RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 B4E171 279 aa10.27□□□□□ -0.76
COL3A1-206ENST00000487010 PAGE4O60829 102 aa10.27□□□□□ -0.76
COL3A1-206ENST00000487010 RAMP3O60896 148 aa10.27□□□□□ -0.76
COL3A1-206ENST00000487010 VENTXO95231 258 aa10.27□□□□□ -0.76
COL3A1-206ENST00000487010 SERPINA7P05543 415 aa10.27□□□□□ -0.76
COL3A1-206ENST00000487010 P0C879 139 aa10.27□□□□□ -0.76
COL3A1-206ENST00000487010 COX5AP20674 150 aa10.27□□□□□ -0.76
COL3A1-206ENST00000487010 TSPAN7P41732 249 aa10.27□□□□□ -0.76
COL3A1-206ENST00000487010 SSX2Q16385 188 aa10.27□□□□□ -0.76
COL3A1-206ENST00000487010 TMEM18Q96B42 140 aa10.27□□□□□ -0.76
COL3A1-206ENST00000487010 CLN8Q9UBY8 286 aa10.27□□□□□ -0.76
COL3A1-206ENST00000487010 ARHGAP21Q5T5U3 1957 aa10.27□□□□□ -0.77
COL3A1-206ENST00000487010 LRRC30A6NM36 301 aa10.27□□□□□ -0.77
COL3A1-206ENST00000487010 KRASP01116 189 aa10.27□□□□□ -0.77
COL3A1-206ENST00000487010 SNRPCP09234 159 aaKnown RBP10.27□□□□□ -0.77
COL3A1-206ENST00000487010 G6PCP35575 357 aa10.27□□□□□ -0.77
COL3A1-206ENST00000487010 ERVK11-1P61568 191 aa10.27□□□□□ -0.77
COL3A1-206ENST00000487010 TFF3Q07654 80 aa10.27□□□□□ -0.77
COL3A1-206ENST00000487010 WDR86Q86TI4 376 aa10.27□□□□□ -0.77
COL3A1-206ENST00000487010 ZNF645Q8N7E2 425 aa10.27□□□□□ -0.77
COL3A1-206ENST00000487010 ZBTB34Q8NCN2 500 aa10.27□□□□□ -0.77
COL3A1-206ENST00000487010 OR2M7Q8NG81 312 aa10.27□□□□□ -0.77
COL3A1-206ENST00000487010 OR10P1Q8NGE3 313 aa10.27□□□□□ -0.77
COL3A1-206ENST00000487010 FAM173AQ9BQD7 235 aa10.27□□□□□ -0.77
COL3A1-206ENST00000487010 RTL8AQ9BWD3 113 aa10.27□□□□□ -0.77
COL3A1-206ENST00000487010 MRPL37Q9BZE1 423 aaKnown RBP10.27□□□□□ -0.77
COL3A1-206ENST00000487010 ZNF703Q9H7S9 590 aaPredicted RBP10.27□□□□□ -0.77
COL3A1-206ENST00000487010 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.27□□□□□ -0.77
COL3A1-206ENST00000487010 KMT2EQ8IZD2 1858 aa10.26□□□□□ -0.77
COL3A1-206ENST00000487010 ODAMA1E959 279 aa10.26□□□□□ -0.77
COL3A1-206ENST00000487010 NPPCP23582 126 aa10.26□□□□□ -0.77
COL3A1-206ENST00000487010 CCKARP32238 428 aa10.26□□□□□ -0.77
COL3A1-206ENST00000487010 SSPNQ14714 243 aa10.26□□□□□ -0.77
COL3A1-206ENST00000487010 SLC10A1Q14973 349 aa10.26□□□□□ -0.77
COL3A1-206ENST00000487010 USF2Q15853 346 aaPredicted RBP10.26□□□□□ -0.77
COL3A1-206ENST00000487010 Q8IYB0 196 aa10.26□□□□□ -0.77
COL3A1-206ENST00000487010 SCCPDHQ8NBX0 429 aa10.26□□□□□ -0.77
COL3A1-206ENST00000487010 DDA1Q9BW61 102 aa10.26□□□□□ -0.77
COL3A1-206ENST00000487010 NPCDR1Q9BY65 106 aa10.26□□□□□ -0.77
COL3A1-206ENST00000487010 MT-CO3P00414 261 aa10.26□□□□□ -0.77
COL3A1-206ENST00000487010 DUSP3P51452 185 aaPredicted RBP10.26□□□□□ -0.77
COL3A1-206ENST00000487010 GNB2P62879 340 aa10.26□□□□□ -0.77
COL3A1-206ENST00000487010 RPL30P62888 115 aaKnown RBP10.26□□□□□ -0.77
COL3A1-206ENST00000487010 PMP22Q01453 160 aa10.26□□□□□ -0.77
COL3A1-206ENST00000487010 ZNF816Q0VGE8 651 aaPredicted RBP10.26□□□□□ -0.77
COL3A1-206ENST00000487010 PRSS8Q16651 343 aa10.26□□□□□ -0.77
COL3A1-206ENST00000487010 VWC2Q2TAL6 325 aa10.26□□□□□ -0.77
COL3A1-206ENST00000487010 SPATA46Q5T0L3 261 aa10.26□□□□□ -0.77
COL3A1-206ENST00000487010 KCNIP4Q6PIL6 250 aa10.26□□□□□ -0.77
COL3A1-206ENST00000487010 NUFIP2Q7Z417 695 aaKnown RBP10.26□□□□□ -0.77
COL3A1-206ENST00000487010 ZNF709Q8N972 641 aa10.26□□□□□ -0.77
COL3A1-206ENST00000487010 DTD1Q8TEA8 209 aa10.26□□□□□ -0.77
COL3A1-206ENST00000487010 C5orf30Q96GV9 206 aa10.26□□□□□ -0.77
COL3A1-206ENST00000487010 LURAP1Q96LR2 239 aa10.26□□□□□ -0.77
COL3A1-206ENST00000487010 POLDIP2Q9Y2S7 368 aa10.26□□□□□ -0.77
COL3A1-206ENST00000487010 DOCK10Q96BY6 2186 aa10.25□□□□□ -0.77
COL3A1-206ENST00000487010 MED12LQ86YW9 2145 aa10.25□□□□□ -0.77
COL3A1-206ENST00000487010 C1QTNF9BB2RNN3 333 aa10.25□□□□□ -0.77
COL3A1-206ENST00000487010 SH2D1BO14796 132 aa10.25□□□□□ -0.77
COL3A1-206ENST00000487010 MLNRO43193 412 aa10.25□□□□□ -0.77
COL3A1-206ENST00000487010 ZG16O60844 167 aa10.25□□□□□ -0.77
COL3A1-206ENST00000487010 SPCS3P61009 180 aa10.25□□□□□ -0.77
COL3A1-206ENST00000487010 LCN2P80188 198 aa10.25□□□□□ -0.77
COL3A1-206ENST00000487010 EIF4EBP1Q13541 118 aaPredicted RBP10.25□□□□□ -0.77
COL3A1-206ENST00000487010 ZNF146Q15072 292 aa10.25□□□□□ -0.77
COL3A1-206ENST00000487010 GBGT1Q8N5D6 347 aa10.25□□□□□ -0.77
COL3A1-206ENST00000487010 OR1L1Q8NH94 360 aa10.25□□□□□ -0.77
COL3A1-206ENST00000487010 CT55Q8WUE5 264 aa10.25□□□□□ -0.77
COL3A1-206ENST00000487010 OR2D2Q9H210 308 aa10.25□□□□□ -0.77
COL3A1-206ENST00000487010 GP6Q9HCN6 339 aa10.25□□□□□ -0.77
COL3A1-206ENST00000487010 B4GALT7Q9UBV7 327 aa10.25□□□□□ -0.77
COL3A1-206ENST00000487010 R4GN57 208 aa10.25□□□□□ -0.77
COL3A1-206ENST00000487010 C11orf94C9JXX5 98 aa10.24□□□□□ -0.77
COL3A1-206ENST00000487010 NEURL1O76050 574 aa10.24□□□□□ -0.77
COL3A1-206ENST00000487010 S1PR2O95136 353 aa10.24□□□□□ -0.77
COL3A1-206ENST00000487010 NXPH2O95156 264 aa10.24□□□□□ -0.77
COL3A1-206ENST00000487010 CHRNA7P36544 502 aa10.24□□□□□ -0.77
COL3A1-206ENST00000487010 CNN1P51911 297 aaKnown RBP10.24□□□□□ -0.77
COL3A1-206ENST00000487010 RPS16P62249 146 aaKnown RBP10.24□□□□□ -0.77
COL3A1-206ENST00000487010 IQCJQ1A5X6 159 aa10.24□□□□□ -0.77
COL3A1-206ENST00000487010 TGIF2LXQ8IUE1 241 aa10.24□□□□□ -0.77
COL3A1-206ENST00000487010 MRPL41Q8IXM3 137 aaKnown RBP10.24□□□□□ -0.77
COL3A1-206ENST00000487010 ZDHHC16Q969W1 377 aa10.24□□□□□ -0.77
COL3A1-206ENST00000487010 THOC3Q96J01 351 aaKnown RBP10.24□□□□□ -0.77
COL3A1-206ENST00000487010 CIB3Q96Q77 187 aaPredicted RBP10.24□□□□□ -0.77
COL3A1-206ENST00000487010 KCNIP1Q9NZI2 227 aa10.24□□□□□ -0.77
COL3A1-206ENST00000487010 FAM166BA8MTA8 275 aa10.24□□□□□ -0.77
COL3A1-206ENST00000487010 PATE3B3GLJ2 98 aa10.24□□□□□ -0.77
COL3A1-206ENST00000487010 C17orf112F2Z3M2 114 aa10.24□□□□□ -0.77
COL3A1-206ENST00000487010 GALR2O43603 387 aaPredicted RBP10.24□□□□□ -0.77
COL3A1-206ENST00000487010 OR4A8P0C604 315 aa10.24□□□□□ -0.77
COL3A1-206ENST00000487010 CD99P14209 185 aa10.24□□□□□ -0.77
COL3A1-206ENST00000487010 RAC2P15153 192 aa10.24□□□□□ -0.77
COL3A1-206ENST00000487010 IL3RAP26951 378 aa10.24□□□□□ -0.77
COL3A1-206ENST00000487010 MAGEA5P43359 124 aa10.24□□□□□ -0.77
COL3A1-206ENST00000487010 CDC34P49427 236 aaPredicted RBP10.24□□□□□ -0.77
COL3A1-206ENST00000487010 BRWD1-AS2P59051 145 aa10.24□□□□□ -0.77
COL3A1-206ENST00000487010 PAX5Q02548 391 aa10.24□□□□□ -0.77
COL3A1-206ENST00000487010 DCAF12Q5T6F0 453 aa10.24□□□□□ -0.77
COL3A1-206ENST00000487010 FAM78BQ5VT40 261 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms