RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 LSM2Q9Y333 95 aaKnown RBP8.2□□□□□ -1.1
HMGN1-215ENST00000485550 AK6Q9Y3D8 172 aaKnown RBP8.2□□□□□ -1.1
HMGN1-215ENST00000485550 A0A1W2PN81 502 aa8.19□□□□□ -1.1
HMGN1-215ENST00000485550 H7C2Y5 167 aa8.19□□□□□ -1.1
HMGN1-215ENST00000485550 RAB29O14966 203 aa8.19□□□□□ -1.1
HMGN1-215ENST00000485550 SLC22A1O15245 554 aa8.19□□□□□ -1.1
HMGN1-215ENST00000485550 SOX15O60248 233 aa8.19□□□□□ -1.1
HMGN1-215ENST00000485550 NDUFA3O95167 84 aa8.19□□□□□ -1.1
HMGN1-215ENST00000485550 NAPSAO96009 420 aa8.19□□□□□ -1.1
HMGN1-215ENST00000485550 SCTP09683 121 aa8.19□□□□□ -1.1
HMGN1-215ENST00000485550 UCHL1P09936 223 aa8.19□□□□□ -1.1
HMGN1-215ENST00000485550 CHRNA7P36544 502 aa8.19□□□□□ -1.1
HMGN1-215ENST00000485550 CLDN12P56749 244 aa8.19□□□□□ -1.1
HMGN1-215ENST00000485550 LINC00205P59089 165 aa8.19□□□□□ -1.1
HMGN1-215ENST00000485550 RPS25P62851 125 aaKnown RBP8.19□□□□□ -1.1
HMGN1-215ENST00000485550 QRFPP83859 136 aa8.19□□□□□ -1.1
HMGN1-215ENST00000485550 LY6G6FQ5SQ64 297 aa8.19□□□□□ -1.1
HMGN1-215ENST00000485550 RNLSQ5VYX0 342 aa8.19□□□□□ -1.1
HMGN1-215ENST00000485550 ZNF880Q6PDB4 577 aa8.19□□□□□ -1.1
HMGN1-215ENST00000485550 OVCH2Q7RTZ1 564 aa8.19□□□□□ -1.1
HMGN1-215ENST00000485550 MINDY2Q8NBR6 621 aa8.19□□□□□ -1.1
HMGN1-215ENST00000485550 OR6M1Q8NGM8 313 aa8.19□□□□□ -1.1
HMGN1-215ENST00000485550 DCUN1D4Q92564 292 aa8.19□□□□□ -1.1
HMGN1-215ENST00000485550 MS4A10Q96PG2 267 aa8.19□□□□□ -1.1
HMGN1-215ENST00000485550 GFI1Q99684 422 aa8.19□□□□□ -1.1
HMGN1-215ENST00000485550 CHCHD6Q9BRQ6 235 aa8.19□□□□□ -1.1
HMGN1-215ENST00000485550 FAM103A1Q9BTL3 118 aaKnown RBP8.19□□□□□ -1.1
HMGN1-215ENST00000485550 C11orf54Q9H0W9 315 aaPredicted RBP8.19□□□□□ -1.1
HMGN1-215ENST00000485550 VCXQ9H320 206 aa8.19□□□□□ -1.1
HMGN1-215ENST00000485550 PLGRKTQ9HBL7 147 aa8.19□□□□□ -1.1
HMGN1-215ENST00000485550 NKX1-2Q9UD57 310 aaPredicted RBP8.19□□□□□ -1.1
HMGN1-215ENST00000485550 ZNF580Q9UK33 172 aa8.19□□□□□ -1.1
HMGN1-215ENST00000485550 GAB2Q9UQC2 676 aa8.19□□□□□ -1.1
HMGN1-215ENST00000485550 ZNF256Q9Y2P7 627 aaPredicted RBP8.19□□□□□ -1.1
HMGN1-215ENST00000485550 SMAD5-AS1Q9Y6J3 95 aa8.19□□□□□ -1.1
HMGN1-215ENST00000485550 TNCP24821 2201 aa8.19□□□□□ -1.1
HMGN1-215ENST00000485550 H0YJW9 148 aa8.18□□□□□ -1.1
HMGN1-215ENST00000485550 RRHO14718 337 aa8.18□□□□□ -1.1
HMGN1-215ENST00000485550 HSPA12AO43301 675 aa8.18□□□□□ -1.1
HMGN1-215ENST00000485550 BPNT1O95861 308 aa8.18□□□□□ -1.1
HMGN1-215ENST00000485550 IGHV3-11P01762 117 aa8.18□□□□□ -1.1
HMGN1-215ENST00000485550 OR8U8P0C7N1 319 aa8.18□□□□□ -1.1
HMGN1-215ENST00000485550 EGR2P11161 476 aaPredicted RBP8.18□□□□□ -1.1
HMGN1-215ENST00000485550 ARSBP15848 533 aa8.18□□□□□ -1.1
HMGN1-215ENST00000485550 VEGFCP49767 419 aa8.18□□□□□ -1.1
HMGN1-215ENST00000485550 SLURP1P55000 103 aa8.18□□□□□ -1.1
HMGN1-215ENST00000485550 TMEM50BP56557 158 aa8.18□□□□□ -1.1
HMGN1-215ENST00000485550 TMEM91Q6ZNR0 172 aa8.18□□□□□ -1.1
HMGN1-215ENST00000485550 UFD1Q92890 307 aa8.18□□□□□ -1.1
HMGN1-215ENST00000485550 DLX4Q92988 240 aaPredicted RBP8.18□□□□□ -1.1
HMGN1-215ENST00000485550 ARHGAP5-AS1Q96IT6 56 aa8.18□□□□□ -1.1
HMGN1-215ENST00000485550 URM1Q9BTM9 101 aaKnown RBP8.18□□□□□ -1.1
HMGN1-215ENST00000485550 IGHV4OR15-8A0A075B7B6 117 aa8.17□□□□□ -1.1
HMGN1-215ENST00000485550 A0A087WW49 117 aa8.17□□□□□ -1.1
HMGN1-215ENST00000485550 LINC01619G3V211 115 aa8.17□□□□□ -1.1
HMGN1-215ENST00000485550 OVOL1O14753 267 aa8.17□□□□□ -1.1
HMGN1-215ENST00000485550 PROP1O75360 226 aa8.17□□□□□ -1.1
HMGN1-215ENST00000485550 SAP30O75446 220 aa8.17□□□□□ -1.1
HMGN1-215ENST00000485550 CD37P11049 281 aa8.17□□□□□ -1.1
HMGN1-215ENST00000485550 MC5RP33032 325 aa8.17□□□□□ -1.1
HMGN1-215ENST00000485550 AQP4P55087 323 aa8.17□□□□□ -1.1
HMGN1-215ENST00000485550 RPS16P62249 146 aaKnown RBP8.17□□□□□ -1.1
HMGN1-215ENST00000485550 HLA-DRB3P79483 266 aa8.17□□□□□ -1.1
HMGN1-215ENST00000485550 RUNX1Q01196 453 aa8.17□□□□□ -1.1
HMGN1-215ENST00000485550 PLA2G7Q13093 441 aa8.17□□□□□ -1.1
HMGN1-215ENST00000485550 IRF3Q14653 427 aa8.17□□□□□ -1.1
HMGN1-215ENST00000485550 PSG5Q15238 335 aa8.17□□□□□ -1.1
HMGN1-215ENST00000485550 RAB11BQ15907 218 aa8.17□□□□□ -1.1
HMGN1-215ENST00000485550 ZNF660Q6AZW8 331 aaPredicted RBP8.17□□□□□ -1.1
HMGN1-215ENST00000485550 FAM71F2Q6NXP2 309 aa8.17□□□□□ -1.1
HMGN1-215ENST00000485550 UNQ5815/PRO19632Q6UWF5 114 aa8.17□□□□□ -1.1
HMGN1-215ENST00000485550 MOB1BQ7L9L4 216 aa8.17□□□□□ -1.1
HMGN1-215ENST00000485550 PPP1R27Q86WC6 154 aa8.17□□□□□ -1.1
HMGN1-215ENST00000485550 CITED4Q96RK1 184 aa8.17□□□□□ -1.1
HMGN1-215ENST00000485550 AGMATQ9BSE5 352 aa8.17□□□□□ -1.1
HMGN1-215ENST00000485550 PECRQ9BY49 303 aa8.17□□□□□ -1.1
HMGN1-215ENST00000485550 CCDC90BQ9GZT6 254 aa8.17□□□□□ -1.1
HMGN1-215ENST00000485550 RIMS4Q9H426 269 aaPredicted RBP8.17□□□□□ -1.1
HMGN1-215ENST00000485550 Q9N2K0 584 aa8.17□□□□□ -1.1
HMGN1-215ENST00000485550 ISYNA1Q9NPH2 558 aa8.17□□□□□ -1.1
HMGN1-215ENST00000485550 METTL1Q9UBP6 276 aaKnown RBP8.17□□□□□ -1.1
HMGN1-215ENST00000485550 FOXA2Q9Y261 457 aaPredicted RBP8.17□□□□□ -1.1
HMGN1-215ENST00000485550 WASHC3Q9Y3C0 194 aa8.17□□□□□ -1.1
HMGN1-215ENST00000485550 TPRKBQ9Y3C4 175 aa8.17□□□□□ -1.1
HMGN1-215ENST00000485550 NUBP2Q9Y5Y2 271 aa8.17□□□□□ -1.1
HMGN1-215ENST00000485550 TRBV6-6A0A0A6YYG2 114 aa8.16□□□□□ -1.1
HMGN1-215ENST00000485550 IGKV1-6A0A0C4DH72 117 aa8.16□□□□□ -1.1
HMGN1-215ENST00000485550 OR5H14A6NHG9 310 aa8.16□□□□□ -1.1
HMGN1-215ENST00000485550 FOXI3A8MTJ6 420 aaPredicted RBP8.16□□□□□ -1.1
HMGN1-215ENST00000485550 SLC17A2O00624 439 aa8.16□□□□□ -1.1
HMGN1-215ENST00000485550 IGKV1-16P04430 117 aa8.16□□□□□ -1.1
HMGN1-215ENST00000485550 CD3GP09693 182 aa8.16□□□□□ -1.1
HMGN1-215ENST00000485550 CPEP16870 476 aa8.16□□□□□ -1.1
HMGN1-215ENST00000485550 ZBTB25P24278 435 aa8.16□□□□□ -1.1
HMGN1-215ENST00000485550 MAP2K4P45985 399 aa8.16□□□□□ -1.1
HMGN1-215ENST00000485550 INSL3P51460 131 aa8.16□□□□□ -1.1
HMGN1-215ENST00000485550 TMEM267Q0VDI3 215 aaPredicted RBP8.16□□□□□ -1.1
HMGN1-215ENST00000485550 C2orf76Q3KRA6 126 aa8.16□□□□□ -1.1
HMGN1-215ENST00000485550 ACTBL2Q562R1 376 aa8.16□□□□□ -1.1
HMGN1-215ENST00000485550 C19orf54Q5BKX5 351 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms