RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 MSMO1Q15800 293 aa6.66□□□□□ -1.34
SF3A1-208ENST00000485618 RTL8BQ17RB0 113 aa6.66□□□□□ -1.34
SF3A1-208ENST00000485618 ARSJQ5FYB0 599 aaPredicted RBP6.66□□□□□ -1.34
SF3A1-208ENST00000485618 RNASE10Q5GAN6 216 aaKnown RBP6.66□□□□□ -1.34
SF3A1-208ENST00000485618 DHRS11Q6UWP2 260 aa6.66□□□□□ -1.34
SF3A1-208ENST00000485618 ZNF833PQ6ZTB9 187 aa6.66□□□□□ -1.34
SF3A1-208ENST00000485618 OVCH2Q7RTZ1 564 aa6.66□□□□□ -1.34
SF3A1-208ENST00000485618 ZNF645Q8N7E2 425 aa6.66□□□□□ -1.34
SF3A1-208ENST00000485618 GVQW1Q8N7I0 195 aa6.66□□□□□ -1.34
SF3A1-208ENST00000485618 TMEM229BQ8NBD8 167 aa6.66□□□□□ -1.34
SF3A1-208ENST00000485618 OR56B4Q8NH76 319 aa6.66□□□□□ -1.34
SF3A1-208ENST00000485618 C17orf50Q8WW18 174 aa6.66□□□□□ -1.34
SF3A1-208ENST00000485618 DEDD2Q8WXF8 326 aa6.66□□□□□ -1.34
SF3A1-208ENST00000485618 DUX5Q96PT3 197 aa6.66□□□□□ -1.34
SF3A1-208ENST00000485618 HSD17B10Q99714 261 aaKnown RBP6.66□□□□□ -1.34
SF3A1-208ENST00000485618 RNF5Q99942 180 aa6.66□□□□□ -1.34
SF3A1-208ENST00000485618 CHIAQ9BZP6 476 aa6.66□□□□□ -1.34
SF3A1-208ENST00000485618 PRSS22Q9GZN4 317 aa6.66□□□□□ -1.34
SF3A1-208ENST00000485618 MIXL1Q9H2W2 232 aa6.66□□□□□ -1.34
SF3A1-208ENST00000485618 RANBP3Q9H6Z4 567 aaPredicted RBP6.66□□□□□ -1.34
SF3A1-208ENST00000485618 BEX1Q9HBH7 125 aa6.66□□□□□ -1.34
SF3A1-208ENST00000485618 ESM1Q9NQ30 184 aa6.66□□□□□ -1.34
SF3A1-208ENST00000485618 MTFP1Q9UDX5 166 aa6.66□□□□□ -1.34
SF3A1-208ENST00000485618 RNF150Q9ULK6 438 aa6.66□□□□□ -1.34
SF3A1-208ENST00000485618 SOX21Q9Y651 276 aaPredicted RBP6.66□□□□□ -1.34
SF3A1-208ENST00000485618 SAA2-SAA4A0A096LPE2 208 aa6.65□□□□□ -1.34
SF3A1-208ENST00000485618 MEIS3P1A6NDR6 274 aa6.65□□□□□ -1.34
SF3A1-208ENST00000485618 A6NDX4 124 aa6.65□□□□□ -1.34
SF3A1-208ENST00000485618 NCBP2LA6PVI3 153 aaKnown RBP6.65□□□□□ -1.34
SF3A1-208ENST00000485618 DISC1C4P0D8 188 aa6.65□□□□□ -1.34
SF3A1-208ENST00000485618 M0R1X1 148 aa6.65□□□□□ -1.34
SF3A1-208ENST00000485618 SLC31A2O15432 143 aa6.65□□□□□ -1.34
SF3A1-208ENST00000485618 GSTZ1O43708 216 aaPredicted RBP6.65□□□□□ -1.34
SF3A1-208ENST00000485618 PEX14O75381 377 aa6.65□□□□□ -1.34
SF3A1-208ENST00000485618 OR2F2O95006 317 aa6.65□□□□□ -1.34
SF3A1-208ENST00000485618 NDUFA7O95182 113 aa6.65□□□□□ -1.34
SF3A1-208ENST00000485618 PMP2P02689 132 aa6.65□□□□□ -1.34
SF3A1-208ENST00000485618 SAA2P0DJI9 122 aaPredicted RBP6.65□□□□□ -1.34
SF3A1-208ENST00000485618 HKR1P10072 659 aa6.65□□□□□ -1.34
SF3A1-208ENST00000485618 NFYAP23511 347 aaPredicted RBP6.65□□□□□ -1.34
SF3A1-208ENST00000485618 HRH1P35367 487 aa6.65□□□□□ -1.34
SF3A1-208ENST00000485618 ETV6P41212 452 aa6.65□□□□□ -1.34
SF3A1-208ENST00000485618 REG1BP48304 166 aa6.65□□□□□ -1.34
SF3A1-208ENST00000485618 HERPUD1Q15011 391 aa6.65□□□□□ -1.34
SF3A1-208ENST00000485618 LY6EQ16553 131 aa6.65□□□□□ -1.34
SF3A1-208ENST00000485618 VAX1Q5SQQ9 334 aa6.65□□□□□ -1.34
SF3A1-208ENST00000485618 Q8N402 240 aa6.65□□□□□ -1.34
SF3A1-208ENST00000485618 ARRDC1Q8N5I2 433 aa6.65□□□□□ -1.34
SF3A1-208ENST00000485618 GDPD1Q8N9F7 314 aa6.65□□□□□ -1.34
SF3A1-208ENST00000485618 POC5Q8NA72 575 aa6.65□□□□□ -1.34
SF3A1-208ENST00000485618 OR6Q1Q8NGQ2 317 aa6.65□□□□□ -1.34
SF3A1-208ENST00000485618 OR52I2Q8NH67 350 aa6.65□□□□□ -1.34
SF3A1-208ENST00000485618 OR2T6Q8NHC8 308 aa6.65□□□□□ -1.34
SF3A1-208ENST00000485618 CD300LFQ8TDQ1 290 aa6.65□□□□□ -1.34
SF3A1-208ENST00000485618 SMIM4Q8WVI0 70 aa6.65□□□□□ -1.34
SF3A1-208ENST00000485618 S100ZQ8WXG8 99 aa6.65□□□□□ -1.34
SF3A1-208ENST00000485618 ABHD14BQ96IU4 210 aa6.65□□□□□ -1.34
SF3A1-208ENST00000485618 RBM14Q96PK6 669 aaKnown RBP6.65□□□□□ -1.34
SF3A1-208ENST00000485618 SCGB3A2Q96PL1 93 aa6.65□□□□□ -1.34
SF3A1-208ENST00000485618 ABHD1Q96SE0 405 aa6.65□□□□□ -1.34
SF3A1-208ENST00000485618 TSNAXQ99598 290 aaKnown RBP6.65□□□□□ -1.34
SF3A1-208ENST00000485618 ZNF251Q9BRH9 671 aa6.65□□□□□ -1.34
SF3A1-208ENST00000485618 AGMATQ9BSE5 352 aa6.65□□□□□ -1.34
SF3A1-208ENST00000485618 OR2D2Q9H210 308 aa6.65□□□□□ -1.34
SF3A1-208ENST00000485618 IFI27L2Q9H2X8 130 aa6.65□□□□□ -1.34
SF3A1-208ENST00000485618 KIAA1456Q9P272 454 aa6.65□□□□□ -1.34
SF3A1-208ENST00000485618 SCP2D1Q9UJQ7 156 aa6.65□□□□□ -1.34
SF3A1-208ENST00000485618 ANAPC10Q9UM13 185 aa6.65□□□□□ -1.34
SF3A1-208ENST00000485618 WASHC3Q9Y3C0 194 aa6.65□□□□□ -1.34
SF3A1-208ENST00000485618 A0A1W2PPI3 338 aa6.64□□□□□ -1.35
SF3A1-208ENST00000485618 FAM90A9PA6NNJ1 464 aa6.64□□□□□ -1.35
SF3A1-208ENST00000485618 CENPXA8MT69 81 aa6.64□□□□□ -1.35
SF3A1-208ENST00000485618 FGF16O43320 207 aa6.64□□□□□ -1.35
SF3A1-208ENST00000485618 TUSC2O75896 110 aa6.64□□□□□ -1.35
SF3A1-208ENST00000485618 RAB3DO95716 219 aa6.64□□□□□ -1.35
SF3A1-208ENST00000485618 PPYP01298 95 aa6.64□□□□□ -1.35
SF3A1-208ENST00000485618 IGKV1D-33P01593 117 aa6.64□□□□□ -1.35
SF3A1-208ENST00000485618 IGKV1-33P01594 117 aa6.64□□□□□ -1.35
SF3A1-208ENST00000485618 FCER2P06734 321 aa6.64□□□□□ -1.35
SF3A1-208ENST00000485618 SNRNP70P08621 437 aaKnown RBP6.64□□□□□ -1.35
SF3A1-208ENST00000485618 AKAIN1P0CW23 69 aa6.64□□□□□ -1.35
SF3A1-208ENST00000485618 PTHLHP12272 177 aa6.64□□□□□ -1.35
SF3A1-208ENST00000485618 KIR2DS2P43631 304 aa6.64□□□□□ -1.35
SF3A1-208ENST00000485618 LGALS7P47929 136 aa6.64□□□□□ -1.35
SF3A1-208ENST00000485618 RFX2P48378 723 aa6.64□□□□□ -1.35
SF3A1-208ENST00000485618 RAG2P55895 527 aa6.64□□□□□ -1.35
SF3A1-208ENST00000485618 CATR1Q13166 79 aa6.64□□□□□ -1.35
SF3A1-208ENST00000485618 LSAMPQ13449 338 aa6.64□□□□□ -1.35
SF3A1-208ENST00000485618 HABP2Q14520 560 aaPredicted RBP6.64□□□□□ -1.35
SF3A1-208ENST00000485618 HNF4GQ14541 408 aa6.64□□□□□ -1.35
SF3A1-208ENST00000485618 STEAP1BQ6NZ63 245 aa6.64□□□□□ -1.35
SF3A1-208ENST00000485618 ZNF66Q6ZN08 573 aa6.64□□□□□ -1.35
SF3A1-208ENST00000485618 Q6ZPA2 131 aa6.64□□□□□ -1.35
SF3A1-208ENST00000485618 PDPNQ86YL7 162 aa6.64□□□□□ -1.35
SF3A1-208ENST00000485618 LYSMD2Q8IV50 215 aa6.64□□□□□ -1.35
SF3A1-208ENST00000485618 DYNAPQ8N1N2 210 aa6.64□□□□□ -1.35
SF3A1-208ENST00000485618 ZFAND1Q8TCF1 268 aa6.64□□□□□ -1.35
SF3A1-208ENST00000485618 PIFOQ8TCI5 191 aa6.64□□□□□ -1.35
SF3A1-208ENST00000485618 SECTM1Q8WVN6 248 aa6.64□□□□□ -1.35
SF3A1-208ENST00000485618 SNAPC3Q92966 411 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms