RNA–Protein interactions for RNA: ENST00000482227.5

CNKSR1-207, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-207ENST00000482227 PMS2P5A8MQ11 134 aa13.12□□□□□ -0.31
CNKSR1-207ENST00000482227 COX5AP20674 150 aa13.12□□□□□ -0.31
CNKSR1-207ENST00000482227 CBLN1P23435 193 aa13.12□□□□□ -0.31
CNKSR1-207ENST00000482227 MMDQ15546 238 aa13.12□□□□□ -0.31
CNKSR1-207ENST00000482227 WDR74Q6RFH5 385 aaPredicted RBP13.12□□□□□ -0.31
CNKSR1-207ENST00000482227 Q8N976 141 aa13.12□□□□□ -0.31
CNKSR1-207ENST00000482227 RNASE8Q8TDE3 154 aaKnown RBP13.12□□□□□ -0.31
CNKSR1-207ENST00000482227 IL1F10Q8WWZ1 152 aa13.12□□□□□ -0.31
CNKSR1-207ENST00000482227 FOXJ2Q9P0K8 574 aa13.12□□□□□ -0.31
CNKSR1-207ENST00000482227 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.12□□□□□ -0.31
CNKSR1-207ENST00000482227 ZNHIT1O43257 154 aa13.12□□□□□ -0.31
CNKSR1-207ENST00000482227 DUX1O43812 170 aa13.12□□□□□ -0.31
CNKSR1-207ENST00000482227 ZNF16P17020 682 aaPredicted RBP13.12□□□□□ -0.31
CNKSR1-207ENST00000482227 MSMO1Q15800 293 aa13.12□□□□□ -0.31
CNKSR1-207ENST00000482227 OR5AU1Q8NGC0 362 aa13.12□□□□□ -0.31
CNKSR1-207ENST00000482227 OR56B2PQ8NGI1 322 aa13.12□□□□□ -0.31
CNKSR1-207ENST00000482227 TMEM147Q9BVK8 224 aa13.12□□□□□ -0.31
CNKSR1-207ENST00000482227 NPCDR1Q9BY65 106 aa13.12□□□□□ -0.31
CNKSR1-207ENST00000482227 TRBV6-6A0A0A6YYG2 114 aa13.11□□□□□ -0.31
CNKSR1-207ENST00000482227 TRAPPC6AO75865 159 aa13.11□□□□□ -0.31
CNKSR1-207ENST00000482227 SAXO1Q8IYX7 474 aa13.11□□□□□ -0.31
CNKSR1-207ENST00000482227 FGFRL1Q8N441 504 aa13.11□□□□□ -0.31
CNKSR1-207ENST00000482227 STPG4Q8N801 248 aa13.11□□□□□ -0.31
CNKSR1-207ENST00000482227 CPT1CQ8TCG5 803 aa13.11□□□□□ -0.31
CNKSR1-207ENST00000482227 C1QTNF5Q9BXJ0 243 aa13.11□□□□□ -0.31
CNKSR1-207ENST00000482227 UNC13CQ8NB66 2214 aa13.11□□□□□ -0.31
CNKSR1-207ENST00000482227 ZNF407Q9C0G0 2248 aa13.11□□□□□ -0.31
CNKSR1-207ENST00000482227 TRAV24A0A0B4J272 114 aa13.11□□□□□ -0.31
CNKSR1-207ENST00000482227 SYNGR1O43759 233 aa13.11□□□□□ -0.31
CNKSR1-207ENST00000482227 PDE6DO43924 150 aa13.11□□□□□ -0.31
CNKSR1-207ENST00000482227 CTRLP40313 264 aa13.11□□□□□ -0.31
CNKSR1-207ENST00000482227 UBE2G2P60604 165 aa13.11□□□□□ -0.31
CNKSR1-207ENST00000482227 CPEB3Q8NE35 698 aaKnown RBP13.11□□□□□ -0.31
CNKSR1-207ENST00000482227 RDH5Q92781 318 aa13.11□□□□□ -0.31
CNKSR1-207ENST00000482227 SGCZQ96LD1 299 aa13.11□□□□□ -0.31
CNKSR1-207ENST00000482227 OR6C1Q96RD1 312 aa13.11□□□□□ -0.31
CNKSR1-207ENST00000482227 DEFB126Q9BYW3 111 aa13.11□□□□□ -0.31
CNKSR1-207ENST00000482227 FBXL7Q9UJT9 491 aa13.11□□□□□ -0.31
CNKSR1-207ENST00000482227 PRUNE2Q8WUY3 3088 aa13.1□□□□□ -0.31
CNKSR1-207ENST00000482227 TRAV39A0A0B4J263 110 aa13.1□□□□□ -0.31
CNKSR1-207ENST00000482227 FAM90A26D6RGX4 464 aa13.1□□□□□ -0.31
CNKSR1-207ENST00000482227 CBR3O75828 277 aa13.1□□□□□ -0.31
CNKSR1-207ENST00000482227 TDGF1P13385 188 aa13.1□□□□□ -0.31
CNKSR1-207ENST00000482227 CRISP2P16562 243 aa13.1□□□□□ -0.31
CNKSR1-207ENST00000482227 RPS16P62249 146 aaKnown RBP13.1□□□□□ -0.31
CNKSR1-207ENST00000482227 TRIP6Q15654 476 aaKnown RBP13.1□□□□□ -0.31
CNKSR1-207ENST00000482227 HLA-BQ31612 363 aa13.1□□□□□ -0.31
CNKSR1-207ENST00000482227 ZNF488Q96MN9 340 aa13.1□□□□□ -0.31
CNKSR1-207ENST00000482227 CIB3Q96Q77 187 aaPredicted RBP13.1□□□□□ -0.31
CNKSR1-207ENST00000482227 FOXB1Q99853 325 aa13.1□□□□□ -0.31
CNKSR1-207ENST00000482227 G3V3Y1 287 aa13.1□□□□□ -0.31
CNKSR1-207ENST00000482227 CCL25O15444 150 aa13.1□□□□□ -0.31
CNKSR1-207ENST00000482227 PROK2Q9HC23 129 aa13.1□□□□□ -0.31
CNKSR1-207ENST00000482227 CLN8Q9UBY8 286 aa13.1□□□□□ -0.31
CNKSR1-207ENST00000482227 HSPB7Q9UBY9 170 aa13.1□□□□□ -0.31
CNKSR1-207ENST00000482227 WIPI2Q9Y4P8 454 aa13.1□□□□□ -0.31
CNKSR1-207ENST00000482227 KRASP01116 189 aa13.09□□□□□ -0.31
CNKSR1-207ENST00000482227 FRMD6-AS1P0C7T7 363 aa13.09□□□□□ -0.31
CNKSR1-207ENST00000482227 SPINK2P20155 84 aa13.09□□□□□ -0.31
CNKSR1-207ENST00000482227 ATP6V1FQ16864 119 aa13.09□□□□□ -0.31
CNKSR1-207ENST00000482227 CEACAM16Q2WEN9 425 aa13.09□□□□□ -0.31
CNKSR1-207ENST00000482227 GCSAMLQ5JQS6 135 aa13.09□□□□□ -0.31
CNKSR1-207ENST00000482227 Q8N7P7 452 aa13.09□□□□□ -0.31
CNKSR1-207ENST00000482227 OR5A2Q8NGI9 324 aa13.09□□□□□ -0.31
CNKSR1-207ENST00000482227 LRP5LA4QPB2 252 aa13.09□□□□□ -0.31
CNKSR1-207ENST00000482227 NPIPB11E5RHQ5 1161 aa13.09□□□□□ -0.31
CNKSR1-207ENST00000482227 TRAPPC2LH3BP13 241 aa13.09□□□□□ -0.31
CNKSR1-207ENST00000482227 WDR1O75083 606 aa13.09□□□□□ -0.31
CNKSR1-207ENST00000482227 LIFP15018 202 aa13.09□□□□□ -0.31
CNKSR1-207ENST00000482227 SLC23A3Q6PIS1 610 aa13.09□□□□□ -0.31
CNKSR1-207ENST00000482227 COLCA1Q6ZS62 124 aa13.09□□□□□ -0.31
CNKSR1-207ENST00000482227 RABEPKQ7Z6M1 372 aa13.09□□□□□ -0.31
CNKSR1-207ENST00000482227 PSMF1Q92530 271 aa13.09□□□□□ -0.31
CNKSR1-207ENST00000482227 MRPL18Q9H0U6 180 aaKnown RBP13.09□□□□□ -0.31
CNKSR1-207ENST00000482227 LIN7CQ9NUP9 197 aaKnown RBP13.09□□□□□ -0.31
CNKSR1-207ENST00000482227 SLC45A2Q9UMX9 530 aa13.09□□□□□ -0.31
CNKSR1-207ENST00000482227 CELA2AP08217 269 aa13.08□□□□□ -0.32
CNKSR1-207ENST00000482227 CCL3P10147 92 aa13.08□□□□□ -0.32
CNKSR1-207ENST00000482227 TIMP3P35625 211 aa13.08□□□□□ -0.32
CNKSR1-207ENST00000482227 CDC34P49427 236 aaPredicted RBP13.08□□□□□ -0.32
CNKSR1-207ENST00000482227 CEACAM21Q3KPI0 293 aa13.08□□□□□ -0.32
CNKSR1-207ENST00000482227 SF3B5Q9BWJ5 86 aaKnown RBP13.08□□□□□ -0.32
CNKSR1-207ENST00000482227 PRDM14Q9GZV8 571 aa13.08□□□□□ -0.32
CNKSR1-207ENST00000482227 KITLGP21583 273 aa13.08□□□□□ -0.32
CNKSR1-207ENST00000482227 MKXQ8IYA7 352 aa13.08□□□□□ -0.32
CNKSR1-207ENST00000482227 OR4B1Q8NGF8 309 aa13.08□□□□□ -0.32
CNKSR1-207ENST00000482227 UBALD1Q8TB05 177 aa13.08□□□□□ -0.32
CNKSR1-207ENST00000482227 KCNIP2Q9NS61 270 aa13.08□□□□□ -0.32
CNKSR1-207ENST00000482227 TRAV38-1A0A0B4J264 116 aa13.07□□□□□ -0.32
CNKSR1-207ENST00000482227 MDFIC2A0A1B0GVS7 189 aa13.07□□□□□ -0.32
CNKSR1-207ENST00000482227 ZNF716A6NP11 495 aa13.07□□□□□ -0.32
CNKSR1-207ENST00000482227 F6UZH7 168 aa13.07□□□□□ -0.32
CNKSR1-207ENST00000482227 DEGS1O15121 323 aa13.07□□□□□ -0.32
CNKSR1-207ENST00000482227 THBS3P49746 956 aa13.07□□□□□ -0.32
CNKSR1-207ENST00000482227 DSCR4P56555 118 aaPredicted RBP13.07□□□□□ -0.32
CNKSR1-207ENST00000482227 RAC1P63000 192 aa13.07□□□□□ -0.32
CNKSR1-207ENST00000482227 VWC2Q2TAL6 325 aa13.07□□□□□ -0.32
CNKSR1-207ENST00000482227 TMPRSS7Q7RTY8 843 aa13.07□□□□□ -0.32
CNKSR1-207ENST00000482227 BAGE3Q86Y29 109 aa13.07□□□□□ -0.32
CNKSR1-207ENST00000482227 BAGE2Q86Y30 109 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms