RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 MIDNQ504T8 468 aa10.33□□□□□ -0.76
HDAC6-229ENST00000486665 TPTE2P1Q5T6R2 138 aa10.33□□□□□ -0.76
HDAC6-229ENST00000486665 MARCH1Q8TCQ1 289 aa10.33□□□□□ -0.76
HDAC6-229ENST00000486665 PRRT1Q99946 306 aa10.33□□□□□ -0.76
HDAC6-229ENST00000486665 SDHAF2Q9NX18 166 aa10.33□□□□□ -0.76
HDAC6-229ENST00000486665 DPM3Q9P2X0 92 aa10.33□□□□□ -0.76
HDAC6-229ENST00000486665 SCP2D1Q9UJQ7 156 aa10.33□□□□□ -0.76
HDAC6-229ENST00000486665 ZNF221Q9UK13 617 aa10.33□□□□□ -0.76
HDAC6-229ENST00000486665 GAB2Q9UQC2 676 aa10.33□□□□□ -0.76
HDAC6-229ENST00000486665 LEUTXA8MZ59 168 aa10.32□□□□□ -0.76
HDAC6-229ENST00000486665 HAX1O00165 279 aa10.32□□□□□ -0.76
HDAC6-229ENST00000486665 RAB29O14966 203 aa10.32□□□□□ -0.76
HDAC6-229ENST00000486665 PI3P19957 117 aa10.32□□□□□ -0.76
HDAC6-229ENST00000486665 EPHA1P21709 976 aa10.32□□□□□ -0.76
HDAC6-229ENST00000486665 REG1BP48304 166 aa10.32□□□□□ -0.76
HDAC6-229ENST00000486665 ZNF137PP52743 207 aa10.32□□□□□ -0.76
HDAC6-229ENST00000486665 UCP3P55916 312 aa10.32□□□□□ -0.76
HDAC6-229ENST00000486665 BAMBIQ13145 260 aa10.32□□□□□ -0.76
HDAC6-229ENST00000486665 DCTN2Q13561 401 aaKnown RBP10.32□□□□□ -0.76
HDAC6-229ENST00000486665 MINOS1Q5TGZ0 78 aa10.32□□□□□ -0.76
HDAC6-229ENST00000486665 ZNF818PQ6ZRF7 136 aa10.32□□□□□ -0.76
HDAC6-229ENST00000486665 ZNF833PQ6ZTB9 187 aa10.32□□□□□ -0.76
HDAC6-229ENST00000486665 DRAM1Q8N682 238 aa10.32□□□□□ -0.76
HDAC6-229ENST00000486665 ZNF645Q8N7E2 425 aa10.32□□□□□ -0.76
HDAC6-229ENST00000486665 POC5Q8NA72 575 aa10.32□□□□□ -0.76
HDAC6-229ENST00000486665 C22orf15Q8WYQ4 148 aa10.32□□□□□ -0.76
HDAC6-229ENST00000486665 RBMXL1Q96E39 390 aaKnown RBP10.32□□□□□ -0.76
HDAC6-229ENST00000486665 GPHA2Q96T91 129 aa10.32□□□□□ -0.76
HDAC6-229ENST00000486665 RSRP1Q9BUV0 290 aa10.32□□□□□ -0.76
HDAC6-229ENST00000486665 PIPOXQ9P0Z9 390 aa10.32□□□□□ -0.76
HDAC6-229ENST00000486665 VSIG4Q9Y279 399 aa10.32□□□□□ -0.76
HDAC6-229ENST00000486665 TBL2Q9Y4P3 447 aaKnown RBP10.32□□□□□ -0.76
HDAC6-229ENST00000486665 AMMECR1Q9Y4X0 333 aaPredicted RBP10.32□□□□□ -0.76
HDAC6-229ENST00000486665 HILPDAQ9Y5L2 63 aa10.32□□□□□ -0.76
HDAC6-229ENST00000486665 MINOS1-NBL1R4GNA1 71 aa10.32□□□□□ -0.76
HDAC6-229ENST00000486665 PGAM2P15259 253 aa10.31□□□□□ -0.76
HDAC6-229ENST00000486665 IL3RAP26951 378 aa10.31□□□□□ -0.76
HDAC6-229ENST00000486665 SRP14P37108 136 aaKnown RBP10.31□□□□□ -0.76
HDAC6-229ENST00000486665 BPIFB3P59826 476 aa10.31□□□□□ -0.76
HDAC6-229ENST00000486665 EIF4EBP1Q13541 118 aaPredicted RBP10.31□□□□□ -0.76
HDAC6-229ENST00000486665 SSX2Q16385 188 aa10.31□□□□□ -0.76
HDAC6-229ENST00000486665 PLA1AQ53H76 456 aa10.31□□□□□ -0.76
HDAC6-229ENST00000486665 MZT2BQ6NZ67 158 aa10.31□□□□□ -0.76
HDAC6-229ENST00000486665 DRAXINQ8NBI3 349 aaPredicted RBP10.31□□□□□ -0.76
HDAC6-229ENST00000486665 FAM216AQ8WUB2 273 aa10.31□□□□□ -0.76
HDAC6-229ENST00000486665 MALSU1Q96EH3 234 aa10.31□□□□□ -0.76
HDAC6-229ENST00000486665 RTBDNQ9BSG5 229 aaPredicted RBP10.31□□□□□ -0.76
HDAC6-229ENST00000486665 MS4A7Q9GZW8 240 aaPredicted RBP10.31□□□□□ -0.76
HDAC6-229ENST00000486665 GHITMQ9H3K2 345 aa10.31□□□□□ -0.76
HDAC6-229ENST00000486665 GPR132Q9UNW8 380 aa10.31□□□□□ -0.76
HDAC6-229ENST00000486665 MDFIC2A0A1B0GVS7 189 aa10.3□□□□□ -0.76
HDAC6-229ENST00000486665 M0R1X1 148 aa10.3□□□□□ -0.76
HDAC6-229ENST00000486665 TNFSF12O43508 249 aa10.3□□□□□ -0.76
HDAC6-229ENST00000486665 GAPDHP04406 335 aaKnown RBP10.3□□□□□ -0.76
HDAC6-229ENST00000486665 CT45A6P0DMU7 189 aa10.3□□□□□ -0.76
HDAC6-229ENST00000486665 CT45A5P0DMU8 189 aa10.3□□□□□ -0.76
HDAC6-229ENST00000486665 CT45A7P0DMV0 189 aa10.3□□□□□ -0.76
HDAC6-229ENST00000486665 SPNP16150 400 aa10.3□□□□□ -0.76
HDAC6-229ENST00000486665 SLC6A1P30531 599 aa10.3□□□□□ -0.76
HDAC6-229ENST00000486665 RPL30P62888 115 aaKnown RBP10.3□□□□□ -0.76
HDAC6-229ENST00000486665 DEFB112Q30KQ8 113 aa10.3□□□□□ -0.76
HDAC6-229ENST00000486665 PHLDA2Q53GA4 152 aa10.3□□□□□ -0.76
HDAC6-229ENST00000486665 LPCAT3Q6P1A2 487 aa10.3□□□□□ -0.76
HDAC6-229ENST00000486665 C9orf139Q6ZV77 190 aa10.3□□□□□ -0.76
HDAC6-229ENST00000486665 SLC38A6Q8IZM9 456 aa10.3□□□□□ -0.76
HDAC6-229ENST00000486665 TEX29Q8N6K0 151 aa10.3□□□□□ -0.76
HDAC6-229ENST00000486665 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.3□□□□□ -0.76
HDAC6-229ENST00000486665 RTN4IP1Q8WWV3 396 aaPredicted RBP10.3□□□□□ -0.76
HDAC6-229ENST00000486665 RPEQ96AT9 228 aa10.3□□□□□ -0.76
HDAC6-229ENST00000486665 S1PR3Q99500 378 aa10.3□□□□□ -0.76
HDAC6-229ENST00000486665 MRPL20Q9BYC9 149 aaKnown RBP10.3□□□□□ -0.76
HDAC6-229ENST00000486665 C5orf66Q9H5L9 145 aa10.3□□□□□ -0.76
HDAC6-229ENST00000486665 OCEL1Q9H607 264 aa10.3□□□□□ -0.76
HDAC6-229ENST00000486665 PALMDQ9NP74 551 aa10.3□□□□□ -0.76
HDAC6-229ENST00000486665 FLVCR2Q9UPI3 526 aa10.3□□□□□ -0.76
HDAC6-229ENST00000486665 MEGF8Q7Z7M0 2845 aa10.29□□□□□ -0.76
HDAC6-229ENST00000486665 FAM240BA0A1B0GVZ2 78 aa10.29□□□□□ -0.76
HDAC6-229ENST00000486665 A0A1W2PPI3 338 aa10.29□□□□□ -0.76
HDAC6-229ENST00000486665 GPR31O00270 319 aa10.29□□□□□ -0.76
HDAC6-229ENST00000486665 PGLYRP1O75594 196 aaPredicted RBP10.29□□□□□ -0.76
HDAC6-229ENST00000486665 SLC22A5O76082 557 aa10.29□□□□□ -0.76
HDAC6-229ENST00000486665 NDUFB6O95139 128 aa10.29□□□□□ -0.76
HDAC6-229ENST00000486665 CTSDP07339 412 aaPredicted RBP10.29□□□□□ -0.76
HDAC6-229ENST00000486665 HNF1AP20823 631 aa10.29□□□□□ -0.76
HDAC6-229ENST00000486665 CEACAM3P40198 252 aa10.29□□□□□ -0.76
HDAC6-229ENST00000486665 DEFA1P59665 94 aa10.29□□□□□ -0.76
HDAC6-229ENST00000486665 DEFA3P59666 94 aa10.29□□□□□ -0.76
HDAC6-229ENST00000486665 ZNF816Q0VGE8 651 aaPredicted RBP10.29□□□□□ -0.76
HDAC6-229ENST00000486665 MSMO1Q15800 293 aa10.29□□□□□ -0.76
HDAC6-229ENST00000486665 FAM71F2Q6NXP2 309 aa10.29□□□□□ -0.76
HDAC6-229ENST00000486665 GLDNQ6ZMI3 551 aaPredicted RBP10.29□□□□□ -0.76
HDAC6-229ENST00000486665 NRARPQ7Z6K4 114 aa10.29□□□□□ -0.76
HDAC6-229ENST00000486665 TGIF2LXQ8IUE1 241 aa10.29□□□□□ -0.76
HDAC6-229ENST00000486665 ZNF383Q8NA42 475 aa10.29□□□□□ -0.76
HDAC6-229ENST00000486665 ZBTB34Q8NCN2 500 aa10.29□□□□□ -0.76
HDAC6-229ENST00000486665 ADAD2Q8NCV1 583 aaKnown RBP10.29□□□□□ -0.76
HDAC6-229ENST00000486665 BVESQ8NE79 360 aa10.29□□□□□ -0.76
HDAC6-229ENST00000486665 ZFAND1Q8TCF1 268 aa10.29□□□□□ -0.76
HDAC6-229ENST00000486665 AKR1E2Q96JD6 320 aa10.29□□□□□ -0.76
HDAC6-229ENST00000486665 ZNF48Q96MX3 618 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms