RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 ANKRD34BA5PLL1 514 aa10.67□□□□□ -0.7
VARS-226ENST00000483275 H0YJW9 148 aa10.67□□□□□ -0.7
VARS-226ENST00000483275 RGS11O94810 467 aa10.67□□□□□ -0.7
VARS-226ENST00000483275 CA2P00918 260 aa10.67□□□□□ -0.7
VARS-226ENST00000483275 CD1AP06126 327 aa10.67□□□□□ -0.7
VARS-226ENST00000483275 MAPK3P27361 379 aaPredicted RBP10.67□□□□□ -0.7
VARS-226ENST00000483275 HTR2CP28335 458 aa10.67□□□□□ -0.7
VARS-226ENST00000483275 RBM48Q5RL73 367 aaKnown RBP10.67□□□□□ -0.7
VARS-226ENST00000483275 Q8N1Y9 231 aa10.67□□□□□ -0.7
VARS-226ENST00000483275 SVOPQ8N4V2 548 aa10.67□□□□□ -0.7
VARS-226ENST00000483275 OR4C12Q96R67 309 aa10.67□□□□□ -0.7
VARS-226ENST00000483275 GHITMQ9H3K2 345 aa10.67□□□□□ -0.7
VARS-226ENST00000483275 METTL1Q9UBP6 276 aaKnown RBP10.67□□□□□ -0.7
VARS-226ENST00000483275 ADAM30Q9UKF2 790 aa10.67□□□□□ -0.7
VARS-226ENST00000483275 NUBP2Q9Y5Y2 271 aa10.67□□□□□ -0.7
VARS-226ENST00000483275 BIRC6Q9NR09 4857 aa10.67□□□□□ -0.7
VARS-226ENST00000483275 TRGV3P03979 118 aa10.66□□□□□ -0.7
VARS-226ENST00000483275 HSPB1P04792 205 aaKnown RBP10.66□□□□□ -0.7
VARS-226ENST00000483275 GSTP1P09211 210 aaKnown RBP10.66□□□□□ -0.7
VARS-226ENST00000483275 SPHARQ15513 63 aa10.66□□□□□ -0.7
VARS-226ENST00000483275 ZNF660Q6AZW8 331 aaPredicted RBP10.66□□□□□ -0.7
VARS-226ENST00000483275 NEDD4LQ96PU5 975 aa10.66□□□□□ -0.7
VARS-226ENST00000483275 EDA2RQ9HAV5 297 aa10.66□□□□□ -0.7
VARS-226ENST00000483275 RETNQ9HD89 108 aa10.66□□□□□ -0.7
VARS-226ENST00000483275 ABRACLQ9P1F3 81 aa10.66□□□□□ -0.7
VARS-226ENST00000483275 STEAP1Q9UHE8 339 aa10.66□□□□□ -0.7
VARS-226ENST00000483275 SLC23A1Q9UHI7 598 aa10.66□□□□□ -0.7
VARS-226ENST00000483275 RNF150Q9ULK6 438 aa10.66□□□□□ -0.7
VARS-226ENST00000483275 WASHC3Q9Y3C0 194 aa10.66□□□□□ -0.7
VARS-226ENST00000483275 ALMS1Q8TCU4 4167 aa10.65□□□□□ -0.7
VARS-226ENST00000483275 A0A0A6YYD4 124 aa10.65□□□□□ -0.7
VARS-226ENST00000483275 IGKV1-16P04430 117 aa10.65□□□□□ -0.7
VARS-226ENST00000483275 GLAP06280 429 aa10.65□□□□□ -0.7
VARS-226ENST00000483275 ARSBP15848 533 aa10.65□□□□□ -0.7
VARS-226ENST00000483275 CRHBPP24387 322 aa10.65□□□□□ -0.7
VARS-226ENST00000483275 UNC119Q13432 240 aa10.65□□□□□ -0.7
VARS-226ENST00000483275 PSG5Q15238 335 aa10.65□□□□□ -0.7
VARS-226ENST00000483275 ZNF554Q86TJ5 538 aa10.65□□□□□ -0.7
VARS-226ENST00000483275 MS4A15Q8N5U1 240 aa10.65□□□□□ -0.7
VARS-226ENST00000483275 NKAIN3Q8N8D7 197 aa10.65□□□□□ -0.7
VARS-226ENST00000483275 UFD1Q92890 307 aa10.65□□□□□ -0.7
VARS-226ENST00000483275 ISOC1Q96CN7 298 aa10.65□□□□□ -0.7
VARS-226ENST00000483275 TMEM59Q9BXS4 323 aa10.65□□□□□ -0.7
VARS-226ENST00000483275 DUSP21Q9H596 190 aa10.65□□□□□ -0.7
VARS-226ENST00000483275 ZNF355PQ9NSJ1 428 aa10.65□□□□□ -0.7
VARS-226ENST00000483275 STUB1Q9UNE7 303 aa10.65□□□□□ -0.7
VARS-226ENST00000483275 OR5H14A6NHG9 310 aa10.64□□□□□ -0.71
VARS-226ENST00000483275 RAB29O14966 203 aa10.64□□□□□ -0.71
VARS-226ENST00000483275 ARPC1BO15143 372 aaKnown RBP10.64□□□□□ -0.71
VARS-226ENST00000483275 LDLRAD4O15165 306 aa10.64□□□□□ -0.71
VARS-226ENST00000483275 SLC25A17O43808 307 aa10.64□□□□□ -0.71
VARS-226ENST00000483275 NAPSAO96009 420 aa10.64□□□□□ -0.71
VARS-226ENST00000483275 IGLV1-51P01701 117 aa10.64□□□□□ -0.71
VARS-226ENST00000483275 HSMCR30P0CW71 290 aa10.64□□□□□ -0.71
VARS-226ENST00000483275 RPS27AP62979 156 aaKnown RBP10.64□□□□□ -0.71
VARS-226ENST00000483275 PJVKQ0ZLH3 352 aa10.64□□□□□ -0.71
VARS-226ENST00000483275 LY6G6FQ5SQ64 297 aa10.64□□□□□ -0.71
VARS-226ENST00000483275 FAM71F2Q6NXP2 309 aa10.64□□□□□ -0.71
VARS-226ENST00000483275 CD200R1LQ6Q8B3 271 aa10.64□□□□□ -0.71
VARS-226ENST00000483275 PRSS48Q7RTY5 328 aa10.64□□□□□ -0.71
VARS-226ENST00000483275 LRRTM1Q86UE6 522 aa10.64□□□□□ -0.71
VARS-226ENST00000483275 ANKRD13BQ86YJ7 626 aa10.64□□□□□ -0.71
VARS-226ENST00000483275 TCTEX1D1Q8N7M0 179 aa10.64□□□□□ -0.71
VARS-226ENST00000483275 OR5T1Q8NG75 326 aa10.64□□□□□ -0.71
VARS-226ENST00000483275 FLYWCH2Q96CP2 140 aaKnown RBP10.64□□□□□ -0.71
VARS-226ENST00000483275 RHOVQ96L33 236 aa10.64□□□□□ -0.71
VARS-226ENST00000483275 UQCC2Q9BRT2 126 aa10.64□□□□□ -0.71
VARS-226ENST00000483275 TMED9Q9BVK6 235 aa10.64□□□□□ -0.71
VARS-226ENST00000483275 C11orf54Q9H0W9 315 aaPredicted RBP10.64□□□□□ -0.71
VARS-226ENST00000483275 PIPOXQ9P0Z9 390 aa10.64□□□□□ -0.71
VARS-226ENST00000483275 AK3Q9UIJ7 227 aa10.64□□□□□ -0.71
VARS-226ENST00000483275 HSPA12AO43301 675 aa10.63□□□□□ -0.71
VARS-226ENST00000483275 PROP1O75360 226 aa10.63□□□□□ -0.71
VARS-226ENST00000483275 TRBV12-3P01733 135 aa10.63□□□□□ -0.71
VARS-226ENST00000483275 APELAP0DMC3 54 aa10.63□□□□□ -0.71
VARS-226ENST00000483275 CPEP16870 476 aa10.63□□□□□ -0.71
VARS-226ENST00000483275 SSBP2P81877 361 aaPredicted RBP10.63□□□□□ -0.71
VARS-226ENST00000483275 TMEM267Q0VDI3 215 aaPredicted RBP10.63□□□□□ -0.71
VARS-226ENST00000483275 IRF3Q14653 427 aa10.63□□□□□ -0.71
VARS-226ENST00000483275 P2RY14Q15391 338 aa10.63□□□□□ -0.71
VARS-226ENST00000483275 PYHIN1Q6K0P9 492 aa10.63□□□□□ -0.71
VARS-226ENST00000483275 ZNF880Q6PDB4 577 aa10.63□□□□□ -0.71
VARS-226ENST00000483275 SGPP2Q8IWX5 399 aa10.63□□□□□ -0.71
VARS-226ENST00000483275 CDH26Q8IXH8 852 aa10.63□□□□□ -0.71
VARS-226ENST00000483275 ZNF383Q8NA42 475 aa10.63□□□□□ -0.71
VARS-226ENST00000483275 OR5AN1Q8NGI8 311 aa10.63□□□□□ -0.71
VARS-226ENST00000483275 AGMATQ9BSE5 352 aa10.63□□□□□ -0.71
VARS-226ENST00000483275 C19orf73Q9NVV2 129 aa10.63□□□□□ -0.71
VARS-226ENST00000483275 SOCS1O15524 211 aa10.62□□□□□ -0.71
VARS-226ENST00000483275 TFAP2AP05549 437 aa10.62□□□□□ -0.71
VARS-226ENST00000483275 SYNJ2BPP57105 145 aa10.62□□□□□ -0.71
VARS-226ENST00000483275 RPS16P62249 146 aaKnown RBP10.62□□□□□ -0.71
VARS-226ENST00000483275 HLA-DRB3P79483 266 aa10.62□□□□□ -0.71
VARS-226ENST00000483275 FXYD3Q14802 87 aa10.62□□□□□ -0.71
VARS-226ENST00000483275 TRAM1Q15629 374 aa10.62□□□□□ -0.71
VARS-226ENST00000483275 HAGHQ16775 308 aa10.62□□□□□ -0.71
VARS-226ENST00000483275 ACSM3Q53FZ2 586 aa10.62□□□□□ -0.71
VARS-226ENST00000483275 AKIRIN2Q53H80 203 aa10.62□□□□□ -0.71
VARS-226ENST00000483275 FAM110AQ9BQ89 295 aa10.62□□□□□ -0.71
VARS-226ENST00000483275 ELOVL1Q9BW60 279 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms