RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 J3QW42 95 aa7.59□□□□□ -1.19
COL12A1-208ENST00000486533 K7N7A8 449 aa7.59□□□□□ -1.19
COL12A1-208ENST00000486533 UBE2CO00762 179 aa7.59□□□□□ -1.19
COL12A1-208ENST00000486533 NDUFS7O75251 213 aa7.59□□□□□ -1.19
COL12A1-208ENST00000486533 IGHV4-39P01824 125 aa7.59□□□□□ -1.19
COL12A1-208ENST00000486533 SNRNP70P08621 437 aaKnown RBP7.59□□□□□ -1.19
COL12A1-208ENST00000486533 MMP7P09237 267 aaPredicted RBP7.59□□□□□ -1.19
COL12A1-208ENST00000486533 UCP1P25874 307 aa7.59□□□□□ -1.19
COL12A1-208ENST00000486533 GNRHRP30968 328 aa7.59□□□□□ -1.19
COL12A1-208ENST00000486533 PRDX4Q13162 271 aa7.59□□□□□ -1.19
COL12A1-208ENST00000486533 CEACAM21Q3KPI0 293 aa7.59□□□□□ -1.19
COL12A1-208ENST00000486533 SP6Q3SY56 376 aa7.59□□□□□ -1.19
COL12A1-208ENST00000486533 TMEM182Q6ZP80 229 aaPredicted RBP7.59□□□□□ -1.19
COL12A1-208ENST00000486533 TBC1D26Q86UD7 250 aa7.59□□□□□ -1.19
COL12A1-208ENST00000486533 ZNF573Q86YE8 665 aa7.59□□□□□ -1.19
COL12A1-208ENST00000486533 C1QL4Q86Z23 238 aa7.59□□□□□ -1.19
COL12A1-208ENST00000486533 Q8IYB0 196 aa7.59□□□□□ -1.19
COL12A1-208ENST00000486533 C17orf78Q8N4C9 275 aa7.59□□□□□ -1.19
COL12A1-208ENST00000486533 HSD17B11Q8NBQ5 300 aa7.59□□□□□ -1.19
COL12A1-208ENST00000486533 MAPK1IP1LQ8NDC0 245 aa7.59□□□□□ -1.19
COL12A1-208ENST00000486533 C1orf162Q8NEQ5 155 aaPredicted RBP7.59□□□□□ -1.19
COL12A1-208ENST00000486533 CD300LFQ8TDQ1 290 aa7.59□□□□□ -1.19
COL12A1-208ENST00000486533 HIST1H2BAQ96A08 127 aa7.59□□□□□ -1.19
COL12A1-208ENST00000486533 RAB40CQ96S21 281 aa7.59□□□□□ -1.19
COL12A1-208ENST00000486533 ADAT1Q9BUB4 502 aaKnown RBP7.59□□□□□ -1.19
COL12A1-208ENST00000486533 PKIBQ9C010 78 aa7.59□□□□□ -1.19
COL12A1-208ENST00000486533 HIPK2Q9H2X6 1198 aa7.59□□□□□ -1.19
COL12A1-208ENST00000486533 SIRT7Q9NRC8 400 aa7.59□□□□□ -1.19
COL12A1-208ENST00000486533 COA4Q9NYJ1 87 aa7.59□□□□□ -1.19
COL12A1-208ENST00000486533 METTL1Q9UBP6 276 aaKnown RBP7.59□□□□□ -1.19
COL12A1-208ENST00000486533 ATP23Q9Y6H3 246 aa7.59□□□□□ -1.19
COL12A1-208ENST00000486533 A0A1B0GU03 582 aa7.59□□□□□ -1.2
COL12A1-208ENST00000486533 MEX3AA1L020 520 aaKnown RBP7.59□□□□□ -1.2
COL12A1-208ENST00000486533 CXorf65A6NEN9 183 aa7.59□□□□□ -1.2
COL12A1-208ENST00000486533 RBFOX3A6NFN3 312 aa7.59□□□□□ -1.2
COL12A1-208ENST00000486533 B4DEV8 164 aa7.59□□□□□ -1.2
COL12A1-208ENST00000486533 INAFM1C9JVW0 142 aa7.59□□□□□ -1.2
COL12A1-208ENST00000486533 E7EQL1 145 aa7.59□□□□□ -1.2
COL12A1-208ENST00000486533 NAPSAO96009 420 aa7.59□□□□□ -1.2
COL12A1-208ENST00000486533 IFNA1P01562 189 aa7.59□□□□□ -1.2
COL12A1-208ENST00000486533 RAB5AP20339 215 aa7.59□□□□□ -1.2
COL12A1-208ENST00000486533 NFYBP25208 207 aa7.59□□□□□ -1.2
COL12A1-208ENST00000486533 MAS1LP35410 378 aa7.59□□□□□ -1.2
COL12A1-208ENST00000486533 TAGLN2P37802 199 aaKnown RBP7.59□□□□□ -1.2
COL12A1-208ENST00000486533 CD200P41217 278 aa7.59□□□□□ -1.2
COL12A1-208ENST00000486533 HIKESHIQ53FT3 197 aa7.59□□□□□ -1.2
COL12A1-208ENST00000486533 AKIRIN2Q53H80 203 aa7.59□□□□□ -1.2
COL12A1-208ENST00000486533 SLC25A24Q6NUK1 477 aa7.59□□□□□ -1.2
COL12A1-208ENST00000486533 FIP1L1Q6UN15 594 aaKnown RBP7.59□□□□□ -1.2
COL12A1-208ENST00000486533 DTX2Q86UW9 622 aa7.59□□□□□ -1.2
COL12A1-208ENST00000486533 SELENOHQ8IZQ5 122 aaKnown RBP7.59□□□□□ -1.2
COL12A1-208ENST00000486533 MUC15Q8N387 334 aa7.59□□□□□ -1.2
COL12A1-208ENST00000486533 WDR31Q8NA23 367 aa7.59□□□□□ -1.2
COL12A1-208ENST00000486533 OR52M1Q8NGK5 317 aa7.59□□□□□ -1.2
COL12A1-208ENST00000486533 OR10G4Q8NGN3 311 aa7.59□□□□□ -1.2
COL12A1-208ENST00000486533 RNASE11Q8TAA1 199 aaKnown RBP7.59□□□□□ -1.2
COL12A1-208ENST00000486533 ATP5SQ99766 215 aa7.59□□□□□ -1.2
COL12A1-208ENST00000486533 ZNF251Q9BRH9 671 aa7.59□□□□□ -1.2
COL12A1-208ENST00000486533 ABCA1O95477 2261 aa7.58□□□□□ -1.2
COL12A1-208ENST00000486533 IGKV1-12A0A0C4DH73 117 aa7.58□□□□□ -1.2
COL12A1-208ENST00000486533 A6NJY4 79 aa7.58□□□□□ -1.2
COL12A1-208ENST00000486533 PCP4L1A6NKN8 68 aa7.58□□□□□ -1.2
COL12A1-208ENST00000486533 NPIPB11E5RHQ5 1161 aa7.58□□□□□ -1.2
COL12A1-208ENST00000486533 SSSCA1O60232 199 aa7.58□□□□□ -1.2
COL12A1-208ENST00000486533 TUSC2O75896 110 aa7.58□□□□□ -1.2
COL12A1-208ENST00000486533 IGKV1D-12P01611 117 aa7.58□□□□□ -1.2
COL12A1-208ENST00000486533 HSPB1P04792 205 aaKnown RBP7.58□□□□□ -1.2
COL12A1-208ENST00000486533 SERPINE2P07093 398 aa7.58□□□□□ -1.2
COL12A1-208ENST00000486533 APLNRP35414 380 aa7.58□□□□□ -1.2
COL12A1-208ENST00000486533 SULT1A1P50225 295 aa7.58□□□□□ -1.2
COL12A1-208ENST00000486533 FABP6P51161 128 aa7.58□□□□□ -1.2
COL12A1-208ENST00000486533 B2MP61769 119 aa7.58□□□□□ -1.2
COL12A1-208ENST00000486533 HBG1P69891 147 aa7.58□□□□□ -1.2
COL12A1-208ENST00000486533 HBG2P69892 147 aa7.58□□□□□ -1.2
COL12A1-208ENST00000486533 CTAG1AP78358 180 aa7.58□□□□□ -1.2
COL12A1-208ENST00000486533 PNRC1Q12796 327 aaPredicted RBP7.58□□□□□ -1.2
COL12A1-208ENST00000486533 KRBOX4Q5JUW0 171 aa7.58□□□□□ -1.2
COL12A1-208ENST00000486533 OR56B2PQ8NGI1 322 aa7.58□□□□□ -1.2
COL12A1-208ENST00000486533 SCGB1C1Q8TD33 95 aa7.58□□□□□ -1.2
COL12A1-208ENST00000486533 LSM10Q969L4 123 aaKnown RBP7.58□□□□□ -1.2
COL12A1-208ENST00000486533 CLCC1Q96S66 551 aa7.58□□□□□ -1.2
COL12A1-208ENST00000486533 NIPSNAP3BQ9BS92 247 aa7.58□□□□□ -1.2
COL12A1-208ENST00000486533 CBLN4Q9NTU7 201 aa7.58□□□□□ -1.2
COL12A1-208ENST00000486533 TREM2Q9NZC2 230 aa7.58□□□□□ -1.2
COL12A1-208ENST00000486533 CR1P17927 2039 aa7.57□□□□□ -1.2
COL12A1-208ENST00000486533 TRAV1-1A0A0B4J248 108 aa7.57□□□□□ -1.2
COL12A1-208ENST00000486533 C5orf52A6NGY3 159 aa7.57□□□□□ -1.2
COL12A1-208ENST00000486533 ADAM20O43506 726 aa7.57□□□□□ -1.2
COL12A1-208ENST00000486533 NDUFS6O75380 124 aaKnown RBP7.57□□□□□ -1.2
COL12A1-208ENST00000486533 OR2C1O95371 312 aa7.57□□□□□ -1.2
COL12A1-208ENST00000486533 OR8U8P0C7N1 319 aa7.57□□□□□ -1.2
COL12A1-208ENST00000486533 ANOS1P23352 680 aa7.57□□□□□ -1.2
COL12A1-208ENST00000486533 LMO1P25800 156 aa7.57□□□□□ -1.2
COL12A1-208ENST00000486533 ATP6V0CP27449 155 aa7.57□□□□□ -1.2
COL12A1-208ENST00000486533 HAAOP46952 286 aa7.57□□□□□ -1.2
COL12A1-208ENST00000486533 TAS2R30P59541 319 aa7.57□□□□□ -1.2
COL12A1-208ENST00000486533 UBE2NP61088 152 aaKnown RBP7.57□□□□□ -1.2
COL12A1-208ENST00000486533 GNG3P63215 75 aa7.57□□□□□ -1.2
COL12A1-208ENST00000486533 HLA-DRB3P79483 266 aa7.57□□□□□ -1.2
COL12A1-208ENST00000486533 ARF1P84077 181 aaKnown RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms