RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 CEACAM6P40199 344 aa14.82□□□□□ -0.04
COL27A1-205ENST00000485397 LINC00205P59089 165 aa14.82□□□□□ -0.04
COL27A1-205ENST00000485397 PSG5Q15238 335 aa14.82□□□□□ -0.04
COL27A1-205ENST00000485397 HSD17B12Q53GQ0 312 aa14.82□□□□□ -0.04
COL27A1-205ENST00000485397 ACTBL2Q562R1 376 aa14.82□□□□□ -0.04
COL27A1-205ENST00000485397 MOB1BQ7L9L4 216 aa14.82□□□□□ -0.04
COL27A1-205ENST00000485397 DRAXINQ8NBI3 349 aaPredicted RBP14.82□□□□□ -0.04
COL27A1-205ENST00000485397 LFNGQ8NES3 379 aa14.82□□□□□ -0.04
COL27A1-205ENST00000485397 MUC7Q8TAX7 377 aa14.82□□□□□ -0.04
COL27A1-205ENST00000485397 LPAR5Q9H1C0 372 aa14.82□□□□□ -0.04
COL27A1-205ENST00000485397 GHITMQ9H3K2 345 aa14.82□□□□□ -0.04
COL27A1-205ENST00000485397 METTL1Q9UBP6 276 aaKnown RBP14.82□□□□□ -0.04
COL27A1-205ENST00000485397 RNF150Q9ULK6 438 aa14.82□□□□□ -0.04
COL27A1-205ENST00000485397 TRBV6-6A0A0A6YYG2 114 aa14.81□□□□□ -0.04
COL27A1-205ENST00000485397 RBBP9O75884 186 aa14.81□□□□□ -0.04
COL27A1-205ENST00000485397 BPNT1O95861 308 aa14.81□□□□□ -0.04
COL27A1-205ENST00000485397 HSPB1P04792 205 aaKnown RBP14.81□□□□□ -0.04
COL27A1-205ENST00000485397 TPPP2P59282 170 aa14.81□□□□□ -0.04
COL27A1-205ENST00000485397 HLA-DRB3P79483 266 aa14.81□□□□□ -0.04
COL27A1-205ENST00000485397 P2RY14Q15391 338 aa14.81□□□□□ -0.04
COL27A1-205ENST00000485397 HAPLN4Q86UW8 402 aa14.81□□□□□ -0.04
COL27A1-205ENST00000485397 OR6Q1Q8NGQ2 317 aa14.81□□□□□ -0.04
COL27A1-205ENST00000485397 RHOVQ96L33 236 aa14.81□□□□□ -0.04
COL27A1-205ENST00000485397 MND1Q9BWT6 205 aa14.81□□□□□ -0.04
COL27A1-205ENST00000485397 RIMS4Q9H426 269 aaPredicted RBP14.81□□□□□ -0.04
COL27A1-205ENST00000485397 LSM2Q9Y333 95 aaKnown RBP14.81□□□□□ -0.04
COL27A1-205ENST00000485397 PTGES3LE9PB15 166 aa14.8□□□□□ -0.04
COL27A1-205ENST00000485397 CA2P00918 260 aa14.8□□□□□ -0.04
COL27A1-205ENST00000485397 SCTP09683 121 aa14.8□□□□□ -0.04
COL27A1-205ENST00000485397 OR8U9P0C7N5 309 aa14.8□□□□□ -0.04
COL27A1-205ENST00000485397 PITPNAQ00169 270 aa14.8□□□□□ -0.04
COL27A1-205ENST00000485397 AKIRIN2Q53H80 203 aa14.8□□□□□ -0.04
COL27A1-205ENST00000485397 CASC10Q5T4H9 136 aa14.8□□□□□ -0.04
COL27A1-205ENST00000485397 OGFRL1Q5TC84 451 aaPredicted RBP14.8□□□□□ -0.04
COL27A1-205ENST00000485397 RNLSQ5VYX0 342 aa14.8□□□□□ -0.04
COL27A1-205ENST00000485397 PYHIN1Q6K0P9 492 aa14.8□□□□□ -0.04
COL27A1-205ENST00000485397 ZNF562Q6V9R5 426 aa14.8□□□□□ -0.04
COL27A1-205ENST00000485397 OR6M1Q8NGM8 313 aa14.8□□□□□ -0.04
COL27A1-205ENST00000485397 FLYWCH2Q96CP2 140 aaKnown RBP14.8□□□□□ -0.04
COL27A1-205ENST00000485397 GFI1Q99684 422 aa14.8□□□□□ -0.04
COL27A1-205ENST00000485397 RNF5Q99942 180 aa14.8□□□□□ -0.04
COL27A1-205ENST00000485397 HSPA12AO43301 675 aa14.79□□□□□ -0.04
COL27A1-205ENST00000485397 IGKV1-16P04430 117 aa14.79□□□□□ -0.04
COL27A1-205ENST00000485397 UCHL1P09936 223 aa14.79□□□□□ -0.04
COL27A1-205ENST00000485397 CPEP16870 476 aa14.79□□□□□ -0.04
COL27A1-205ENST00000485397 ZBTB25P24278 435 aa14.79□□□□□ -0.04
COL27A1-205ENST00000485397 RPS16P62249 146 aaKnown RBP14.79□□□□□ -0.04
COL27A1-205ENST00000485397 SPHARQ15513 63 aa14.79□□□□□ -0.04
COL27A1-205ENST00000485397 SRSF7Q16629 238 aaKnown RBP eCLIP14.79□□□□□ -0.04
COL27A1-205ENST00000485397 FAM89BQ8N5H3 189 aa14.79□□□□□ -0.04
COL27A1-205ENST00000485397 ZNF383Q8NA42 475 aa14.79□□□□□ -0.04
COL27A1-205ENST00000485397 EDARADDQ8WWZ3 215 aa14.79□□□□□ -0.04
COL27A1-205ENST00000485397 OR4C12Q96R67 309 aa14.79□□□□□ -0.04
COL27A1-205ENST00000485397 URM1Q9BTM9 101 aaKnown RBP14.79□□□□□ -0.04
COL27A1-205ENST00000485397 Q9N2K0 584 aa14.79□□□□□ -0.04
COL27A1-205ENST00000485397 FOXI3A8MTJ6 420 aaPredicted RBP14.78□□□□□ -0.04
COL27A1-205ENST00000485397 TRGV3P03979 118 aa14.78□□□□□ -0.04
COL27A1-205ENST00000485397 TMEM50BP56557 158 aa14.78□□□□□ -0.04
COL27A1-205ENST00000485397 MED22Q15528 200 aa14.78□□□□□ -0.04
COL27A1-205ENST00000485397 TMEM203Q969S6 136 aa14.78□□□□□ -0.04
COL27A1-205ENST00000485397 PTX4Q96A99 478 aa14.78□□□□□ -0.04
COL27A1-205ENST00000485397 AK6Q9Y3D8 172 aaKnown RBP14.78□□□□□ -0.04
COL27A1-205ENST00000485397 DNAH7Q8WXX0 4024 aa14.77□□□□□ -0.04
COL27A1-205ENST00000485397 IGKV1-6A0A0C4DH72 117 aa14.77□□□□□ -0.05
COL27A1-205ENST00000485397 CASQ2O14958 399 aaPredicted RBP14.77□□□□□ -0.05
COL27A1-205ENST00000485397 ARPC1BO15143 372 aaKnown RBP14.77□□□□□ -0.05
COL27A1-205ENST00000485397 ARSBP15848 533 aa14.77□□□□□ -0.05
COL27A1-205ENST00000485397 CD40LGP29965 261 aa14.77□□□□□ -0.05
COL27A1-205ENST00000485397 FXYD3Q14802 87 aa14.77□□□□□ -0.05
COL27A1-205ENST00000485397 LIPKQ5VXJ0 399 aa14.77□□□□□ -0.05
COL27A1-205ENST00000485397 TMEM91Q6ZNR0 172 aa14.77□□□□□ -0.05
COL27A1-205ENST00000485397 GRPEL2Q8TAA5 225 aa14.77□□□□□ -0.05
COL27A1-205ENST00000485397 ARHGAP5-AS1Q96IT6 56 aa14.77□□□□□ -0.05
COL27A1-205ENST00000485397 TSNAXQ99598 290 aaKnown RBP14.77□□□□□ -0.05
COL27A1-205ENST00000485397 SLA2Q9H6Q3 261 aa14.77□□□□□ -0.05
COL27A1-205ENST00000485397 PLGRKTQ9HBL7 147 aa14.77□□□□□ -0.05
COL27A1-205ENST00000485397 ZNF221Q9UK13 617 aa14.77□□□□□ -0.05
COL27A1-205ENST00000485397 HSF4Q9ULV5 492 aa14.77□□□□□ -0.05
COL27A1-205ENST00000485397 MGAT4AQ9UM21 535 aa14.77□□□□□ -0.05
COL27A1-205ENST00000485397 SLC17A2O00624 439 aa14.76□□□□□ -0.05
COL27A1-205ENST00000485397 SLC25A17O43808 307 aa14.76□□□□□ -0.05
COL27A1-205ENST00000485397 TFAP2AP05549 437 aa14.76□□□□□ -0.05
COL27A1-205ENST00000485397 VEGFCP49767 419 aa14.76□□□□□ -0.05
COL27A1-205ENST00000485397 OR5T1Q8NG75 326 aa14.76□□□□□ -0.05
COL27A1-205ENST00000485397 UFD1Q92890 307 aa14.76□□□□□ -0.05
COL27A1-205ENST00000485397 CMSS1Q9BQ75 279 aaKnown RBP14.76□□□□□ -0.05
COL27A1-205ENST00000485397 PECRQ9BY49 303 aa14.76□□□□□ -0.05
COL27A1-205ENST00000485397 ZMAT4Q9H898 229 aa14.76□□□□□ -0.05
COL27A1-205ENST00000485397 C12orf4Q9NQ89 552 aa14.76□□□□□ -0.05
COL27A1-205ENST00000485397 ZNF355PQ9NSJ1 428 aa14.76□□□□□ -0.05
COL27A1-205ENST00000485397 RDH8Q9NYR8 311 aa14.76□□□□□ -0.05
COL27A1-205ENST00000485397 SPDEFO95238 335 aa14.75□□□□□ -0.05
COL27A1-205ENST00000485397 CLDN12P56749 244 aa14.75□□□□□ -0.05
COL27A1-205ENST00000485397 RPS25P62851 125 aaKnown RBP14.75□□□□□ -0.05
COL27A1-205ENST00000485397 SSBP2P81877 361 aaPredicted RBP14.75□□□□□ -0.05
COL27A1-205ENST00000485397 IRF3Q14653 427 aa14.75□□□□□ -0.05
COL27A1-205ENST00000485397 PDPNQ86YL7 162 aa14.75□□□□□ -0.05
COL27A1-205ENST00000485397 Q8N1Y9 231 aa14.75□□□□□ -0.05
COL27A1-205ENST00000485397 POC5Q8NA72 575 aa14.75□□□□□ -0.05
COL27A1-205ENST00000485397 RSRP1Q9BUV0 290 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms