RNA–Protein interactions for RNA: ENST00000487284.2

CUX1-209, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-209ENST00000487284 PSG11Q9UQ72 335 aa11.69□□□□□ -0.54
CUX1-209ENST00000487284 A0A0D9SG52 128 aa11.68□□□□□ -0.54
CUX1-209ENST00000487284 ST8SIA5O15466 376 aa11.68□□□□□ -0.54
CUX1-209ENST00000487284 VDAC1P21796 283 aa11.68□□□□□ -0.54
CUX1-209ENST00000487284 GPR6P46095 362 aaPredicted RBP11.68□□□□□ -0.54
CUX1-209ENST00000487284 PDLIM4P50479 330 aa11.68□□□□□ -0.54
CUX1-209ENST00000487284 LTC4SQ16873 150 aa11.68□□□□□ -0.54
CUX1-209ENST00000487284 DEFB113Q30KQ7 82 aa11.68□□□□□ -0.54
CUX1-209ENST00000487284 NMSQ5H8A3 153 aa11.68□□□□□ -0.54
CUX1-209ENST00000487284 ZNF767PQ75MW2 155 aa11.68□□□□□ -0.54
CUX1-209ENST00000487284 SPIN2AQ99865 258 aa11.68□□□□□ -0.54
CUX1-209ENST00000487284 SPIN2BQ9BPZ2 258 aa11.68□□□□□ -0.54
CUX1-209ENST00000487284 ARL6Q9H0F7 186 aa11.68□□□□□ -0.54
CUX1-209ENST00000487284 C19orf12Q9NSK7 152 aa11.68□□□□□ -0.54
CUX1-209ENST00000487284 IDI2-AS1Q9NZ38 188 aa11.68□□□□□ -0.54
CUX1-209ENST00000487284 OR5AC2Q9NZP5 309 aa11.68□□□□□ -0.54
CUX1-209ENST00000487284 DVL1O14640 695 aa11.67□□□□□ -0.54
CUX1-209ENST00000487284 SERPINE2P07093 398 aa11.67□□□□□ -0.54
CUX1-209ENST00000487284 OMGP23515 440 aa11.67□□□□□ -0.54
CUX1-209ENST00000487284 S100A10P60903 97 aa11.67□□□□□ -0.54
CUX1-209ENST00000487284 RPL31P62899 125 aaKnown RBP11.67□□□□□ -0.54
CUX1-209ENST00000487284 CATR1Q13166 79 aa11.67□□□□□ -0.54
CUX1-209ENST00000487284 ZNF585BQ52M93 769 aa11.67□□□□□ -0.54
CUX1-209ENST00000487284 TEX261Q6UWH6 196 aa11.67□□□□□ -0.54
CUX1-209ENST00000487284 ZNF66Q6ZN08 573 aa11.67□□□□□ -0.54
CUX1-209ENST00000487284 TCTEX1D1Q8N7M0 179 aa11.67□□□□□ -0.54
CUX1-209ENST00000487284 OR10A7Q8NGE5 316 aa11.67□□□□□ -0.54
CUX1-209ENST00000487284 OR4D5Q8NGN0 318 aa11.67□□□□□ -0.54
CUX1-209ENST00000487284 OR1S1Q8NH92 325 aa11.67□□□□□ -0.54
CUX1-209ENST00000487284 DCUN1D4Q92564 292 aa11.67□□□□□ -0.54
CUX1-209ENST00000487284 ABHD14BQ96IU4 210 aa11.67□□□□□ -0.54
CUX1-209ENST00000487284 IFI27L2Q9H2X8 130 aa11.67□□□□□ -0.54
CUX1-209ENST00000487284 GAL3ST2Q9H3Q3 398 aa11.67□□□□□ -0.54
CUX1-209ENST00000487284 NARFLQ9H6Q4 476 aa11.67□□□□□ -0.54
CUX1-209ENST00000487284 FAM212BQ9NTI7 297 aaPredicted RBP11.67□□□□□ -0.54
CUX1-209ENST00000487284 BEX4Q9NWD9 120 aaPredicted RBP11.67□□□□□ -0.54
CUX1-209ENST00000487284 SDHAF2Q9NX18 166 aa11.67□□□□□ -0.54
CUX1-209ENST00000487284 U3KQ87 197 aa11.67□□□□□ -0.54
CUX1-209ENST00000487284 FLNBO75369 2602 aaKnown RBP11.67□□□□□ -0.54
CUX1-209ENST00000487284 IGKV1-39P01597 117 aa11.67□□□□□ -0.54
CUX1-209ENST00000487284 IGKV1D-39P04432 117 aa11.67□□□□□ -0.54
CUX1-209ENST00000487284 ZNF273Q14593 569 aa11.67□□□□□ -0.54
CUX1-209ENST00000487284 CLEC2AQ6UVW9 174 aa11.67□□□□□ -0.54
CUX1-209ENST00000487284 INO80EQ8NBZ0 244 aaPredicted RBP11.67□□□□□ -0.54
CUX1-209ENST00000487284 ZNF439Q8NDP4 499 aa11.67□□□□□ -0.54
CUX1-209ENST00000487284 FAM168AQ92567 244 aa11.67□□□□□ -0.54
CUX1-209ENST00000487284 RRNAD1Q96FB5 475 aaKnown RBP11.67□□□□□ -0.54
CUX1-209ENST00000487284 HSD17B10Q99714 261 aaKnown RBP11.67□□□□□ -0.54
CUX1-209ENST00000487284 BPESC1Q9GZL8 116 aa11.67□□□□□ -0.54
CUX1-209ENST00000487284 ZFP57Q9NU63 452 aa11.67□□□□□ -0.54
CUX1-209ENST00000487284 RPUSD1Q9UJJ7 312 aaKnown RBP11.67□□□□□ -0.54
CUX1-209ENST00000487284 CCDC168Q8NDH2 2452 aa11.66□□□□□ -0.54
CUX1-209ENST00000487284 SETXQ7Z333 2677 aaKnown RBP11.66□□□□□ -0.54
CUX1-209ENST00000487284 K7EPK0 472 aa11.66□□□□□ -0.54
CUX1-209ENST00000487284 DEDDO75618 318 aa11.66□□□□□ -0.54
CUX1-209ENST00000487284 MBPP02686 304 aaPredicted RBP11.66□□□□□ -0.54
CUX1-209ENST00000487284 SLC25A6P12236 298 aa11.66□□□□□ -0.54
CUX1-209ENST00000487284 ZNF16P17020 682 aaPredicted RBP11.66□□□□□ -0.54
CUX1-209ENST00000487284 GPR12P47775 334 aa11.66□□□□□ -0.54
CUX1-209ENST00000487284 RAB7AP51149 207 aa11.66□□□□□ -0.54
CUX1-209ENST00000487284 RPL30P62888 115 aaKnown RBP11.66□□□□□ -0.54
CUX1-209ENST00000487284 Q3ZCU0 254 aa11.66□□□□□ -0.54
CUX1-209ENST00000487284 TMEM155Q4W5P6 130 aa11.66□□□□□ -0.54
CUX1-209ENST00000487284 TMEM200BQ69YZ2 307 aa11.66□□□□□ -0.54
CUX1-209ENST00000487284 FAM219AQ8IW50 185 aa11.66□□□□□ -0.54
CUX1-209ENST00000487284 FAM71E2Q8N5Q1 922 aa11.66□□□□□ -0.54
CUX1-209ENST00000487284 ZNF680Q8NEM1 530 aa11.66□□□□□ -0.54
CUX1-209ENST00000487284 OR8H1Q8NGG4 311 aa11.66□□□□□ -0.54
CUX1-209ENST00000487284 C10orf105Q8TEF2 133 aa11.66□□□□□ -0.54
CUX1-209ENST00000487284 LSM10Q969L4 123 aaKnown RBP11.66□□□□□ -0.54
CUX1-209ENST00000487284 AQP10Q96PS8 301 aa11.66□□□□□ -0.54
CUX1-209ENST00000487284 GAB2Q9UQC2 676 aa11.66□□□□□ -0.54
CUX1-209ENST00000487284 PROP1O75360 226 aa11.65□□□□□ -0.54
CUX1-209ENST00000487284 ZNF134P52741 427 aa11.65□□□□□ -0.54
CUX1-209ENST00000487284 AP2S1P53680 142 aaPredicted RBP11.65□□□□□ -0.54
CUX1-209ENST00000487284 SMCO1Q147U7 214 aa11.65□□□□□ -0.54
CUX1-209ENST00000487284 UTF1Q5T230 341 aa11.65□□□□□ -0.54
CUX1-209ENST00000487284 PRAMEF5Q5TYX0 476 aa11.65□□□□□ -0.54
CUX1-209ENST00000487284 LRRC75A-AS1Q8N1F1 130 aa11.65□□□□□ -0.54
CUX1-209ENST00000487284 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.65□□□□□ -0.54
CUX1-209ENST00000487284 MBD6Q96DN6 1003 aa11.65□□□□□ -0.54
CUX1-209ENST00000487284 ZNF714Q96N38 554 aa11.65□□□□□ -0.54
CUX1-209ENST00000487284 PIMREGQ9BSJ6 248 aa11.65□□□□□ -0.54
CUX1-209ENST00000487284 ABHD14AQ9BUJ0 271 aa11.65□□□□□ -0.54
CUX1-209ENST00000487284 IGHV4-30-2A0A087WSY4 118 aa11.64□□□□□ -0.55
CUX1-209ENST00000487284 TRBV23-1A0A0A0MS06 115 aa11.64□□□□□ -0.55
CUX1-209ENST00000487284 A0A0G2JRQ6 117 aa11.64□□□□□ -0.55
CUX1-209ENST00000487284 NDUFS8O00217 210 aa11.64□□□□□ -0.55
CUX1-209ENST00000487284 SLC31A2O15432 143 aa11.64□□□□□ -0.55
CUX1-209ENST00000487284 ST8SIA3O43173 380 aa11.64□□□□□ -0.55
CUX1-209ENST00000487284 BCL2L11O43521 198 aa11.64□□□□□ -0.55
CUX1-209ENST00000487284 MMP23AO75900 390 aa11.64□□□□□ -0.55
CUX1-209ENST00000487284 SCGB1D2O95969 90 aa11.64□□□□□ -0.55
CUX1-209ENST00000487284 IGKV1-5P01602 117 aa11.64□□□□□ -0.55
CUX1-209ENST00000487284 RLN2P04090 185 aa11.64□□□□□ -0.55
CUX1-209ENST00000487284 CLEC12BQ2HXU8 276 aa11.64□□□□□ -0.55
CUX1-209ENST00000487284 CT45A1Q5HYN5 189 aa11.64□□□□□ -0.55
CUX1-209ENST00000487284 THOC7Q6I9Y2 204 aaKnown RBP11.64□□□□□ -0.55
CUX1-209ENST00000487284 BTNL3Q6UXE8 466 aa11.64□□□□□ -0.55
CUX1-209ENST00000487284 HEPN1Q6WQI6 88 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms