RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 HTR1DP28221 377 aa9.83□□□□□ -0.84
PTPRF-213ENST00000481019 GNMTQ14749 295 aa9.83□□□□□ -0.84
PTPRF-213ENST00000481019 SURF2Q15527 256 aaPredicted RBP9.83□□□□□ -0.84
PTPRF-213ENST00000481019 AANATQ16613 207 aa9.83□□□□□ -0.84
PTPRF-213ENST00000481019 DHRS11Q6UWP2 260 aa9.83□□□□□ -0.84
PTPRF-213ENST00000481019 IDO2Q6ZQW0 420 aa9.83□□□□□ -0.84
PTPRF-213ENST00000481019 OR51S1Q8NGJ8 323 aa9.83□□□□□ -0.84
PTPRF-213ENST00000481019 OR5R1Q8NH85 324 aa9.83□□□□□ -0.84
PTPRF-213ENST00000481019 GIMAP1Q8WWP7 306 aa9.83□□□□□ -0.84
PTPRF-213ENST00000481019 GALMQ96C23 342 aa9.83□□□□□ -0.84
PTPRF-213ENST00000481019 MBNL3Q9NUK0 354 aaKnown RBP9.83□□□□□ -0.84
PTPRF-213ENST00000481019 DPM3Q9P2X0 92 aa9.83□□□□□ -0.84
PTPRF-213ENST00000481019 ZNF230Q9UIE0 474 aaPredicted RBP9.83□□□□□ -0.84
PTPRF-213ENST00000481019 SIGLEC9Q9Y336 463 aa9.83□□□□□ -0.84
PTPRF-213ENST00000481019 VWFP04275 2813 aa9.83□□□□□ -0.84
PTPRF-213ENST00000481019 NBEAL1Q6ZS30 2694 aa9.82□□□□□ -0.84
PTPRF-213ENST00000481019 INMT-MINDY4F8WBC2 141 aa9.82□□□□□ -0.84
PTPRF-213ENST00000481019 SDCBPO00560 298 aaPredicted RBP9.82□□□□□ -0.84
PTPRF-213ENST00000481019 NDUFB6O95139 128 aa9.82□□□□□ -0.84
PTPRF-213ENST00000481019 H2AFB2P0C5Z0 115 aa9.82□□□□□ -0.84
PTPRF-213ENST00000481019 OR5H8P0DN80 308 aa9.82□□□□□ -0.84
PTPRF-213ENST00000481019 S100GP29377 79 aa9.82□□□□□ -0.84
PTPRF-213ENST00000481019 ZNF134P52741 427 aa9.82□□□□□ -0.84
PTPRF-213ENST00000481019 HLA-DRB3P79483 266 aa9.82□□□□□ -0.84
PTPRF-213ENST00000481019 FOXL1Q12952 345 aa9.82□□□□□ -0.84
PTPRF-213ENST00000481019 SCGB2B2Q4G0G5 96 aa9.82□□□□□ -0.84
PTPRF-213ENST00000481019 TPTE2P1Q5T6R2 138 aa9.82□□□□□ -0.84
PTPRF-213ENST00000481019 PRR18Q8N4B5 295 aa9.82□□□□□ -0.84
PTPRF-213ENST00000481019 ZNF439Q8NDP4 499 aa9.82□□□□□ -0.84
PTPRF-213ENST00000481019 OR10V1Q8NGI7 309 aa9.82□□□□□ -0.84
PTPRF-213ENST00000481019 OR9G1Q8NH87 305 aa9.82□□□□□ -0.84
PTPRF-213ENST00000481019 OR10J5Q8NHC4 309 aa9.82□□□□□ -0.84
PTPRF-213ENST00000481019 ZFAND1Q8TCF1 268 aa9.82□□□□□ -0.84
PTPRF-213ENST00000481019 GINS4Q9BRT9 223 aa9.82□□□□□ -0.84
PTPRF-213ENST00000481019 TINAGL1Q9GZM7 467 aaPredicted RBP9.82□□□□□ -0.84
PTPRF-213ENST00000481019 ALX4Q9H161 411 aaPredicted RBP9.82□□□□□ -0.84
PTPRF-213ENST00000481019 MMP28Q9H239 520 aa9.82□□□□□ -0.84
PTPRF-213ENST00000481019 TAF9BQ9HBM6 251 aa9.82□□□□□ -0.84
PTPRF-213ENST00000481019 GFOD1Q9NXC2 390 aa9.82□□□□□ -0.84
PTPRF-213ENST00000481019 TCF19Q9Y242 345 aa9.82□□□□□ -0.84
PTPRF-213ENST00000481019 BTBD17A6NE02 478 aa9.81□□□□□ -0.84
PTPRF-213ENST00000481019 M0QYG6 137 aa9.81□□□□□ -0.84
PTPRF-213ENST00000481019 TOR1AO14656 332 aa9.81□□□□□ -0.84
PTPRF-213ENST00000481019 CRYBA1P05813 215 aa9.81□□□□□ -0.84
PTPRF-213ENST00000481019 ZBTB25P24278 435 aa9.81□□□□□ -0.84
PTPRF-213ENST00000481019 HERV-K104P61576 105 aa9.81□□□□□ -0.84
PTPRF-213ENST00000481019 HIST2H2BDQ6DRA6 164 aa9.81□□□□□ -0.84
PTPRF-213ENST00000481019 DHRS7BQ6IAN0 325 aaPredicted RBP9.81□□□□□ -0.84
PTPRF-213ENST00000481019 Q6ZS46 218 aa9.81□□□□□ -0.84
PTPRF-213ENST00000481019 OR10A7Q8NGE5 316 aa9.81□□□□□ -0.84
PTPRF-213ENST00000481019 OR52L2PQ8NGH6 319 aa9.81□□□□□ -0.84
PTPRF-213ENST00000481019 LINC01006Q8NI28 216 aa9.81□□□□□ -0.84
PTPRF-213ENST00000481019 ZNF596Q8TC21 504 aa9.81□□□□□ -0.84
PTPRF-213ENST00000481019 ZNF747Q9BV97 191 aa9.81□□□□□ -0.84
PTPRF-213ENST00000481019 GPN1Q9HCN4 374 aaPredicted RBP9.81□□□□□ -0.84
PTPRF-213ENST00000481019 NUDT15Q9NV35 164 aa9.81□□□□□ -0.84
PTPRF-213ENST00000481019 PIGBOS1A0A0B4J2F0 54 aa9.8□□□□□ -0.84
PTPRF-213ENST00000481019 LEUTXA8MZ59 168 aa9.8□□□□□ -0.84
PTPRF-213ENST00000481019 HSPA12AO43301 675 aa9.8□□□□□ -0.84
PTPRF-213ENST00000481019 PEX14O75381 377 aa9.8□□□□□ -0.84
PTPRF-213ENST00000481019 SLC22A5O76082 557 aa9.8□□□□□ -0.84
PTPRF-213ENST00000481019 RGS11O94810 467 aa9.8□□□□□ -0.84
PTPRF-213ENST00000481019 ZNF735P0CB33 412 aa9.8□□□□□ -0.84
PTPRF-213ENST00000481019 GSTT2P0CG29 244 aa9.8□□□□□ -0.84
PTPRF-213ENST00000481019 CCR6P51684 374 aa9.8□□□□□ -0.84
PTPRF-213ENST00000481019 DYNLT3P51808 116 aa9.8□□□□□ -0.84
PTPRF-213ENST00000481019 PRRX1P54821 245 aa9.8□□□□□ -0.84
PTPRF-213ENST00000481019 UCP3P55916 312 aa9.8□□□□□ -0.84
PTPRF-213ENST00000481019 TAS2R31P59538 309 aa9.8□□□□□ -0.84
PTPRF-213ENST00000481019 UBE2MP61081 183 aaKnown RBP9.8□□□□□ -0.84
PTPRF-213ENST00000481019 HTD2P86397 168 aa9.8□□□□□ -0.84
PTPRF-213ENST00000481019 HABP2Q14520 560 aaPredicted RBP9.8□□□□□ -0.84
PTPRF-213ENST00000481019 HMGN3Q15651 99 aa9.8□□□□□ -0.84
PTPRF-213ENST00000481019 CT45A1Q5HYN5 189 aa9.8□□□□□ -0.84
PTPRF-213ENST00000481019 C3orf56Q8N813 242 aa9.8□□□□□ -0.84
PTPRF-213ENST00000481019 OR52M1Q8NGK5 317 aa9.8□□□□□ -0.84
PTPRF-213ENST00000481019 CT45A3Q8NHU0 189 aa9.8□□□□□ -0.84
PTPRF-213ENST00000481019 CABLES2Q9BTV7 478 aa9.8□□□□□ -0.84
PTPRF-213ENST00000481019 PARP12Q9H0J9 701 aaKnown RBP9.8□□□□□ -0.84
PTPRF-213ENST00000481019 C20orf85Q9H1P6 137 aa9.8□□□□□ -0.84
PTPRF-213ENST00000481019 MMP24Q9Y5R2 645 aa9.8□□□□□ -0.84
PTPRF-213ENST00000481019 A0A1W2PPI3 338 aa9.79□□□□□ -0.84
PTPRF-213ENST00000481019 CLPSL1A2RUU4 121 aa9.79□□□□□ -0.84
PTPRF-213ENST00000481019 TIMM23O14925 209 aa9.79□□□□□ -0.84
PTPRF-213ENST00000481019 TSPAN9O75954 239 aa9.79□□□□□ -0.84
PTPRF-213ENST00000481019 RLN1P04808 185 aa9.79□□□□□ -0.84
PTPRF-213ENST00000481019 IL5P05113 134 aa9.79□□□□□ -0.84
PTPRF-213ENST00000481019 FCGR2CP31995 323 aa9.79□□□□□ -0.84
PTPRF-213ENST00000481019 BTCP35070 178 aa9.79□□□□□ -0.84
PTPRF-213ENST00000481019 PPP1CCP36873 323 aaKnown RBP9.79□□□□□ -0.84
PTPRF-213ENST00000481019 REG1BP48304 166 aa9.79□□□□□ -0.84
PTPRF-213ENST00000481019 MECP2P51608 486 aaKnown RBP9.79□□□□□ -0.84
PTPRF-213ENST00000481019 PROK1P58294 105 aa9.79□□□□□ -0.84
PTPRF-213ENST00000481019 RPL15P61313 204 aaKnown RBP9.79□□□□□ -0.84
PTPRF-213ENST00000481019 OR4D10Q8NGI6 311 aa9.79□□□□□ -0.84
PTPRF-213ENST00000481019 OR4F5Q8NH21 305 aa9.79□□□□□ -0.84
PTPRF-213ENST00000481019 WFDC12Q8WWY7 111 aa9.79□□□□□ -0.84
PTPRF-213ENST00000481019 EDARADDQ8WWZ3 215 aa9.79□□□□□ -0.84
PTPRF-213ENST00000481019 MAFIPQ8WZ33 124 aa9.79□□□□□ -0.84
PTPRF-213ENST00000481019 CFHR4Q92496 578 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms