RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 OR8I2Q8N0Y5 310 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 ANKRD29Q8N6D5 301 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 GDPD1Q8N9F7 314 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 TMEM229BQ8NBD8 167 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 OR10G8Q8NGN5 311 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 OR9G1Q8NH87 305 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 SMIM8Q96KF7 97 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 IGF2BP2-AS1Q96M15 143 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 TSPAN32Q96QS1 320 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 OR2M4Q96R27 311 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 F2RL3Q96RI0 385 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 NRTNQ99748 197 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 NAA38Q9BRA0 125 aaKnown RBP3.14□□□□□ -1.91
VPS41-212ENST00000482217 NKX6-2Q9C056 277 aaPredicted RBP3.14□□□□□ -1.91
VPS41-212ENST00000482217 CHST6Q9GZX3 395 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 HEBP1Q9NRV9 189 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 MRPL16Q9NX20 251 aaKnown RBP3.14□□□□□ -1.91
VPS41-212ENST00000482217 RPS6KB2Q9UBS0 482 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 CYSLTR1Q9Y271 337 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 HS3ST2Q9Y278 367 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 WASHC3Q9Y3C0 194 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 KIAA1671Q9BY89 1806 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 TSPOAP1O95153 1857 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 MED23Q9ULK4 1368 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 TECPR2O15040 1411 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 IGKV1-27A0A075B6S5 117 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 hCG_1818297A0A087WSY0 165 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 IGHV3-38A0A0C4DH36 116 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 KNCNA6PVL3 124 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 A8MT66 165 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 LEUTXA8MZ59 168 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 KLLNB2CW77 178 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 K7EQD1 137 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 M0R2Z0 102 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 ISLRO14498 428 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 SRSF10O75494 262 aaKnown RBP3.13□□□□□ -1.91
VPS41-212ENST00000482217 NDUFC2O95298 119 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 OR2H2O95918 312 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 CXorf1O96002 111 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 NRASP01111 189 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 IGHG1P01857 330 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 OPN1SWP03999 348 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 ERGP11308 486 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 PSG2P11465 335 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 IGLL1P15814 213 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 NTF3P20783 257 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 CSRP1P21291 193 aaKnown RBP3.13□□□□□ -1.91
VPS41-212ENST00000482217 EVI2AP22794 236 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 GATA2P23769 480 aaPredicted RBP3.13□□□□□ -1.91
VPS41-212ENST00000482217 CASP1P29466 404 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 IL2RGP31785 369 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 CXCL12P48061 93 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 TAF6P49848 677 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 GFERP55789 205 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 MRPS10P82664 201 aaKnown RBP3.13□□□□□ -1.91
VPS41-212ENST00000482217 PSG9Q00887 426 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 ENDOGQ14249 297 aaKnown RBP3.13□□□□□ -1.91
VPS41-212ENST00000482217 HERPUD1Q15011 391 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 FCN2Q15485 313 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 SSX1Q16384 188 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 ZNF239Q16600 458 aaKnown RBP3.13□□□□□ -1.91
VPS41-212ENST00000482217 C6orf99Q4VX62 202 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 LRRC10Q5BKY1 277 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 MUC21Q5SSG8 566 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 C11orf71Q6IPW1 123 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 DNAJC24Q6P3W2 148 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 PRSS54Q6PEW0 395 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 SBSNQ6UWP8 590 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 C17orf82Q86X59 251 aaPredicted RBP3.13□□□□□ -1.91
VPS41-212ENST00000482217 RAB42Q8N4Z0 105 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 C12orf45Q8N5I9 185 aaPredicted RBP3.13□□□□□ -1.91
VPS41-212ENST00000482217 ZIC4Q8N9L1 334 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 OR5A1Q8NGJ0 315 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 TERB2Q8NHR7 220 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 ZNF418Q8TF45 676 aaPredicted RBP3.13□□□□□ -1.91
VPS41-212ENST00000482217 TMEM159Q96B96 161 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 ISOC1Q96CN7 298 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 STARD4Q96DR4 205 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 ADAT3Q96EY9 351 aaPredicted RBP3.13□□□□□ -1.91
VPS41-212ENST00000482217 PRAC1Q96KF2 57 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 SRMSQ9H3Y6 488 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 JPT2Q9H910 190 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 NOX3Q9HBY0 568 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 SCN3BQ9NY72 215 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 COQ4Q9Y3A0 265 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 ECM29Q5VYK3 1845 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 CECR2Q9BXF3 1484 aa3.13□□□□□ -1.91
VPS41-212ENST00000482217 ZNFX1Q9P2E3 1918 aaKnown RBP3.13□□□□□ -1.91
VPS41-212ENST00000482217 MED14O60244 1454 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 MBD5Q9P267 1494 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 IGHV3OR16-13A0A075B7E8 117 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 TRAV8-3A0A0A6YYJ7 113 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 TRAV39A0A0B4J263 110 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 A0A0X1KG70 313 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 A0A1B0GV50 99 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 C5orf49A4QMS7 147 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 HCRTR1O43613 425 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 TRAF3IP2O43734 574 aaPredicted RBP3.12□□□□□ -1.91
VPS41-212ENST00000482217 SNAP91O60641 907 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 HLA-DRB1P01911 266 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms