RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 ABHD14BQ96IU4 210 aa8.86□□□□□ -0.99
SCFD1-206ENST00000484733 RHOVQ96L33 236 aa8.86□□□□□ -0.99
SCFD1-206ENST00000484733 OR5B12Q96R08 314 aa8.86□□□□□ -0.99
SCFD1-206ENST00000484733 GFI1Q99684 422 aa8.86□□□□□ -0.99
SCFD1-206ENST00000484733 PARP12Q9H0J9 701 aaKnown RBP8.86□□□□□ -0.99
SCFD1-206ENST00000484733 KCNK15Q9H427 330 aa8.86□□□□□ -0.99
SCFD1-206ENST00000484733 HSPB1P04792 205 aaKnown RBP8.85□□□□□ -0.99
SCFD1-206ENST00000484733 GSTP1P09211 210 aaKnown RBP8.85□□□□□ -0.99
SCFD1-206ENST00000484733 TMEM50BP56557 158 aa8.85□□□□□ -0.99
SCFD1-206ENST00000484733 TMEM91Q6ZNR0 172 aa8.85□□□□□ -0.99
SCFD1-206ENST00000484733 FLYWCH2Q96CP2 140 aaKnown RBP8.85□□□□□ -0.99
SCFD1-206ENST00000484733 TSNAXQ99598 290 aaKnown RBP8.85□□□□□ -0.99
SCFD1-206ENST00000484733 GAB2Q9UQC2 676 aa8.85□□□□□ -0.99
SCFD1-206ENST00000484733 PTGES3LE9PB15 166 aa8.85□□□□□ -0.99
SCFD1-206ENST00000484733 PROP1O75360 226 aa8.85□□□□□ -0.99
SCFD1-206ENST00000484733 LY86O95711 162 aa8.85□□□□□ -0.99
SCFD1-206ENST00000484733 ARSBP15848 533 aa8.85□□□□□ -0.99
SCFD1-206ENST00000484733 PSMA1P25786 263 aaKnown RBP8.85□□□□□ -0.99
SCFD1-206ENST00000484733 PLGLAQ15195 96 aa8.85□□□□□ -0.99
SCFD1-206ENST00000484733 MED22Q15528 200 aa8.85□□□□□ -0.99
SCFD1-206ENST00000484733 GLDNQ6ZMI3 551 aaPredicted RBP8.85□□□□□ -0.99
SCFD1-206ENST00000484733 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.85□□□□□ -0.99
SCFD1-206ENST00000484733 OR6Q1Q8NGQ2 317 aa8.85□□□□□ -0.99
SCFD1-206ENST00000484733 ASCL2Q99929 193 aa8.85□□□□□ -0.99
SCFD1-206ENST00000484733 ALX4Q9H161 411 aaPredicted RBP8.85□□□□□ -0.99
SCFD1-206ENST00000484733 SLA2Q9H6Q3 261 aa8.85□□□□□ -0.99
SCFD1-206ENST00000484733 OR1A1Q9P1Q5 309 aa8.85□□□□□ -0.99
SCFD1-206ENST00000484733 IGHV4OR15-8A0A075B7B6 117 aa8.84□□□□□ -0.99
SCFD1-206ENST00000484733 A0A087WW49 117 aa8.84□□□□□ -0.99
SCFD1-206ENST00000484733 H7C2Y5 167 aa8.84□□□□□ -0.99
SCFD1-206ENST00000484733 ARL6IP5O75915 188 aa8.84□□□□□ -0.99
SCFD1-206ENST00000484733 SLURP1P55000 103 aa8.84□□□□□ -0.99
SCFD1-206ENST00000484733 PDPNQ86YL7 162 aa8.84□□□□□ -0.99
SCFD1-206ENST00000484733 HDHD3Q9BSH5 251 aaPredicted RBP8.84□□□□□ -0.99
SCFD1-206ENST00000484733 PECRQ9BY49 303 aa8.84□□□□□ -0.99
SCFD1-206ENST00000484733 DUSP21Q9H596 190 aa8.84□□□□□ -0.99
SCFD1-206ENST00000484733 C12orf4Q9NQ89 552 aa8.84□□□□□ -0.99
SCFD1-206ENST00000484733 METTL1Q9UBP6 276 aaKnown RBP8.84□□□□□ -0.99
SCFD1-206ENST00000484733 TPRKBQ9Y3C4 175 aa8.84□□□□□ -0.99
SCFD1-206ENST00000484733 HUWE1Q7Z6Z7 4374 aaKnown RBP8.84□□□□□ -0.99
SCFD1-206ENST00000484733 H3BUA1 57 aa8.83□□□□□ -1
SCFD1-206ENST00000484733 SAP30O75446 220 aa8.83□□□□□ -1
SCFD1-206ENST00000484733 SCTP09683 121 aa8.83□□□□□ -1
SCFD1-206ENST00000484733 OR8U9P0C7N5 309 aa8.83□□□□□ -1
SCFD1-206ENST00000484733 P2RY14Q15391 338 aa8.83□□□□□ -1
SCFD1-206ENST00000484733 RAB11BQ15907 218 aa8.83□□□□□ -1
SCFD1-206ENST00000484733 ACTBL2Q562R1 376 aa8.83□□□□□ -1
SCFD1-206ENST00000484733 LIPKQ5VXJ0 399 aa8.83□□□□□ -1
SCFD1-206ENST00000484733 UNQ5815/PRO19632Q6UWF5 114 aa8.83□□□□□ -1
SCFD1-206ENST00000484733 PLGRKTQ9HBL7 147 aa8.83□□□□□ -1
SCFD1-206ENST00000484733 ZNF221Q9UK13 617 aa8.83□□□□□ -1
SCFD1-206ENST00000484733 TRDCB7Z8K6 153 aa8.83□□□□□ -1
SCFD1-206ENST00000484733 LDLRAD4O15165 306 aa8.83□□□□□ -1
SCFD1-206ENST00000484733 HSPA12AO43301 675 aa8.83□□□□□ -1
SCFD1-206ENST00000484733 BRI3O95415 125 aa8.83□□□□□ -1
SCFD1-206ENST00000484733 GP9P14770 177 aa8.83□□□□□ -1
SCFD1-206ENST00000484733 SPNP16150 400 aa8.83□□□□□ -1
SCFD1-206ENST00000484733 CPEP16870 476 aa8.83□□□□□ -1
SCFD1-206ENST00000484733 CD40LGP29965 261 aa8.83□□□□□ -1
SCFD1-206ENST00000484733 SERPINB10P48595 397 aa8.83□□□□□ -1
SCFD1-206ENST00000484733 MLLT11Q13015 90 aaPredicted RBP8.83□□□□□ -1
SCFD1-206ENST00000484733 ZNF383Q8NA42 475 aa8.83□□□□□ -1
SCFD1-206ENST00000484733 OR56B1Q8NGI3 324 aa8.83□□□□□ -1
SCFD1-206ENST00000484733 CMSS1Q9BQ75 279 aaKnown RBP8.83□□□□□ -1
SCFD1-206ENST00000484733 IGKV1-6A0A0C4DH72 117 aa8.82□□□□□ -1
SCFD1-206ENST00000484733 ERICH4A6NGS2 130 aa8.82□□□□□ -1
SCFD1-206ENST00000484733 DIRAS3O95661 229 aa8.82□□□□□ -1
SCFD1-206ENST00000484733 CA2P00918 260 aa8.82□□□□□ -1
SCFD1-206ENST00000484733 APOA2P02652 100 aa8.82□□□□□ -1
SCFD1-206ENST00000484733 TFAP2AP05549 437 aa8.82□□□□□ -1
SCFD1-206ENST00000484733 PSMD7P51665 324 aa8.82□□□□□ -1
SCFD1-206ENST00000484733 RPS16P62249 146 aaKnown RBP8.82□□□□□ -1
SCFD1-206ENST00000484733 RPS25P62851 125 aaKnown RBP8.82□□□□□ -1
SCFD1-206ENST00000484733 OR4A4PQ8NGN8 299 aa8.82□□□□□ -1
SCFD1-206ENST00000484733 ABHD5Q8WTS1 349 aa8.82□□□□□ -1
SCFD1-206ENST00000484733 ARHGAP5-AS1Q96IT6 56 aa8.82□□□□□ -1
SCFD1-206ENST00000484733 TMEM68Q96MH6 324 aa8.82□□□□□ -1
SCFD1-206ENST00000484733 AK6Q9Y3D8 172 aaKnown RBP8.82□□□□□ -1
SCFD1-206ENST00000484733 RYR3Q15413 4870 aa8.82□□□□□ -1
SCFD1-206ENST00000484733 CRYGBP07316 175 aa8.82□□□□□ -1
SCFD1-206ENST00000484733 LGALS7P47929 136 aa8.82□□□□□ -1
SCFD1-206ENST00000484733 VEGFCP49767 419 aa8.82□□□□□ -1
SCFD1-206ENST00000484733 PITPNAQ00169 270 aa8.82□□□□□ -1
SCFD1-206ENST00000484733 TAGLNQ01995 201 aaKnown RBP8.82□□□□□ -1
SCFD1-206ENST00000484733 C2orf76Q3KRA6 126 aa8.82□□□□□ -1
SCFD1-206ENST00000484733 MOGAT2Q3SYC2 334 aa8.82□□□□□ -1
SCFD1-206ENST00000484733 SBSPONQ8IVN8 264 aa8.82□□□□□ -1
SCFD1-206ENST00000484733 LFNGQ8NES3 379 aa8.82□□□□□ -1
SCFD1-206ENST00000484733 ARPC1AQ92747 370 aa8.82□□□□□ -1
SCFD1-206ENST00000484733 TMEM203Q969S6 136 aa8.82□□□□□ -1
SCFD1-206ENST00000484733 FAM3DQ96BQ1 224 aa8.82□□□□□ -1
SCFD1-206ENST00000484733 CLCC1Q96S66 551 aa8.82□□□□□ -1
SCFD1-206ENST00000484733 RAB22AQ9UL26 194 aa8.82□□□□□ -1
SCFD1-206ENST00000484733 A3GALT2U3KPV4 340 aa8.82□□□□□ -1
SCFD1-206ENST00000484733 RGS10O43665 173 aa8.81□□□□□ -1
SCFD1-206ENST00000484733 TPPP2P59282 170 aa8.81□□□□□ -1
SCFD1-206ENST00000484733 FXYD3Q14802 87 aa8.81□□□□□ -1
SCFD1-206ENST00000484733 PLAC9Q5JTB6 97 aa8.81□□□□□ -1
SCFD1-206ENST00000484733 OR4C12Q96R67 309 aa8.81□□□□□ -1
SCFD1-206ENST00000484733 FAM103A1Q9BTL3 118 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms