.53□□□□□ -0.56
MCF2L-228ENST00000487354 OR10K2Q6IF99 312 aa11.53□□□□□ -0.56
MCF2L-228ENST00000487354 DERL3Q96Q80 235 aa11.53□□□□□ -0.56
MCF2L-228ENST00000487354 OVOL2Q9BRP0 275 aa11.53□□□□□ -0.56
MCF2L-228ENST00000487354 NICN1Q9BSH3 213 aa11.53□□□□□ -0.56
MCF2L-228ENST00000487354 KCNK15Q9H427 330 aa11.53□□□□□ -0.56
MCF2L-228ENST00000487354 ABRACLQ9P1F3 81 aa11.53□□□□□ -0.56
MCF2L-228ENST00000487354 OR11H12B2RN74 326 aa11.52□□□□□ -0.57
MCF2L-228ENST00000487354 AADACP22760 399 aa11.52□□□□□ -0.57
MCF2L-228ENST00000487354 RPS16P62249 146 aaKnown RBP11.52□□□□□ -0.57
MCF2L-228ENST00000487354 DEFB114Q30KQ6 69 aa11.52□□□□□ -0.57
MCF2L-228ENST00000487354 PDPNQ86YL7 162 aa11.52□□□□□ -0.57
MCF2L-228ENST00000487354 ADAD2Q8NCV1 583 aaKnown RBP11.52□□□□□ -0.57
MCF2L-228ENST00000487354 PTX4Q96A99 478 aa11.52□□□□□ -0.57
MCF2L-228ENST00000487354 ST6GALNAC5Q9BVH7 336 aa11.52□□□□□ -0.57
MCF2L-228ENST00000487354 DMRT1Q9Y5R6 373 aa11.52□□□□□ -0.57
MCF2L-228ENST00000487354 A0A0A6YYD4 124 aa11.51□□□□□ -0.57
MCF2L-228ENST00000487354 TRBV6-6A0A0A6YYG2 114 aa11.51□□□□□ -0.57
MCF2L-228ENST00000487354 CNIH1O95406 144 aa11.51□□□□□ -0.57
MCF2L-228ENST00000487354 APELAP0DMC3 54 aa11.51□□□□□ -0.57
MCF2L-228ENST00000487354 DCKP27707 260 aa11.51□□□□□ -0.57
MCF2L-228ENST00000487354 HTR2CP28335 458 aa11.51□□□□□ -0.57
MCF2L-228ENST00000487354 CAPGP40121 348 aa11.51□□□□□ -0.57
MCF2L-228ENST00000487354 RPS27AP62979 156 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms