RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 A3GALT2U3KPV4 340 aa13.3□□□□□ -0.28
SMC4-216ENST00000485645 OVOL1O14753 267 aa13.29□□□□□ -0.28
SMC4-216ENST00000485645 HSPA12AO43301 675 aa13.29□□□□□ -0.28
SMC4-216ENST00000485645 RBBP9O75884 186 aa13.29□□□□□ -0.28
SMC4-216ENST00000485645 CPEP16870 476 aa13.29□□□□□ -0.28
SMC4-216ENST00000485645 ZBTB25P24278 435 aa13.29□□□□□ -0.28
SMC4-216ENST00000485645 CEACAM6P40199 344 aa13.29□□□□□ -0.28
SMC4-216ENST00000485645 MAP2K4P45985 399 aa13.29□□□□□ -0.28
SMC4-216ENST00000485645 HLA-DRB3P79483 266 aa13.29□□□□□ -0.28
SMC4-216ENST00000485645 P2RY14Q15391 338 aa13.29□□□□□ -0.28
SMC4-216ENST00000485645 TBCEQ15813 527 aaPredicted RBP13.29□□□□□ -0.28
SMC4-216ENST00000485645 C19orf54Q5BKX5 351 aa13.29□□□□□ -0.28
SMC4-216ENST00000485645 ZNF429Q86V71 674 aa13.29□□□□□ -0.28
SMC4-216ENST00000485645 FAM89BQ8N5H3 189 aa13.29□□□□□ -0.28
SMC4-216ENST00000485645 OR5AN1Q8NGI8 311 aa13.29□□□□□ -0.28
SMC4-216ENST00000485645 ABHD5Q8WTS1 349 aa13.29□□□□□ -0.28
SMC4-216ENST00000485645 DCUN1D4Q92564 292 aa13.29□□□□□ -0.28
SMC4-216ENST00000485645 TMEM203Q969S6 136 aa13.29□□□□□ -0.28
SMC4-216ENST00000485645 MGLLQ99685 303 aa13.29□□□□□ -0.28
SMC4-216ENST00000485645 ASCL2Q99929 193 aa13.29□□□□□ -0.28
SMC4-216ENST00000485645 RNF5Q99942 180 aa13.29□□□□□ -0.28
SMC4-216ENST00000485645 HDHD3Q9BSH5 251 aaPredicted RBP13.29□□□□□ -0.28
SMC4-216ENST00000485645 C11orf54Q9H0W9 315 aaPredicted RBP13.29□□□□□ -0.28
SMC4-216ENST00000485645 ALX4Q9H161 411 aaPredicted RBP13.29□□□□□ -0.28
SMC4-216ENST00000485645 OR1A1Q9P1Q5 309 aa13.29□□□□□ -0.28
SMC4-216ENST00000485645 RNF150Q9ULK6 438 aa13.29□□□□□ -0.28
SMC4-216ENST00000485645 NUBP2Q9Y5Y2 271 aa13.29□□□□□ -0.28
SMC4-216ENST00000485645 LINC01619G3V211 115 aa13.28□□□□□ -0.28
SMC4-216ENST00000485645 FCN1O00602 326 aa13.28□□□□□ -0.28
SMC4-216ENST00000485645 SLC17A2O00624 439 aa13.28□□□□□ -0.28
SMC4-216ENST00000485645 SOX15O60248 233 aa13.28□□□□□ -0.28
SMC4-216ENST00000485645 MRPS14O60783 128 aaKnown RBP13.28□□□□□ -0.28
SMC4-216ENST00000485645 GABARAPL2P60520 117 aa13.28□□□□□ -0.28
SMC4-216ENST00000485645 TRAM1Q15629 374 aa13.28□□□□□ -0.28
SMC4-216ENST00000485645 TOLLIPQ9H0E2 274 aa13.28□□□□□ -0.28
SMC4-216ENST00000485645 HSF4Q9ULV5 492 aa13.28□□□□□ -0.28
SMC4-216ENST00000485645 AK6Q9Y3D8 172 aaKnown RBP13.28□□□□□ -0.28
SMC4-216ENST00000485645 SMAD5-AS1Q9Y6J3 95 aa13.28□□□□□ -0.28
SMC4-216ENST00000485645 SAP30O75446 220 aa13.27□□□□□ -0.29
SMC4-216ENST00000485645 SCTP09683 121 aa13.27□□□□□ -0.29
SMC4-216ENST00000485645 PSMA1P25786 263 aaKnown RBP13.27□□□□□ -0.29
SMC4-216ENST00000485645 ACTBL2Q562R1 376 aa13.27□□□□□ -0.29
SMC4-216ENST00000485645 PYHIN1Q6K0P9 492 aa13.27□□□□□ -0.29
SMC4-216ENST00000485645 CD200R1LQ6Q8B3 271 aa13.27□□□□□ -0.29
SMC4-216ENST00000485645 TMEM91Q6ZNR0 172 aa13.27□□□□□ -0.29
SMC4-216ENST00000485645 PPP1R27Q86WC6 154 aa13.27□□□□□ -0.29
SMC4-216ENST00000485645 CASTOR1Q8WTX7 329 aa13.27□□□□□ -0.29
SMC4-216ENST00000485645 DLX4Q92988 240 aaPredicted RBP13.27□□□□□ -0.29
SMC4-216ENST00000485645 PTX4Q96A99 478 aa13.27□□□□□ -0.29
SMC4-216ENST00000485645 CLCC1Q96S66 551 aa13.27□□□□□ -0.29
SMC4-216ENST00000485645 GFI1Q99684 422 aa13.27□□□□□ -0.29
SMC4-216ENST00000485645 Q9N2K0 584 aa13.27□□□□□ -0.29
SMC4-216ENST00000485645 ACOT13Q9NPJ3 140 aa13.27□□□□□ -0.29
SMC4-216ENST00000485645 C12orf4Q9NQ89 552 aa13.27□□□□□ -0.29
SMC4-216ENST00000485645 FOXI3A8MTJ6 420 aaPredicted RBP13.26□□□□□ -0.29
SMC4-216ENST00000485645 ARL6IP5O75915 188 aa13.26□□□□□ -0.29
SMC4-216ENST00000485645 LGALS1P09382 135 aaKnown RBP13.26□□□□□ -0.29
SMC4-216ENST00000485645 EGR2P11161 476 aaPredicted RBP13.26□□□□□ -0.29
SMC4-216ENST00000485645 CD40LGP29965 261 aa13.26□□□□□ -0.29
SMC4-216ENST00000485645 VEGFCP49767 419 aa13.26□□□□□ -0.29
SMC4-216ENST00000485645 SLURP1P55000 103 aa13.26□□□□□ -0.29
SMC4-216ENST00000485645 TMEM50BP56557 158 aa13.26□□□□□ -0.29
SMC4-216ENST00000485645 RPS25P62851 125 aaKnown RBP13.26□□□□□ -0.29
SMC4-216ENST00000485645 PSG5Q15238 335 aa13.26□□□□□ -0.29
SMC4-216ENST00000485645 RAB11BQ15907 218 aa13.26□□□□□ -0.29
SMC4-216ENST00000485645 AKIRIN2Q53H80 203 aa13.26□□□□□ -0.29
SMC4-216ENST00000485645 UNQ5815/PRO19632Q6UWF5 114 aa13.26□□□□□ -0.29
SMC4-216ENST00000485645 ZNF562Q6V9R5 426 aa13.26□□□□□ -0.29
SMC4-216ENST00000485645 ZNF367Q7RTV3 350 aa13.26□□□□□ -0.29
SMC4-216ENST00000485645 DRAXINQ8NBI3 349 aaPredicted RBP13.26□□□□□ -0.29
SMC4-216ENST00000485645 ARHGAP5-AS1Q96IT6 56 aa13.26□□□□□ -0.29
SMC4-216ENST00000485645 CMSS1Q9BQ75 279 aaKnown RBP13.26□□□□□ -0.29
SMC4-216ENST00000485645 FAM103A1Q9BTL3 118 aaKnown RBP13.26□□□□□ -0.29
SMC4-216ENST00000485645 YTHDF1Q9BYJ9 559 aaKnown RBP13.26□□□□□ -0.29
SMC4-216ENST00000485645 METTL1Q9UBP6 276 aaKnown RBP13.26□□□□□ -0.29
SMC4-216ENST00000485645 ZNF221Q9UK13 617 aa13.26□□□□□ -0.29
SMC4-216ENST00000485645 GAB2Q9UQC2 676 aa13.26□□□□□ -0.29
SMC4-216ENST00000485645 HUWE1Q7Z6Z7 4374 aaKnown RBP13.25□□□□□ -0.29
SMC4-216ENST00000485645 IGHV4OR15-8A0A075B7B6 117 aa13.25□□□□□ -0.29
SMC4-216ENST00000485645 A0A087WW49 117 aa13.25□□□□□ -0.29
SMC4-216ENST00000485645 PROP1O75360 226 aa13.25□□□□□ -0.29
SMC4-216ENST00000485645 RANBP1P43487 201 aa13.25□□□□□ -0.29
SMC4-216ENST00000485645 RPS16P62249 146 aaKnown RBP13.25□□□□□ -0.29
SMC4-216ENST00000485645 LFNGQ8NES3 379 aa13.25□□□□□ -0.29
SMC4-216ENST00000485645 OR56B1Q8NGI3 324 aa13.25□□□□□ -0.29
SMC4-216ENST00000485645 TSNAXQ99598 290 aaKnown RBP13.25□□□□□ -0.29
SMC4-216ENST00000485645 PECRQ9BY49 303 aa13.25□□□□□ -0.29
SMC4-216ENST00000485645 TPSG1Q9NRR2 321 aa13.25□□□□□ -0.29
SMC4-216ENST00000485645 RYR3Q15413 4870 aa13.25□□□□□ -0.29
SMC4-216ENST00000485645 SPDEFO95238 335 aa13.24□□□□□ -0.29
SMC4-216ENST00000485645 CA2P00918 260 aa13.24□□□□□ -0.29
SMC4-216ENST00000485645 IGHV3-11P01762 117 aa13.24□□□□□ -0.29
SMC4-216ENST00000485645 IGKV1-16P04430 117 aa13.24□□□□□ -0.29
SMC4-216ENST00000485645 CALRP27797 417 aaKnown RBP13.24□□□□□ -0.29
SMC4-216ENST00000485645 CLDN12P56749 244 aa13.24□□□□□ -0.29
SMC4-216ENST00000485645 ACSM6Q6P461 480 aa13.24□□□□□ -0.29
SMC4-216ENST00000485645 ZNF383Q8NA42 475 aa13.24□□□□□ -0.29
SMC4-216ENST00000485645 FAM3DQ96BQ1 224 aa13.24□□□□□ -0.29
SMC4-216ENST00000485645 FLYWCH2Q96CP2 140 aaKnown RBP13.24□□□□□ -0.29
SMC4-216ENST00000485645 MS4A10Q96PG2 267 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms