RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 MLLT11Q13015 90 aaPredicted RBP14.4□□□□□ -0.1
CLK1-211ENST00000481641 PLGLAQ15195 96 aa14.4□□□□□ -0.1
CLK1-211ENST00000481641 C2orf76Q3KRA6 126 aa14.4□□□□□ -0.1
CLK1-211ENST00000481641 C19orf54Q5BKX5 351 aa14.4□□□□□ -0.1
CLK1-211ENST00000481641 PLAC9Q5JTB6 97 aa14.4□□□□□ -0.1
CLK1-211ENST00000481641 FAM3DQ96BQ1 224 aa14.4□□□□□ -0.1
CLK1-211ENST00000481641 CMSS1Q9BQ75 279 aaKnown RBP14.4□□□□□ -0.1
CLK1-211ENST00000481641 FAM103A1Q9BTL3 118 aaKnown RBP14.4□□□□□ -0.1
CLK1-211ENST00000481641 ISYNA1Q9NPH2 558 aa14.4□□□□□ -0.1
CLK1-211ENST00000481641 HSF4Q9ULV5 492 aa14.4□□□□□ -0.1
CLK1-211ENST00000481641 OR5H14A6NHG9 310 aa14.39□□□□□ -0.11
CLK1-211ENST00000481641 ARL6IP5O75915 188 aa14.39□□□□□ -0.11
CLK1-211ENST00000481641 ZBTB25P24278 435 aa14.39□□□□□ -0.11
CLK1-211ENST00000481641 CRHBPP24387 322 aa14.39□□□□□ -0.11
CLK1-211ENST00000481641 RUNX1Q01196 453 aa14.39□□□□□ -0.11
CLK1-211ENST00000481641 ZNF616Q08AN1 781 aa14.39□□□□□ -0.11
CLK1-211ENST00000481641 HES5Q5TA89 166 aa14.39□□□□□ -0.11
CLK1-211ENST00000481641 ZNF660Q6AZW8 331 aaPredicted RBP14.39□□□□□ -0.11
CLK1-211ENST00000481641 OR5AN1Q8NGI8 311 aa14.39□□□□□ -0.11
CLK1-211ENST00000481641 ABHD5Q8WTS1 349 aa14.39□□□□□ -0.11
CLK1-211ENST00000481641 DCUN1D4Q92564 292 aa14.39□□□□□ -0.11
CLK1-211ENST00000481641 MGLLQ99685 303 aa14.39□□□□□ -0.11
CLK1-211ENST00000481641 WASHC3Q9Y3C0 194 aa14.39□□□□□ -0.11
CLK1-211ENST00000481641 KMT2CQ8NEZ4 4911 aaKnown RBP14.39□□□□□ -0.11
CLK1-211ENST00000481641 TMEM272A0A1B0GTI8 110 aa14.38□□□□□ -0.11
CLK1-211ENST00000481641 ITGB1BP1O14713 200 aa14.38□□□□□ -0.11
CLK1-211ENST00000481641 OR8U8P0C7N1 319 aa14.38□□□□□ -0.11
CLK1-211ENST00000481641 MC5RP33032 325 aa14.38□□□□□ -0.11
CLK1-211ENST00000481641 DCTN2Q13561 401 aaKnown RBP14.38□□□□□ -0.11
CLK1-211ENST00000481641 TRAM1Q15629 374 aa14.38□□□□□ -0.11
CLK1-211ENST00000481641 PRSS48Q7RTY5 328 aa14.38□□□□□ -0.11
CLK1-211ENST00000481641 ZNF383Q8NA42 475 aa14.38□□□□□ -0.11
CLK1-211ENST00000481641 C12orf4Q9NQ89 552 aa14.38□□□□□ -0.11
CLK1-211ENST00000481641 METTL1Q9UBP6 276 aaKnown RBP14.38□□□□□ -0.11
CLK1-211ENST00000481641 FOXA2Q9Y261 457 aaPredicted RBP14.38□□□□□ -0.11
CLK1-211ENST00000481641 NUBP2Q9Y5Y2 271 aa14.38□□□□□ -0.11
CLK1-211ENST00000481641 V9GY05 133 aa14.38□□□□□ -0.11
CLK1-211ENST00000481641 TENM3Q9P273 2699 aa14.37□□□□□ -0.11
CLK1-211ENST00000481641 LDLRAD4O15165 306 aa14.37□□□□□ -0.11
CLK1-211ENST00000481641 DENRO43583 198 aaKnown RBP14.37□□□□□ -0.11
CLK1-211ENST00000481641 CD3GP09693 182 aa14.37□□□□□ -0.11
CLK1-211ENST00000481641 PSMA1P25786 263 aaKnown RBP14.37□□□□□ -0.11
CLK1-211ENST00000481641 CRIP2P52943 208 aaPredicted RBP14.37□□□□□ -0.11
CLK1-211ENST00000481641 SLURP1P55000 103 aa14.37□□□□□ -0.11
CLK1-211ENST00000481641 PSG5Q15238 335 aa14.37□□□□□ -0.11
CLK1-211ENST00000481641 EDARADDQ8WWZ3 215 aa14.37□□□□□ -0.11
CLK1-211ENST00000481641 PTX4Q96A99 478 aa14.37□□□□□ -0.11
CLK1-211ENST00000481641 ASCL2Q99929 193 aa14.37□□□□□ -0.11
CLK1-211ENST00000481641 MGAT4AQ9UM21 535 aa14.37□□□□□ -0.11
CLK1-211ENST00000481641 SORL1Q92673 2214 aa14.37□□□□□ -0.11
CLK1-211ENST00000481641 SHISA3A0PJX4 238 aa14.36□□□□□ -0.11
CLK1-211ENST00000481641 TRDCB7Z8K6 153 aa14.36□□□□□ -0.11
CLK1-211ENST00000481641 RBBP9O75884 186 aa14.36□□□□□ -0.11
CLK1-211ENST00000481641 LY86O95711 162 aa14.36□□□□□ -0.11
CLK1-211ENST00000481641 IGKV1-16P04430 117 aa14.36□□□□□ -0.11
CLK1-211ENST00000481641 OR10A3P58181 314 aa14.36□□□□□ -0.11
CLK1-211ENST00000481641 SSX1Q16384 188 aa14.36□□□□□ -0.11
CLK1-211ENST00000481641 MOGAT2Q3SYC2 334 aa14.36□□□□□ -0.11
CLK1-211ENST00000481641 UNQ5815/PRO19632Q6UWF5 114 aa14.36□□□□□ -0.11
CLK1-211ENST00000481641 PPP1R27Q86WC6 154 aa14.36□□□□□ -0.11
CLK1-211ENST00000481641 OR56B1Q8NGI3 324 aa14.36□□□□□ -0.11
CLK1-211ENST00000481641 DLX4Q92988 240 aaPredicted RBP14.36□□□□□ -0.11
CLK1-211ENST00000481641 MS4A10Q96PG2 267 aa14.36□□□□□ -0.11
CLK1-211ENST00000481641 TOLLIPQ9H0E2 274 aa14.36□□□□□ -0.11
CLK1-211ENST00000481641 TPSG1Q9NRR2 321 aa14.36□□□□□ -0.11
CLK1-211ENST00000481641 RDH8Q9NYR8 311 aa14.36□□□□□ -0.11
CLK1-211ENST00000481641 ZNF221Q9UK13 617 aa14.36□□□□□ -0.11
CLK1-211ENST00000481641 ZNF256Q9Y2P7 627 aaPredicted RBP14.36□□□□□ -0.11
CLK1-211ENST00000481641 KCNK7Q9Y2U2 307 aa14.36□□□□□ -0.11
CLK1-211ENST00000481641 IGHV4OR15-8A0A075B7B6 117 aa14.35□□□□□ -0.11
CLK1-211ENST00000481641 A0A087WW49 117 aa14.35□□□□□ -0.11
CLK1-211ENST00000481641 OVOL1O14753 267 aa14.35□□□□□ -0.11
CLK1-211ENST00000481641 CA2P00918 260 aa14.35□□□□□ -0.11
CLK1-211ENST00000481641 IGHV3-11P01762 117 aa14.35□□□□□ -0.11
CLK1-211ENST00000481641 RPS16P62249 146 aaKnown RBP14.35□□□□□ -0.11
CLK1-211ENST00000481641 LFNGQ8NES3 379 aa14.35□□□□□ -0.11
CLK1-211ENST00000481641 MAFIPQ8WZ33 124 aa14.35□□□□□ -0.11
CLK1-211ENST00000481641 CNBD2Q96M20 576 aa14.35□□□□□ -0.11
CLK1-211ENST00000481641 WWC2-AS2Q96NR7 200 aa14.35□□□□□ -0.11
CLK1-211ENST00000481641 GHITMQ9H3K2 345 aa14.35□□□□□ -0.11
CLK1-211ENST00000481641 ACOT13Q9NPJ3 140 aa14.35□□□□□ -0.11
CLK1-211ENST00000481641 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.35□□□□□ -0.115e-7■□□□□ 10.8
CLK1-211ENST00000481641 RAB22AQ9UL26 194 aa14.35□□□□□ -0.11
CLK1-211ENST00000481641 A0A0B4J203 849 aa14.34□□□□□ -0.11
CLK1-211ENST00000481641 LINC01619G3V211 115 aa14.34□□□□□ -0.11
CLK1-211ENST00000481641 M0R1X1 148 aa14.34□□□□□ -0.11
CLK1-211ENST00000481641 TFAP2AP05549 437 aa14.34□□□□□ -0.11
CLK1-211ENST00000481641 TMEM267Q0VDI3 215 aaPredicted RBP14.34□□□□□ -0.11
CLK1-211ENST00000481641 ACTBL2Q562R1 376 aa14.34□□□□□ -0.11
CLK1-211ENST00000481641 IGSF11Q5DX21 431 aa14.34□□□□□ -0.11
CLK1-211ENST00000481641 CD200R1LQ6Q8B3 271 aa14.34□□□□□ -0.11
CLK1-211ENST00000481641 IZUMO2Q6UXV1 221 aa14.34□□□□□ -0.11
CLK1-211ENST00000481641 RNF5Q99942 180 aa14.34□□□□□ -0.11
CLK1-211ENST00000481641 A0A075B6Q4 140 aa14.33□□□□□ -0.12
CLK1-211ENST00000481641 BET1O15155 118 aa14.33□□□□□ -0.12
CLK1-211ENST00000481641 FABP7O15540 132 aa14.33□□□□□ -0.12
CLK1-211ENST00000481641 SLC25A17O43808 307 aa14.33□□□□□ -0.12
CLK1-211ENST00000481641 SAP30O75446 220 aa14.33□□□□□ -0.12
CLK1-211ENST00000481641 LGALS1P09382 135 aaKnown RBP14.33□□□□□ -0.12
CLK1-211ENST00000481641 GSTT2P0CG29 244 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms