RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 ALKAL1Q6UXT8 129 aa1.84□□□□□ -2.11
LAPTM4A-202ENST00000483117 IL34Q6ZMJ4 242 aa1.84□□□□□ -2.11
LAPTM4A-202ENST00000483117 PRNTQ86SH4 94 aa1.84□□□□□ -2.11
LAPTM4A-202ENST00000483117 ZNF429Q86V71 674 aa1.84□□□□□ -2.11
LAPTM4A-202ENST00000483117 PDPNQ86YL7 162 aa1.84□□□□□ -2.11
LAPTM4A-202ENST00000483117 ZDHHC22Q8N966 263 aa1.84□□□□□ -2.11
LAPTM4A-202ENST00000483117 GDPD1Q8N9F7 314 aa1.84□□□□□ -2.11
LAPTM4A-202ENST00000483117 OR2M3Q8NG83 312 aa1.84□□□□□ -2.11
LAPTM4A-202ENST00000483117 OR11H6Q8NGC7 330 aa1.84□□□□□ -2.11
LAPTM4A-202ENST00000483117 OR10J5Q8NHC4 309 aa1.84□□□□□ -2.11
LAPTM4A-202ENST00000483117 LHFPL5Q8TAF8 219 aa1.84□□□□□ -2.11
LAPTM4A-202ENST00000483117 CT55Q8WUE5 264 aa1.84□□□□□ -2.11
LAPTM4A-202ENST00000483117 MAFIPQ8WZ33 124 aa1.84□□□□□ -2.11
LAPTM4A-202ENST00000483117 BORCS5Q969J3 196 aa1.84□□□□□ -2.11
LAPTM4A-202ENST00000483117 APOBEC3DQ96AK3 386 aaPredicted RBP1.84□□□□□ -2.11
LAPTM4A-202ENST00000483117 ROPN1LQ96C74 230 aa1.84□□□□□ -2.11
LAPTM4A-202ENST00000483117 FXYD5Q96DB9 178 aa1.84□□□□□ -2.11
LAPTM4A-202ENST00000483117 RMI2Q96E14 147 aa1.84□□□□□ -2.11
LAPTM4A-202ENST00000483117 ABHD14BQ96IU4 210 aa1.84□□□□□ -2.11
LAPTM4A-202ENST00000483117 C18orf15Q96N68 181 aa1.84□□□□□ -2.11
LAPTM4A-202ENST00000483117 SCRT1Q9BWW7 348 aa1.84□□□□□ -2.11
LAPTM4A-202ENST00000483117 COMMD5Q9GZQ3 224 aa1.84□□□□□ -2.11
LAPTM4A-202ENST00000483117 FGF23Q9GZV9 251 aaPredicted RBP1.84□□□□□ -2.11
LAPTM4A-202ENST00000483117 MED28Q9H204 178 aa1.84□□□□□ -2.11
LAPTM4A-202ENST00000483117 SH3BGRL3Q9H299 93 aa1.84□□□□□ -2.11
LAPTM4A-202ENST00000483117 OR52D1Q9H346 318 aa1.84□□□□□ -2.11
LAPTM4A-202ENST00000483117 NANOGQ9H9S0 305 aa1.84□□□□□ -2.11
LAPTM4A-202ENST00000483117 PARVBQ9HBI1 364 aa1.84□□□□□ -2.11
LAPTM4A-202ENST00000483117 CYTL1Q9NRR1 136 aa1.84□□□□□ -2.11
LAPTM4A-202ENST00000483117 DHCR7Q9UBM7 475 aaKnown RBP1.84□□□□□ -2.11
LAPTM4A-202ENST00000483117 AK3Q9UIJ7 227 aa1.84□□□□□ -2.11
LAPTM4A-202ENST00000483117 GINS2Q9Y248 185 aa1.84□□□□□ -2.11
LAPTM4A-202ENST00000483117 TMEM14AQ9Y6G1 99 aa1.84□□□□□ -2.11
LAPTM4A-202ENST00000483117 DNMT1P26358 1616 aaKnown RBP1.84□□□□□ -2.12
LAPTM4A-202ENST00000483117 VWA8A3KMH1 1905 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 NUP160Q12769 1436 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 ARAP3Q8WWN8 1544 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 LOC102724200A0A096LPH7 203 aaPredicted RBP1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 IGHV3-49A0A0A0MS15 119 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 A0A1B0GW54 56 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 PRORSD1PA6NEY8 169 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 KNCNA6PVL3 124 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 E7EQ34 232 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 SLC17A3O00476 420 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 KPNA4O00629 521 aaPredicted RBP1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 DEDDO75618 318 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 APOMO95445 188 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 CCNE2O96020 404 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 IGLV3-27P01718 113 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 HLA-DQA1P01909 254 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 HLA-DRB1P01911 266 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 SERPINA7P05543 415 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 SPI1P17947 270 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 IL1RNP18510 177 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 CRABP1P29762 137 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 GABRA3P34903 492 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 MAP2K4P45985 399 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 SRP9P49458 86 aaKnown RBP1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 CDC42P60953 191 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 SNRPD2P62316 118 aaKnown RBP1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 RHOBP62745 196 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 FLI1Q01543 452 aaPredicted RBP1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 IL15RAQ13261 267 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 APOFQ13790 326 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 MESTQ5EB52 335 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 C1orf194Q5T5A4 169 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 MRPL2Q5T653 305 aaKnown RBP1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 NANOGP8Q6NSW7 305 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 GOLT1AQ6ZVE7 132 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 ATP5L2Q7Z4Y8 100 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 FAM19A3Q7Z5A8 133 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 ZNF567Q8N184 647 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 TMEM256Q8N2U0 113 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 SMIM20Q8N5G0 67 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 TMEM75Q8N9X5 138 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 OR10K1Q8NGX5 313 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 ZNRF2Q8NHG8 242 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 ZNF721Q8TF20 911 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 RTN4IP1Q8WWV3 396 aaPredicted RBP1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 C11orf40Q8WZ69 217 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 GPR146Q96CH1 333 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 TCEAL4Q96EI5 215 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 SLC25A44Q96H78 314 aaPredicted RBP1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 TBX5Q99593 518 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 CDX2Q99626 313 aaPredicted RBP1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 HDHD3Q9BSH5 251 aaPredicted RBP1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 C11orf49Q9H6J7 331 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 C8orf17Q9NRJ1 99 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 KCNIP2Q9NS61 270 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 C14orf105Q9NVL8 296 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 TAS2R1Q9NYW7 299 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 DNAJC12Q9UKB3 198 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 OR52A1Q9UKL2 312 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 BTRCQ9Y297 605 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 SLC35A3Q9Y2D2 325 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 UTP11Q9Y3A2 253 aaKnown RBP1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 ZCCHC11Q5TAX3 1644 aaKnown RBP1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 SSH2Q76I76 1423 aa1.83□□□□□ -2.12
LAPTM4A-202ENST00000483117 GTF3C1Q12789 2109 aa1.82□□□□□ -2.12
LAPTM4A-202ENST00000483117 ERCC6Q03468 1493 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms