RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 TCRBP04435 133 aa16.12■□□□□ 0.17
TRAPPC12-220ENST00000482645 CEACAM3P40198 252 aa16.12■□□□□ 0.17
TRAPPC12-220ENST00000482645 LUMP51884 338 aaPredicted RBP16.12■□□□□ 0.17
TRAPPC12-220ENST00000482645 Q3ZCU0 254 aa16.12■□□□□ 0.17
TRAPPC12-220ENST00000482645 LDLRAD3Q86YD5 345 aa16.12■□□□□ 0.17
TRAPPC12-220ENST00000482645 DYNAPQ8N1N2 210 aa16.12■□□□□ 0.17
TRAPPC12-220ENST00000482645 RPEQ96AT9 228 aa16.12■□□□□ 0.17
TRAPPC12-220ENST00000482645 CREB3L1Q96BA8 519 aa16.12■□□□□ 0.17
TRAPPC12-220ENST00000482645 AJUBAQ96IF1 538 aa16.12■□□□□ 0.17
TRAPPC12-220ENST00000482645 SLC5A7Q9GZV3 580 aa16.12■□□□□ 0.17
TRAPPC12-220ENST00000482645 VSIG4Q9Y279 399 aa16.12■□□□□ 0.17
TRAPPC12-220ENST00000482645 SETD2Q9BYW2 2564 aaPredicted RBP16.12■□□□□ 0.17
TRAPPC12-220ENST00000482645 HSD17B6O14756 317 aa16.11■□□□□ 0.17
TRAPPC12-220ENST00000482645 RLN1P04808 185 aa16.11■□□□□ 0.17
TRAPPC12-220ENST00000482645 ECI1P42126 302 aa16.11■□□□□ 0.17
TRAPPC12-220ENST00000482645 REG1BP48304 166 aa16.11■□□□□ 0.17
TRAPPC12-220ENST00000482645 DIAPH2-AS1Q14236 149 aa16.11■□□□□ 0.17
TRAPPC12-220ENST00000482645 PLET1Q6UQ28 207 aa16.11■□□□□ 0.17
TRAPPC12-220ENST00000482645 LINC00311Q8N616 119 aa16.11■□□□□ 0.17
TRAPPC12-220ENST00000482645 C8orf31Q8N9H6 132 aa16.11■□□□□ 0.17
TRAPPC12-220ENST00000482645 MALSU1Q96EH3 234 aa16.11■□□□□ 0.17
TRAPPC12-220ENST00000482645 ABHD14BQ96IU4 210 aa16.11■□□□□ 0.17
TRAPPC12-220ENST00000482645 SLC25A21Q9BQT8 299 aaPredicted RBP16.11■□□□□ 0.17
TRAPPC12-220ENST00000482645 IFI27L2Q9H2X8 130 aa16.11■□□□□ 0.17
TRAPPC12-220ENST00000482645 TNFRSF19Q9NS68 423 aa16.11■□□□□ 0.17
TRAPPC12-220ENST00000482645 RNF150Q9ULK6 438 aa16.11■□□□□ 0.17
TRAPPC12-220ENST00000482645 FLVCR2Q9UPI3 526 aa16.11■□□□□ 0.17
TRAPPC12-220ENST00000482645 PI3P19957 117 aa16.1■□□□□ 0.17
TRAPPC12-220ENST00000482645 IL3RAP26951 378 aa16.1■□□□□ 0.17
TRAPPC12-220ENST00000482645 OXA1LQ15070 435 aa16.1■□□□□ 0.17
TRAPPC12-220ENST00000482645 TPTE2P1Q5T6R2 138 aa16.1■□□□□ 0.17
TRAPPC12-220ENST00000482645 CCBE1Q6UXH8 406 aaPredicted RBP16.1■□□□□ 0.17
TRAPPC12-220ENST00000482645 TMED4Q7Z7H5 227 aa16.1■□□□□ 0.17
TRAPPC12-220ENST00000482645 CENPSQ8N2Z9 138 aa16.1■□□□□ 0.17
TRAPPC12-220ENST00000482645 ZNF418Q8TF45 676 aaPredicted RBP16.1■□□□□ 0.17
TRAPPC12-220ENST00000482645 NUBP2Q9Y5Y2 271 aa16.1■□□□□ 0.17
TRAPPC12-220ENST00000482645 RAB7AP51149 207 aa16.09■□□□□ 0.17
TRAPPC12-220ENST00000482645 LY6G6FQ5SQ64 297 aa16.09■□□□□ 0.17
TRAPPC12-220ENST00000482645 ZNF818PQ6ZRF7 136 aa16.09■□□□□ 0.17
TRAPPC12-220ENST00000482645 SLC38A6Q8IZM9 456 aa16.09■□□□□ 0.17
TRAPPC12-220ENST00000482645 ZDHHC22Q8N966 263 aa16.09■□□□□ 0.17
TRAPPC12-220ENST00000482645 DUSP18Q8NEJ0 188 aa16.09■□□□□ 0.17
TRAPPC12-220ENST00000482645 CHPT1Q8WUD6 406 aa16.09■□□□□ 0.17
TRAPPC12-220ENST00000482645 DUX5Q96PT3 197 aa16.09■□□□□ 0.17
TRAPPC12-220ENST00000482645 CCL28Q9NRJ3 127 aa16.09■□□□□ 0.17
TRAPPC12-220ENST00000482645 C14orf166Q9Y224 244 aaKnown RBP16.09■□□□□ 0.17
TRAPPC12-220ENST00000482645 GPR12P47775 334 aa16.09■□□□□ 0.17
TRAPPC12-220ENST00000482645 RAB25P57735 213 aa16.09■□□□□ 0.17
TRAPPC12-220ENST00000482645 SURF2Q15527 256 aaPredicted RBP16.09■□□□□ 0.17
TRAPPC12-220ENST00000482645 ZNF645Q8N7E2 425 aa16.09■□□□□ 0.17
TRAPPC12-220ENST00000482645 SAA2-SAA4A0A096LPE2 208 aa16.08■□□□□ 0.16
TRAPPC12-220ENST00000482645 LY6LH3BQJ8 138 aa16.08■□□□□ 0.16
TRAPPC12-220ENST00000482645 ITGB1BP1O14713 200 aa16.08■□□□□ 0.16
TRAPPC12-220ENST00000482645 HOXA3O43365 443 aaPredicted RBP16.08■□□□□ 0.16
TRAPPC12-220ENST00000482645 H2AFB2P0C5Z0 115 aa16.08■□□□□ 0.16
TRAPPC12-220ENST00000482645 SAA2P0DJI9 122 aaPredicted RBP16.08■□□□□ 0.16
TRAPPC12-220ENST00000482645 UCP3P55916 312 aa16.08■□□□□ 0.16
TRAPPC12-220ENST00000482645 ABCA11PQ4W5N1 156 aa16.08■□□□□ 0.16
TRAPPC12-220ENST00000482645 PHLDA2Q53GA4 152 aa16.08■□□□□ 0.16
TRAPPC12-220ENST00000482645 MINDY2Q8NBR6 621 aa16.08■□□□□ 0.16
TRAPPC12-220ENST00000482645 SCGB3A2Q96PL1 93 aa16.08■□□□□ 0.16
TRAPPC12-220ENST00000482645 SSX3Q99909 188 aa16.08■□□□□ 0.16
TRAPPC12-220ENST00000482645 AGMATQ9BSE5 352 aa16.08■□□□□ 0.16
TRAPPC12-220ENST00000482645 RSRP1Q9BUV0 290 aa16.08■□□□□ 0.16
TRAPPC12-220ENST00000482645 C5orf66Q9H5L9 145 aa16.08■□□□□ 0.16
TRAPPC12-220ENST00000482645 BEX1Q9HBH7 125 aa16.08■□□□□ 0.16
TRAPPC12-220ENST00000482645 ZNF221Q9UK13 617 aa16.08■□□□□ 0.16
TRAPPC12-220ENST00000482645 GPR132Q9UNW8 380 aa16.08■□□□□ 0.16
TRAPPC12-220ENST00000482645 JMJD1CQ15652 2540 aa16.08■□□□□ 0.16
TRAPPC12-220ENST00000482645 RAB29O14966 203 aa16.07■□□□□ 0.16
TRAPPC12-220ENST00000482645 ANXA7P20073 488 aaKnown RBP16.07■□□□□ 0.16
TRAPPC12-220ENST00000482645 RAB13P51153 203 aa16.07■□□□□ 0.16
TRAPPC12-220ENST00000482645 RPL39P5Q59GN2 51 aa16.07■□□□□ 0.16
TRAPPC12-220ENST00000482645 LPCAT3Q6P1A2 487 aa16.07■□□□□ 0.16
TRAPPC12-220ENST00000482645 Q6YL49 198 aa16.07■□□□□ 0.16
TRAPPC12-220ENST00000482645 ODF3L1Q8IXM7 274 aa16.07■□□□□ 0.16
TRAPPC12-220ENST00000482645 ZFAND1Q8TCF1 268 aa16.07■□□□□ 0.16
TRAPPC12-220ENST00000482645 FAM216AQ8WUB2 273 aa16.07■□□□□ 0.16
TRAPPC12-220ENST00000482645 MEGF9Q9H1U4 602 aa16.07■□□□□ 0.16
TRAPPC12-220ENST00000482645 PIPOXQ9P0Z9 390 aa16.07■□□□□ 0.16
TRAPPC12-220ENST00000482645 NF1P21359 2839 aa16.06■□□□□ 0.16
TRAPPC12-220ENST00000482645 GPR31O00270 319 aa16.06■□□□□ 0.16
TRAPPC12-220ENST00000482645 TNFSF12O43508 249 aa16.06■□□□□ 0.16
TRAPPC12-220ENST00000482645 IGLV2-14P01704 120 aa16.06■□□□□ 0.16
TRAPPC12-220ENST00000482645 IGHV4-59P01825 116 aa16.06■□□□□ 0.16
TRAPPC12-220ENST00000482645 GAPDHP04406 335 aaKnown RBP16.06■□□□□ 0.16
TRAPPC12-220ENST00000482645 CTSDP07339 412 aaPredicted RBP16.06■□□□□ 0.16
TRAPPC12-220ENST00000482645 GNRHRP30968 328 aa16.06■□□□□ 0.16
TRAPPC12-220ENST00000482645 ARHGDIBP52566 201 aa16.06■□□□□ 0.16
TRAPPC12-220ENST00000482645 LRRC75BQ2VPJ9 315 aa16.06■□□□□ 0.16
TRAPPC12-220ENST00000482645 CCDC144NLQ6NUI1 221 aa16.06■□□□□ 0.16
TRAPPC12-220ENST00000482645 TGIF2LXQ8IUE1 241 aa16.06■□□□□ 0.16
TRAPPC12-220ENST00000482645 DRAM1Q8N682 238 aa16.06■□□□□ 0.16
TRAPPC12-220ENST00000482645 ADAD2Q8NCV1 583 aaKnown RBP16.06■□□□□ 0.16
TRAPPC12-220ENST00000482645 RTN4IP1Q8WWV3 396 aaPredicted RBP16.06■□□□□ 0.16
TRAPPC12-220ENST00000482645 C5orf30Q96GV9 206 aa16.06■□□□□ 0.16
TRAPPC12-220ENST00000482645 SLC2A9Q9NRM0 540 aa16.06■□□□□ 0.16
TRAPPC12-220ENST00000482645 H3BUX3 64 aa16.05■□□□□ 0.16
TRAPPC12-220ENST00000482645 TCF21O43680 179 aa16.05■□□□□ 0.16
TRAPPC12-220ENST00000482645 IFNA2P01563 188 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms