RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 OR13C9Q8NGT0 318 aa3.87□□□□□ -1.79
R3HDM1-218ENST00000487294 OR10AC1Q8NH08 325 aa3.87□□□□□ -1.79
R3HDM1-218ENST00000487294 CT45A3Q8NHU0 189 aa3.87□□□□□ -1.79
R3HDM1-218ENST00000487294 TRUB1Q8WWH5 349 aaKnown RBP3.87□□□□□ -1.79
R3HDM1-218ENST00000487294 ARPC1AQ92747 370 aa3.87□□□□□ -1.79
R3HDM1-218ENST00000487294 ARL11Q969Q4 196 aa3.87□□□□□ -1.79
R3HDM1-218ENST00000487294 FLYWCH2Q96CP2 140 aaKnown RBP3.87□□□□□ -1.79
R3HDM1-218ENST00000487294 CCDC124Q96CT7 223 aaKnown RBP3.87□□□□□ -1.79
R3HDM1-218ENST00000487294 OR4C12Q96R67 309 aa3.87□□□□□ -1.79
R3HDM1-218ENST00000487294 TBX5Q99593 518 aa3.87□□□□□ -1.79
R3HDM1-218ENST00000487294 GABARAPL3Q9BY60 117 aa3.87□□□□□ -1.79
R3HDM1-218ENST00000487294 GABARAPL1Q9H0R8 117 aa3.87□□□□□ -1.79
R3HDM1-218ENST00000487294 CST11Q9H112 138 aa3.87□□□□□ -1.79
R3HDM1-218ENST00000487294 RAB9BQ9NP90 201 aa3.87□□□□□ -1.79
R3HDM1-218ENST00000487294 SIGLEC8Q9NYZ4 499 aa3.87□□□□□ -1.79
R3HDM1-218ENST00000487294 RCC2Q9P258 522 aaKnown RBP3.87□□□□□ -1.79
R3HDM1-218ENST00000487294 GNG8Q9UK08 70 aa3.87□□□□□ -1.79
R3HDM1-218ENST00000487294 STUB1Q9UNE7 303 aa3.87□□□□□ -1.79
R3HDM1-218ENST00000487294 FOXA2Q9Y261 457 aaPredicted RBP3.87□□□□□ -1.79
R3HDM1-218ENST00000487294 NUBP2Q9Y5Y2 271 aa3.87□□□□□ -1.79
R3HDM1-218ENST00000487294 IGHV4OR15-8A0A075B7B6 117 aa3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 A0A087WW49 117 aa3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 A0A0A0MQY5 61 aa3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 TMEM212A6NML5 194 aa3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 C12orf77C9JDV5 145 aa3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 G3V2T6 193 aa3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 M0R129 80 aa3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 GABRPO00591 440 aa3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 HSPB6O14558 160 aa3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 ZNF780AO75290 641 aaPredicted RBP3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 CA11O75493 328 aa3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 SC5DO75845 299 aa3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 GLAP06280 429 aa3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 RAB3AP20336 220 aa3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 BLVRBP30043 206 aaPredicted RBP3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 ATP6V1E1P36543 226 aa3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 RBM11P57052 281 aaKnown RBP3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 ACTBP60709 375 aa3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 PITPNAQ00169 270 aa3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 MMDQ15546 238 aa3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 MOGAT2Q3SYC2 334 aa3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 FAM53AQ6NSI3 398 aaPredicted RBP3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 FAM71F2Q6NXP2 309 aa3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 TRAT1Q6PIZ9 186 aa3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 IL34Q6ZMJ4 242 aa3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 ZNF833PQ6ZTB9 187 aa3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 ODF3L1Q8IXM7 274 aa3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 CADM3Q8N126 398 aa3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 SYS1Q8N2H4 156 aa3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 ACBD7Q8N6N7 88 aa3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 OR13C3Q8NGS6 347 aa3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 MRPS24Q96EL2 167 aaKnown RBP3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 PELI1Q96FA3 418 aa3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 MYCBPQ99417 103 aaPredicted RBP3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 NABP2Q9BQ15 211 aa3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 ANKRD60Q9BZ19 345 aa3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 RIBC2Q9H4K1 309 aa3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 SLA2Q9H6Q3 261 aa3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 SPACA1Q9HBV2 294 aa3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 PAK1IP1Q9NWT1 392 aaPredicted RBP3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 ST3GAL6Q9Y274 331 aa3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 ERGIC3Q9Y282 383 aa3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 EXOGQ9Y2C4 368 aaKnown RBP3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 WSB1Q9Y6I7 421 aa3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 FRAS1Q86XX4 4008 aa3.86□□□□□ -1.79
R3HDM1-218ENST00000487294 TRAV39A0A0B4J263 110 aa3.85□□□□□ -1.79
R3HDM1-218ENST00000487294 HMX3A6NHT5 357 aa3.85□□□□□ -1.79
R3HDM1-218ENST00000487294 H0Y980 276 aa3.85□□□□□ -1.79
R3HDM1-218ENST00000487294 H3BUA1 57 aa3.85□□□□□ -1.79
R3HDM1-218ENST00000487294 GEMIN2O14893 280 aaKnown RBP3.85□□□□□ -1.79
R3HDM1-218ENST00000487294 SLC31A2O15432 143 aa3.85□□□□□ -1.79
R3HDM1-218ENST00000487294 NBR2O15453 112 aa3.85□□□□□ -1.79
R3HDM1-218ENST00000487294 SPINT2O43291 252 aa3.85□□□□□ -1.79
R3HDM1-218ENST00000487294 ATP8B1O43520 1251 aa3.85□□□□□ -1.79
R3HDM1-218ENST00000487294 MITFO75030 526 aaPredicted RBP3.85□□□□□ -1.79
R3HDM1-218ENST00000487294 GPX5O75715 221 aa3.85□□□□□ -1.79
R3HDM1-218ENST00000487294 OR7C1O76099 320 aaPredicted RBP3.85□□□□□ -1.79
R3HDM1-218ENST00000487294 RGS11O94810 467 aa3.85□□□□□ -1.79
R3HDM1-218ENST00000487294 HTR1AP08908 422 aa3.85□□□□□ -1.79
R3HDM1-218ENST00000487294 SLC2A2P11168 524 aaPredicted RBP3.85□□□□□ -1.79
R3HDM1-218ENST00000487294 ZP3P21754 424 aa3.85□□□□□ -1.79
R3HDM1-218ENST00000487294 CNTFRP26992 372 aa3.85□□□□□ -1.79
R3HDM1-218ENST00000487294 SNRPGP62308 76 aaKnown RBP3.85□□□□□ -1.79
R3HDM1-218ENST00000487294 CX3CL1P78423 397 aa3.85□□□□□ -1.79
R3HDM1-218ENST00000487294 HTD2P86397 168 aa3.85□□□□□ -1.79
R3HDM1-218ENST00000487294 NDPQ00604 133 aa3.85□□□□□ -1.79
R3HDM1-218ENST00000487294 TMEM267Q0VDI3 215 aaPredicted RBP3.85□□□□□ -1.79
R3HDM1-218ENST00000487294 KLF5Q13887 457 aaPredicted RBP3.85□□□□□ -1.79
R3HDM1-218ENST00000487294 FLOT2Q14254 428 aa3.85□□□□□ -1.79
R3HDM1-218ENST00000487294 RSU1Q15404 277 aa3.85□□□□□ -1.79
R3HDM1-218ENST00000487294 ATP6AP1Q15904 470 aa3.85□□□□□ -1.79
R3HDM1-218ENST00000487294 ZSCAN26Q16670 478 aa3.85□□□□□ -1.79
R3HDM1-218ENST00000487294 LTC4SQ16873 150 aa3.85□□□□□ -1.79
R3HDM1-218ENST00000487294 PIGYQ3MUY2 71 aa3.85□□□□□ -1.79
R3HDM1-218ENST00000487294 MORN2Q502X0 79 aa3.85□□□□□ -1.79
R3HDM1-218ENST00000487294 C6orf183Q5T699 404 aa3.85□□□□□ -1.79
R3HDM1-218ENST00000487294 MEDAGQ5VYS4 303 aa3.85□□□□□ -1.79
R3HDM1-218ENST00000487294 ZNF367Q7RTV3 350 aa3.85□□□□□ -1.79
R3HDM1-218ENST00000487294 LAX1Q8IWV1 398 aa3.85□□□□□ -1.79
R3HDM1-218ENST00000487294 OR51A2Q8NGJ7 313 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms