RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 OR2D2Q9H210 308 aa16.65■□□□□ 0.26
SEC13-217ENST00000482647 IFT46Q9NQC8 304 aa16.65■□□□□ 0.26
SEC13-217ENST00000482647 SERTAD4Q9NUC0 356 aa16.65■□□□□ 0.26
SEC13-217ENST00000482647 HLA-DQB1P01920 261 aa16.64■□□□□ 0.25
SEC13-217ENST00000482647 VDAC2P45880 294 aaPredicted RBP16.64■□□□□ 0.25
SEC13-217ENST00000482647 C9orf152Q5JTZ5 239 aa16.64■□□□□ 0.25
SEC13-217ENST00000482647 CCDC59Q9P031 241 aaKnown RBP16.64■□□□□ 0.25
SEC13-217ENST00000482647 OR2W1Q9Y3N9 320 aa16.64■□□□□ 0.25
SEC13-217ENST00000482647 MEIS3P1A6NDR6 274 aa16.63■□□□□ 0.25
SEC13-217ENST00000482647 CCDC160A6NGH7 325 aa16.63■□□□□ 0.25
SEC13-217ENST00000482647 OR5H14A6NHG9 310 aa16.63■□□□□ 0.25
SEC13-217ENST00000482647 SH2D7A6NKC9 451 aaPredicted RBP16.63■□□□□ 0.25
SEC13-217ENST00000482647 PROP1O75360 226 aa16.63■□□□□ 0.25
SEC13-217ENST00000482647 VSIG10L2P0DP72 767 aa16.63■□□□□ 0.25
SEC13-217ENST00000482647 NFYAP23511 347 aaPredicted RBP16.63■□□□□ 0.25
SEC13-217ENST00000482647 SRSF4Q08170 494 aaKnown RBP16.63■□□□□ 0.25
SEC13-217ENST00000482647 KLHDC1Q8N7A1 406 aa16.63■□□□□ 0.25
SEC13-217ENST00000482647 CITED1Q99966 193 aa16.63■□□□□ 0.25
SEC13-217ENST00000482647 PLSCR3Q9NRY6 295 aa16.63■□□□□ 0.25
SEC13-217ENST00000482647 NECAP2Q9NVZ3 263 aa16.63■□□□□ 0.25
SEC13-217ENST00000482647 M0R1X1 148 aa16.62■□□□□ 0.25
SEC13-217ENST00000482647 RGS5O15539 181 aa16.62■□□□□ 0.25
SEC13-217ENST00000482647 FCER2P06734 321 aa16.62■□□□□ 0.25
SEC13-217ENST00000482647 KRTAP10-3P60369 221 aa16.62■□□□□ 0.25
SEC13-217ENST00000482647 FAM131AQ6UXB0 335 aa16.62■□□□□ 0.25
SEC13-217ENST00000482647 SNX29P2Q8IUI4 249 aa16.62■□□□□ 0.25
SEC13-217ENST00000482647 DRAXINQ8NBI3 349 aaPredicted RBP16.62■□□□□ 0.25
SEC13-217ENST00000482647 OR5AP2Q8NGF4 316 aa16.62■□□□□ 0.25
SEC13-217ENST00000482647 OR5AN1Q8NGI8 311 aa16.62■□□□□ 0.25
SEC13-217ENST00000482647 SNAPC3Q92966 411 aa16.62■□□□□ 0.25
SEC13-217ENST00000482647 RASL11BQ9BPW5 248 aa16.62■□□□□ 0.25
SEC13-217ENST00000482647 SCPEP1Q9HB40 452 aa16.62■□□□□ 0.25
SEC13-217ENST00000482647 SDHAF2Q9NX18 166 aa16.62■□□□□ 0.25
SEC13-217ENST00000482647 EXTL2Q9UBQ6 330 aa16.62■□□□□ 0.25
SEC13-217ENST00000482647 H0YJW9 148 aa16.61■□□□□ 0.25
SEC13-217ENST00000482647 H7C2Y5 167 aa16.61■□□□□ 0.25
SEC13-217ENST00000482647 TPPPO94811 219 aa16.61■□□□□ 0.25
SEC13-217ENST00000482647 LUMP51884 338 aaPredicted RBP16.61■□□□□ 0.25
SEC13-217ENST00000482647 F2RL1P55085 397 aa16.61■□□□□ 0.25
SEC13-217ENST00000482647 ACTBP60709 375 aa16.61■□□□□ 0.25
SEC13-217ENST00000482647 GLDNQ6ZMI3 551 aaPredicted RBP16.61■□□□□ 0.25
SEC13-217ENST00000482647 Q8N9W7 124 aa16.61■□□□□ 0.25
SEC13-217ENST00000482647 RBMXL1Q96E39 390 aaKnown RBP16.61■□□□□ 0.25
SEC13-217ENST00000482647 LIN7CQ9NUP9 197 aaKnown RBP16.61■□□□□ 0.25
SEC13-217ENST00000482647 ADAM30Q9UKF2 790 aa16.61■□□□□ 0.25
SEC13-217ENST00000482647 WASHC3Q9Y3C0 194 aa16.61■□□□□ 0.25
SEC13-217ENST00000482647 J3QRK9 145 aa16.6■□□□□ 0.25
SEC13-217ENST00000482647 CTDSP2O14595 271 aa16.6■□□□□ 0.25
SEC13-217ENST00000482647 SLC22A5O76082 557 aa16.6■□□□□ 0.25
SEC13-217ENST00000482647 OR5H8P0DN80 308 aa16.6■□□□□ 0.25
SEC13-217ENST00000482647 FCGR2CP31995 323 aa16.6■□□□□ 0.25
SEC13-217ENST00000482647 MMDQ15546 238 aa16.6■□□□□ 0.25
SEC13-217ENST00000482647 TMEM95Q3KNT9 176 aa16.6■□□□□ 0.25
SEC13-217ENST00000482647 ZNF383Q8NA42 475 aa16.6■□□□□ 0.25
SEC13-217ENST00000482647 SGMS2Q8NHU3 365 aa16.6■□□□□ 0.25
SEC13-217ENST00000482647 GPX8Q8TED1 209 aa16.6■□□□□ 0.25
SEC13-217ENST00000482647 C15orf40Q8WUR7 153 aa16.6■□□□□ 0.25
SEC13-217ENST00000482647 RITA1Q96K30 269 aa16.6■□□□□ 0.25
SEC13-217ENST00000482647 WNT10AQ9GZT5 417 aa16.6■□□□□ 0.25
SEC13-217ENST00000482647 ANAPC10Q9UM13 185 aa16.6■□□□□ 0.25
SEC13-217ENST00000482647 SULT1C2O00338 296 aa16.59■□□□□ 0.25
SEC13-217ENST00000482647 RBBP9O75884 186 aa16.59■□□□□ 0.25
SEC13-217ENST00000482647 TUSC2O75896 110 aa16.59■□□□□ 0.25
SEC13-217ENST00000482647 APOA2P02652 100 aa16.59■□□□□ 0.25
SEC13-217ENST00000482647 NAT1P18440 290 aa16.59■□□□□ 0.25
SEC13-217ENST00000482647 CDK10Q15131 360 aa16.59■□□□□ 0.25
SEC13-217ENST00000482647 FAM71E2Q8N5Q1 922 aa16.59■□□□□ 0.25
SEC13-217ENST00000482647 ZNF645Q8N7E2 425 aa16.59■□□□□ 0.25
SEC13-217ENST00000482647 RNF5Q99942 180 aa16.59■□□□□ 0.25
SEC13-217ENST00000482647 RSL24D1Q9UHA3 163 aaKnown RBP16.59■□□□□ 0.25
SEC13-217ENST00000482647 TAS2R46P59540 309 aa16.58■□□□□ 0.24
SEC13-217ENST00000482647 TAGLNQ01995 201 aaKnown RBP16.58■□□□□ 0.24
SEC13-217ENST00000482647 CENPVQ7Z7K6 275 aaPredicted RBP16.58■□□□□ 0.24
SEC13-217ENST00000482647 PDPNQ86YL7 162 aa16.58■□□□□ 0.24
SEC13-217ENST00000482647 LAX1Q8IWV1 398 aa16.58■□□□□ 0.24
SEC13-217ENST00000482647 NPBQ8NG41 125 aa16.58■□□□□ 0.24
SEC13-217ENST00000482647 ADTRPQ96IZ2 230 aa16.58■□□□□ 0.24
SEC13-217ENST00000482647 SLIRPQ9GZT3 109 aaKnown RBP16.58■□□□□ 0.24
SEC13-217ENST00000482647 MIXL1Q9H2W2 232 aa16.58■□□□□ 0.24
SEC13-217ENST00000482647 ZNF701M0R085 212 aaPredicted RBP16.57■□□□□ 0.24
SEC13-217ENST00000482647 NBR2O15453 112 aa16.57■□□□□ 0.24
SEC13-217ENST00000482647 IGHG2P01859 326 aa16.57■□□□□ 0.24
SEC13-217ENST00000482647 THBS3P49746 956 aa16.57■□□□□ 0.24
SEC13-217ENST00000482647 LINC00205P59089 165 aa16.57■□□□□ 0.24
SEC13-217ENST00000482647 SLC35E3Q7Z769 313 aa16.57■□□□□ 0.24
SEC13-217ENST00000482647 OR5H2Q8NGV7 314 aa16.57■□□□□ 0.24
SEC13-217ENST00000482647 GIMAP1Q8WWP7 306 aa16.57■□□□□ 0.24
SEC13-217ENST00000482647 C5orf30Q96GV9 206 aa16.57■□□□□ 0.24
SEC13-217ENST00000482647 C6orf62Q9GZU0 229 aaPredicted RBP16.57■□□□□ 0.24
SEC13-217ENST00000482647 RBM38Q9H0Z9 239 aaKnown RBP16.57■□□□□ 0.24
SEC13-217ENST00000482647 KIAA1456Q9P272 454 aa16.57■□□□□ 0.24
SEC13-217ENST00000482647 IGKV1D-13A0A0B4J2D9 117 aa16.56■□□□□ 0.24
SEC13-217ENST00000482647 PMP2P02689 132 aa16.56■□□□□ 0.24
SEC13-217ENST00000482647 IGKV1-13P0DP09 117 aa16.56■□□□□ 0.24
SEC13-217ENST00000482647 AADACP22760 399 aa16.56■□□□□ 0.24
SEC13-217ENST00000482647 OVCH2Q7RTZ1 564 aa16.56■□□□□ 0.24
SEC13-217ENST00000482647 LYSMD2Q8IV50 215 aa16.56■□□□□ 0.24
SEC13-217ENST00000482647 FOXRED2Q8IWF2 684 aa16.56■□□□□ 0.24
SEC13-217ENST00000482647 WIPF2Q8TF74 440 aaPredicted RBP16.56■□□□□ 0.24
SEC13-217ENST00000482647 FLYWCH2Q96CP2 140 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms