RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 SEC14L6B5MCN3 397 aa12.89□□□□□ -0.35
C9orf3-218ENST00000482056 TIMM8AO60220 97 aaPredicted RBP12.89□□□□□ -0.35
C9orf3-218ENST00000482056 RAMP3O60896 148 aa12.89□□□□□ -0.35
C9orf3-218ENST00000482056 YIF1AO95070 293 aa12.89□□□□□ -0.35
C9orf3-218ENST00000482056 P0C879 139 aa12.89□□□□□ -0.35
C9orf3-218ENST00000482056 AESQ08117 197 aa12.89□□□□□ -0.35
C9orf3-218ENST00000482056 SMIM21Q3B7S5 101 aa12.89□□□□□ -0.35
C9orf3-218ENST00000482056 OR2B11Q5JQS5 317 aa12.89□□□□□ -0.35
C9orf3-218ENST00000482056 TRAT1Q6PIZ9 186 aa12.89□□□□□ -0.35
C9orf3-218ENST00000482056 ZNF66Q6ZN08 573 aa12.89□□□□□ -0.35
C9orf3-218ENST00000482056 H2BFWTQ7Z2G1 175 aa12.89□□□□□ -0.35
C9orf3-218ENST00000482056 C1orf162Q8NEQ5 155 aaPredicted RBP12.89□□□□□ -0.35
C9orf3-218ENST00000482056 AGMATQ9BSE5 352 aa12.89□□□□□ -0.35
C9orf3-218ENST00000482056 GAR1Q9NY12 217 aaKnown RBP12.89□□□□□ -0.35
C9orf3-218ENST00000482056 MIOXQ9UGB7 285 aa12.89□□□□□ -0.35
C9orf3-218ENST00000482056 KNTC1P50748 2209 aa12.89□□□□□ -0.35
C9orf3-218ENST00000482056 KIAA2026Q5HYC2 2103 aa12.89□□□□□ -0.35
C9orf3-218ENST00000482056 CTXND1A0A1B0GTU2 59 aa12.89□□□□□ -0.35
C9orf3-218ENST00000482056 IFNL4K9M1U5 179 aa12.89□□□□□ -0.35
C9orf3-218ENST00000482056 M0R296 226 aa12.89□□□□□ -0.35
C9orf3-218ENST00000482056 S1PR2O95136 353 aa12.89□□□□□ -0.35
C9orf3-218ENST00000482056 IGHG3P01860 377 aa12.89□□□□□ -0.35
C9orf3-218ENST00000482056 MZT1Q08AG7 82 aa12.89□□□□□ -0.35
C9orf3-218ENST00000482056 EIF4EBP1Q13541 118 aaPredicted RBP12.89□□□□□ -0.35
C9orf3-218ENST00000482056 TMPRSS7Q7RTY8 843 aa12.89□□□□□ -0.35
C9orf3-218ENST00000482056 ZNF709Q8N972 641 aa12.89□□□□□ -0.35
C9orf3-218ENST00000482056 CNEP1R1Q8N9A8 125 aa12.89□□□□□ -0.35
C9orf3-218ENST00000482056 DTD1Q8TEA8 209 aa12.89□□□□□ -0.35
C9orf3-218ENST00000482056 LURAP1Q96LR2 239 aa12.89□□□□□ -0.35
C9orf3-218ENST00000482056 HSD17B10Q99714 261 aaKnown RBP12.89□□□□□ -0.35
C9orf3-218ENST00000482056 MRPL37Q9BZE1 423 aaKnown RBP12.89□□□□□ -0.35
C9orf3-218ENST00000482056 MANBALQ9NQG1 85 aa12.89□□□□□ -0.35
C9orf3-218ENST00000482056 C1QTNF9BB2RNN3 333 aa12.88□□□□□ -0.35
C9orf3-218ENST00000482056 WNT9BO14905 357 aa12.88□□□□□ -0.35
C9orf3-218ENST00000482056 ATXN7O15265 892 aaPredicted RBP12.88□□□□□ -0.35
C9orf3-218ENST00000482056 MLNRO43193 412 aa12.88□□□□□ -0.35
C9orf3-218ENST00000482056 NDUFS6O75380 124 aaKnown RBP12.88□□□□□ -0.35
C9orf3-218ENST00000482056 RBMXL2O75526 392 aaKnown RBP12.88□□□□□ -0.35
C9orf3-218ENST00000482056 LY86O95711 162 aa12.88□□□□□ -0.35
C9orf3-218ENST00000482056 COX5AP20674 150 aa12.88□□□□□ -0.35
C9orf3-218ENST00000482056 FGF7P21781 194 aa12.88□□□□□ -0.35
C9orf3-218ENST00000482056 RPL30P62888 115 aaKnown RBP12.88□□□□□ -0.35
C9orf3-218ENST00000482056 PMP22Q01453 160 aa12.88□□□□□ -0.35
C9orf3-218ENST00000482056 MEF2BQ02080 365 aaPredicted RBP12.88□□□□□ -0.35
C9orf3-218ENST00000482056 CXorf67Q86X51 503 aaPredicted RBP12.88□□□□□ -0.35
C9orf3-218ENST00000482056 MRGPRDQ8TDS7 321 aa12.88□□□□□ -0.35
C9orf3-218ENST00000482056 SMIM7Q9BQ49 75 aa12.88□□□□□ -0.35
C9orf3-218ENST00000482056 ACTR3CQ9C0K3 210 aaPredicted RBP12.88□□□□□ -0.35
C9orf3-218ENST00000482056 LINC00587B1AMM8 73 aa12.87□□□□□ -0.35
C9orf3-218ENST00000482056 C17orf112F2Z3M2 114 aa12.87□□□□□ -0.35
C9orf3-218ENST00000482056 PPP1R2P9O14990 202 aa12.87□□□□□ -0.35
C9orf3-218ENST00000482056 SPINT2O43291 252 aa12.87□□□□□ -0.35
C9orf3-218ENST00000482056 HIST1H2BKO60814 126 aa12.87□□□□□ -0.35
C9orf3-218ENST00000482056 IGKV3-15P01624 115 aa12.87□□□□□ -0.35
C9orf3-218ENST00000482056 TRGC2P03986 189 aa12.87□□□□□ -0.35
C9orf3-218ENST00000482056 HIST1H2BJP06899 126 aa12.87□□□□□ -0.35
C9orf3-218ENST00000482056 HIST1H2BOP23527 126 aa12.87□□□□□ -0.35
C9orf3-218ENST00000482056 CD82P27701 267 aa12.87□□□□□ -0.35
C9orf3-218ENST00000482056 GCH1P30793 250 aa12.87□□□□□ -0.35
C9orf3-218ENST00000482056 HIST1H2BBP33778 126 aa12.87□□□□□ -0.35
C9orf3-218ENST00000482056 HIST1H2BDP58876 126 aa12.87□□□□□ -0.35
C9orf3-218ENST00000482056 HIST1H2BCP62807 126 aa12.87□□□□□ -0.35
C9orf3-218ENST00000482056 HIST2H2BEQ16778 126 aa12.87□□□□□ -0.35
C9orf3-218ENST00000482056 TMEM241Q24JQ0 296 aa12.87□□□□□ -0.35
C9orf3-218ENST00000482056 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.87□□□□□ -0.35
C9orf3-218ENST00000482056 NCR3LG1Q68D85 454 aa12.87□□□□□ -0.35
C9orf3-218ENST00000482056 ZNF826PQ6ZT77 177 aa12.87□□□□□ -0.35
C9orf3-218ENST00000482056 C11orf53Q8IXP5 236 aa12.87□□□□□ -0.35
C9orf3-218ENST00000482056 RPP25LQ8N5L8 163 aaKnown RBP12.87□□□□□ -0.35
C9orf3-218ENST00000482056 HIST1H2BHQ93079 126 aa12.87□□□□□ -0.35
C9orf3-218ENST00000482056 COQ2Q96H96 371 aa12.87□□□□□ -0.35
C9orf3-218ENST00000482056 HIST1H2BNQ99877 126 aa12.87□□□□□ -0.35
C9orf3-218ENST00000482056 HIST1H2BMQ99879 126 aa12.87□□□□□ -0.35
C9orf3-218ENST00000482056 CLN8Q9UBY8 286 aa12.87□□□□□ -0.35
C9orf3-218ENST00000482056 FREM2Q5SZK8 3169 aa12.87□□□□□ -0.35
C9orf3-218ENST00000482056 TRBV24-1A0A075B6N3 115 aa12.87□□□□□ -0.35
C9orf3-218ENST00000482056 C17orf98A8MV24 154 aa12.87□□□□□ -0.35
C9orf3-218ENST00000482056 TMEM250H0YL14 139 aa12.87□□□□□ -0.35
C9orf3-218ENST00000482056 KITLGP21583 273 aa12.87□□□□□ -0.35
C9orf3-218ENST00000482056 ZNF718Q3SXZ3 478 aa12.87□□□□□ -0.35
C9orf3-218ENST00000482056 WDR25Q64LD2 544 aaPredicted RBP12.87□□□□□ -0.35
C9orf3-218ENST00000482056 WDR82Q6UXN9 313 aa12.87□□□□□ -0.35
C9orf3-218ENST00000482056 WDR31Q8NA23 367 aa12.87□□□□□ -0.35
C9orf3-218ENST00000482056 OR10G9Q8NGN4 311 aa12.87□□□□□ -0.35
C9orf3-218ENST00000482056 OR10G7Q8NGN6 311 aa12.87□□□□□ -0.35
C9orf3-218ENST00000482056 GGACTQ9BVM4 153 aa12.87□□□□□ -0.35
C9orf3-218ENST00000482056 CHD3Q12873 2000 aaKnown RBP12.86□□□□□ -0.35
C9orf3-218ENST00000482056 AGFG2O95081 481 aa12.86□□□□□ -0.35
C9orf3-218ENST00000482056 ADH4P08319 380 aa12.86□□□□□ -0.35
C9orf3-218ENST00000482056 COL10A1Q03692 680 aa12.86□□□□□ -0.35
C9orf3-218ENST00000482056 GUSBP1Q15486 140 aa12.86□□□□□ -0.35
C9orf3-218ENST00000482056 ADIRFQ15847 76 aa12.86□□□□□ -0.35
C9orf3-218ENST00000482056 FFAR4Q5NUL3 377 aa12.86□□□□□ -0.35
C9orf3-218ENST00000482056 BTNL3Q6UXE8 466 aa12.86□□□□□ -0.35
C9orf3-218ENST00000482056 CYP2G1PQ6ZSU1 146 aa12.86□□□□□ -0.35
C9orf3-218ENST00000482056 BEND4Q6ZU67 534 aa12.86□□□□□ -0.35
C9orf3-218ENST00000482056 C1orf174Q8IYL3 243 aa12.86□□□□□ -0.35
C9orf3-218ENST00000482056 C5orf30Q96GV9 206 aa12.86□□□□□ -0.35
C9orf3-218ENST00000482056 OR5H1A6NKK0 313 aa12.85□□□□□ -0.35
C9orf3-218ENST00000482056 ZG16O60844 167 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 372 ms