RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 FAM78BQ5VT40 261 aa9.46□□□□□ -0.89
HDAC6-228ENST00000486227 H1FOOQ8IZA3 346 aaPredicted RBP9.46□□□□□ -0.89
HDAC6-228ENST00000486227 TNFRSF19Q9NS68 423 aa9.46□□□□□ -0.89
HDAC6-228ENST00000486227 PPP1CCP36873 323 aaKnown RBP9.46□□□□□ -0.9
HDAC6-228ENST00000486227 UBE2G2P60604 165 aa9.46□□□□□ -0.9
HDAC6-228ENST00000486227 SPACA3Q8IXA5 215 aa9.46□□□□□ -0.9
HDAC6-228ENST00000486227 GBF1Q92538 1859 aa9.46□□□□□ -0.9
HDAC6-228ENST00000486227 C5orf52A6NGY3 159 aa9.46□□□□□ -0.9
HDAC6-228ENST00000486227 H0YL77 283 aa9.46□□□□□ -0.9
HDAC6-228ENST00000486227 CLPSP04118 112 aa9.46□□□□□ -0.9
HDAC6-228ENST00000486227 BCL2P10415 239 aa9.46□□□□□ -0.9
HDAC6-228ENST00000486227 COX5BP10606 129 aa9.46□□□□□ -0.9
HDAC6-228ENST00000486227 PRDX2P32119 198 aa9.46□□□□□ -0.9
HDAC6-228ENST00000486227 PTTG1IPP53801 180 aa9.46□□□□□ -0.9
HDAC6-228ENST00000486227 GAMTQ14353 236 aa9.46□□□□□ -0.9
HDAC6-228ENST00000486227 ETV3LQ6ZN32 361 aa9.46□□□□□ -0.9
HDAC6-228ENST00000486227 TCTEX1D1Q8N7M0 179 aa9.46□□□□□ -0.9
HDAC6-228ENST00000486227 ZNF708P17019 499 aa9.45□□□□□ -0.9
HDAC6-228ENST00000486227 BMI1P35226 326 aa9.45□□□□□ -0.9
HDAC6-228ENST00000486227 ZNF154Q13106 437 aa9.45□□□□□ -0.9
HDAC6-228ENST00000486227 UNC119Q13432 240 aa9.45□□□□□ -0.9
HDAC6-228ENST00000486227 LINC00596Q86U02 117 aa9.45□□□□□ -0.9
HDAC6-228ENST00000486227 TEX29Q8N6K0 151 aa9.45□□□□□ -0.9
HDAC6-228ENST00000486227 DPF1Q92782 380 aa9.45□□□□□ -0.9
HDAC6-228ENST00000486227 ADTRPQ96IZ2 230 aa9.45□□□□□ -0.9
HDAC6-228ENST00000486227 Q96M66 194 aa9.45□□□□□ -0.9
HDAC6-228ENST00000486227 MTCH1Q9NZJ7 389 aa9.45□□□□□ -0.9
HDAC6-228ENST00000486227 IGLV3-32A0A0A0MS00 114 aa9.45□□□□□ -0.9
HDAC6-228ENST00000486227 OR4A8P0C604 315 aa9.45□□□□□ -0.9
HDAC6-228ENST00000486227 TAS2R45P59539 299 aa9.45□□□□□ -0.9
HDAC6-228ENST00000486227 OR1P1Q8NH06 330 aa9.45□□□□□ -0.9
HDAC6-228ENST00000486227 LINC00470Q9BZP3 86 aa9.45□□□□□ -0.9
HDAC6-228ENST00000486227 MANBALQ9NQG1 85 aa9.45□□□□□ -0.9
HDAC6-228ENST00000486227 THYN1Q9P016 225 aa9.45□□□□□ -0.9
HDAC6-228ENST00000486227 WIPI2Q9Y4P8 454 aa9.45□□□□□ -0.9
HDAC6-228ENST00000486227 TGIF2-C20orf24A0A0A6YYL0 155 aa9.45□□□□□ -0.9
HDAC6-228ENST00000486227 SOX15O60248 233 aa9.45□□□□□ -0.9
HDAC6-228ENST00000486227 TOX4O94842 621 aa9.45□□□□□ -0.9
HDAC6-228ENST00000486227 OR2H2O95918 312 aa9.45□□□□□ -0.9
HDAC6-228ENST00000486227 COL10A1Q03692 680 aa9.45□□□□□ -0.9
HDAC6-228ENST00000486227 FAM162BQ5T6X4 162 aa9.45□□□□□ -0.9
HDAC6-228ENST00000486227 R3HDM4Q96D70 268 aa9.45□□□□□ -0.9
HDAC6-228ENST00000486227 FRMPD3Q5JV73 1810 aa9.45□□□□□ -0.9
HDAC6-228ENST00000486227 TANC1Q9C0D5 1861 aa9.45□□□□□ -0.9
HDAC6-228ENST00000486227 C19orf67A6NJJ6 358 aa9.44□□□□□ -0.9
HDAC6-228ENST00000486227 FAM157AC9JC47 383 aa9.44□□□□□ -0.9
HDAC6-228ENST00000486227 PSG2P11465 335 aa9.44□□□□□ -0.9
HDAC6-228ENST00000486227 ATP5J2P56134 94 aa9.44□□□□□ -0.9
HDAC6-228ENST00000486227 SRSF3P84103 164 aaKnown RBP9.44□□□□□ -0.9
HDAC6-228ENST00000486227 KCNMB1Q16558 191 aa9.44□□□□□ -0.9
HDAC6-228ENST00000486227 FFAR4Q5NUL3 377 aa9.44□□□□□ -0.9
HDAC6-228ENST00000486227 ZNF880Q6PDB4 577 aa9.44□□□□□ -0.9
HDAC6-228ENST00000486227 KLF14Q8TD94 323 aaPredicted RBP9.44□□□□□ -0.9
HDAC6-228ENST00000486227 OR2V2Q96R30 315 aa9.44□□□□□ -0.9
HDAC6-228ENST00000486227 COLCA2A8K830 154 aa9.44□□□□□ -0.9
HDAC6-228ENST00000486227 TRGC1P0CF51 173 aa9.44□□□□□ -0.9
HDAC6-228ENST00000486227 PGA5P0DJD9 388 aa9.44□□□□□ -0.9
HDAC6-228ENST00000486227 RND3P61587 244 aa9.44□□□□□ -0.9
HDAC6-228ENST00000486227 TMEM45BQ96B21 275 aa9.44□□□□□ -0.9
HDAC6-228ENST00000486227 SLC25A22Q9H936 323 aa9.44□□□□□ -0.9
HDAC6-228ENST00000486227 HSF4Q9ULV5 492 aa9.44□□□□□ -0.9
HDAC6-228ENST00000486227 LOC390937A0A1W2PQ73 354 aa9.44□□□□□ -0.9
HDAC6-228ENST00000486227 A1L4Q6 167 aa9.44□□□□□ -0.9
HDAC6-228ENST00000486227 SYNGR3O43761 229 aa9.44□□□□□ -0.9
HDAC6-228ENST00000486227 GLIPR1P48060 266 aa9.44□□□□□ -0.9
HDAC6-228ENST00000486227 CEBPDP49716 269 aaPredicted RBP9.44□□□□□ -0.9
HDAC6-228ENST00000486227 BPIFB3P59826 476 aa9.44□□□□□ -0.9
HDAC6-228ENST00000486227 OR4S2Q8NH73 311 aa9.44□□□□□ -0.9
HDAC6-228ENST00000486227 GPHA2Q96T91 129 aa9.44□□□□□ -0.9
HDAC6-228ENST00000486227 GP6Q9HCN6 339 aa9.44□□□□□ -0.9
HDAC6-228ENST00000486227 ELOVL5Q9NYP7 299 aa9.44□□□□□ -0.9
HDAC6-228ENST00000486227 MUC6Q6W4X9 2439 aa9.44□□□□□ -0.9
HDAC6-228ENST00000486227 A0A1W2PPE3 182 aa9.44□□□□□ -0.9
HDAC6-228ENST00000486227 TMEM252Q8N6L7 170 aa9.44□□□□□ -0.9
HDAC6-228ENST00000486227 ITLN1Q8WWA0 313 aa9.44□□□□□ -0.9
HDAC6-228ENST00000486227 DLL3Q9NYJ7 618 aa9.44□□□□□ -0.9
HDAC6-228ENST00000486227 SEMA5BQ9P283 1151 aa9.44□□□□□ -0.9
HDAC6-228ENST00000486227 RNF24Q9Y225 148 aa9.44□□□□□ -0.9
HDAC6-228ENST00000486227 HSBP1O75506 76 aa9.43□□□□□ -0.9
HDAC6-228ENST00000486227 RNF224P0DH78 156 aa9.43□□□□□ -0.9
HDAC6-228ENST00000486227 CRISP2P16562 243 aa9.43□□□□□ -0.9
HDAC6-228ENST00000486227 F2RP25116 425 aa9.43□□□□□ -0.9
HDAC6-228ENST00000486227 RPL31P62899 125 aaKnown RBP9.43□□□□□ -0.9
HDAC6-228ENST00000486227 ATP6V1FQ16864 119 aa9.43□□□□□ -0.9
HDAC6-228ENST00000486227 OR8G5Q8NG78 346 aa9.43□□□□□ -0.9
HDAC6-228ENST00000486227 PCGF1Q9BSM1 259 aa9.43□□□□□ -0.9
HDAC6-228ENST00000486227 ZNF552Q9H707 407 aaPredicted RBP9.43□□□□□ -0.9
HDAC6-228ENST00000486227 ESPL1Q14674 2120 aa9.43□□□□□ -0.9
HDAC6-228ENST00000486227 DVL1O14640 695 aa9.43□□□□□ -0.9
HDAC6-228ENST00000486227 OR10J4P0C629 311 aa9.43□□□□□ -0.9
HDAC6-228ENST00000486227 PMCHP20382 165 aa9.43□□□□□ -0.9
HDAC6-228ENST00000486227 TMEM50BP56557 158 aa9.43□□□□□ -0.9
HDAC6-228ENST00000486227 OR5I1Q13606 314 aa9.43□□□□□ -0.9
HDAC6-228ENST00000486227 TGIF2LXQ8IUE1 241 aa9.43□□□□□ -0.9
HDAC6-228ENST00000486227 SLC24A4Q8NFF2 622 aa9.43□□□□□ -0.9
HDAC6-228ENST00000486227 OR10G4Q8NGN3 311 aa9.43□□□□□ -0.9
HDAC6-228ENST00000486227 OR10G9Q8NGN4 311 aa9.43□□□□□ -0.9
HDAC6-228ENST00000486227 OR10G7Q8NGN6 311 aa9.43□□□□□ -0.9
HDAC6-228ENST00000486227 VSTM2AQ8TAG5 236 aa9.43□□□□□ -0.9
HDAC6-228ENST00000486227 GFI1Q99684 422 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms