RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 ALX4Q9H161 411 aaPredicted RBP8.32□□□□□ -1.08
VEGFA-212ENST00000480614 SH3BGRL3Q9H299 93 aa8.32□□□□□ -1.08
VEGFA-212ENST00000480614 CD1AP06126 327 aa8.32□□□□□ -1.08
VEGFA-212ENST00000480614 CKS2P33552 79 aa8.32□□□□□ -1.08
VEGFA-212ENST00000480614 CDX1P47902 265 aaPredicted RBP8.32□□□□□ -1.08
VEGFA-212ENST00000480614 MEF2BQ02080 365 aaPredicted RBP8.32□□□□□ -1.08
VEGFA-212ENST00000480614 ZNF658BQ4V348 819 aaPredicted RBP8.32□□□□□ -1.08
VEGFA-212ENST00000480614 TSPO2Q5TGU0 170 aa8.32□□□□□ -1.08
VEGFA-212ENST00000480614 VN1R4Q7Z5H5 301 aa8.32□□□□□ -1.08
VEGFA-212ENST00000480614 GVQW1Q8N7I0 195 aa8.32□□□□□ -1.08
VEGFA-212ENST00000480614 TINAGQ9UJW2 476 aa8.32□□□□□ -1.08
VEGFA-212ENST00000480614 FNDC1Q4ZHG4 1894 aaPredicted RBP8.32□□□□□ -1.08
VEGFA-212ENST00000480614 KBTBD11O94819 623 aa8.32□□□□□ -1.08
VEGFA-212ENST00000480614 FSTP19883 344 aa8.32□□□□□ -1.08
VEGFA-212ENST00000480614 PQLC2Q6ZP29 291 aa8.32□□□□□ -1.08
VEGFA-212ENST00000480614 OR52M1Q8NGK5 317 aa8.32□□□□□ -1.08
VEGFA-212ENST00000480614 C19orf24Q9BVV8 132 aa8.32□□□□□ -1.08
VEGFA-212ENST00000480614 SLC6A13Q9NSD5 602 aa8.32□□□□□ -1.08
VEGFA-212ENST00000480614 MGST3O14880 152 aa8.32□□□□□ -1.08
VEGFA-212ENST00000480614 ITGBL1O95965 494 aaPredicted RBP8.32□□□□□ -1.08
VEGFA-212ENST00000480614 PRSS8Q16651 343 aa8.32□□□□□ -1.08
VEGFA-212ENST00000480614 FAM106AQ4KMX7 169 aa8.32□□□□□ -1.08
VEGFA-212ENST00000480614 A0A1B0GTL3 188 aa8.32□□□□□ -1.08
VEGFA-212ENST00000480614 CDC42EP2O14613 210 aa8.32□□□□□ -1.08
VEGFA-212ENST00000480614 MDP1Q86V88 176 aa8.32□□□□□ -1.08
VEGFA-212ENST00000480614 MYEOVQ96EZ4 313 aa8.32□□□□□ -1.08
VEGFA-212ENST00000480614 PAM16Q9Y3D7 125 aa8.32□□□□□ -1.08
VEGFA-212ENST00000480614 GGTLC2Q14390 218 aa8.32□□□□□ -1.08
VEGFA-212ENST00000480614 SLC16A13Q7RTY0 426 aa8.32□□□□□ -1.08
VEGFA-212ENST00000480614 TMEM45BQ96B21 275 aa8.32□□□□□ -1.08
VEGFA-212ENST00000480614 SFXN3Q9BWM7 321 aa8.32□□□□□ -1.08
VEGFA-212ENST00000480614 UQCR10Q9UDW1 63 aa8.32□□□□□ -1.08
VEGFA-212ENST00000480614 AHRRA9YTQ3 701 aa8.32□□□□□ -1.08
VEGFA-212ENST00000480614 ARHGAP32A7KAX9 2087 aa8.32□□□□□ -1.08
VEGFA-212ENST00000480614 LSM10Q969L4 123 aaKnown RBP8.32□□□□□ -1.08
VEGFA-212ENST00000480614 TMEM140Q9NV12 185 aa8.32□□□□□ -1.08
VEGFA-212ENST00000480614 FAM181BA6NEQ2 426 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 CCL2P13500 99 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 LOXL3P58215 753 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 LILRA6Q6PI73 481 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 ELF5Q9UKW6 265 aaPredicted RBP8.31□□□□□ -1.08
VEGFA-212ENST00000480614 KCNAB3O43448 404 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 LRRC75AQ8NAA5 344 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 ALKBH7Q9BT30 221 aaPredicted RBP8.31□□□□□ -1.08
VEGFA-212ENST00000480614 HSPB7Q9UBY9 170 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 C7orf77A4D0Y5 90 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 AMY1AP04745 511 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 KIAA0040Q15053 153 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 PLPPR5Q32ZL2 321 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 C1orf185Q5T7R7 199 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 FAM90A10PA6NDY2 464 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 FAM90A18PA6NE21 464 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 FAM90A16PA6NEW6 464 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 FAM90A20PA6NIJ5 464 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 FAM90A8PA6NJQ4 464 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 FAM90A7PA6NKC0 464 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 FAM90A22PA8MWA6 464 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 FAM90A12PA8MX19 464 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 FAM90A5PA8MXJ8 464 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 FAM90A23PA8MXZ1 464 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 FAM90A15PP0C7V4 464 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 FAM90A13PP0C7W8 464 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 FAM90A14PP0C7W9 464 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 FAM90A24PP0C7X0 464 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 RPL27AP46776 148 aaKnown RBP8.31□□□□□ -1.08
VEGFA-212ENST00000480614 OR4A47Q6IF82 309 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 SOCS1O15524 211 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 AGFG2O95081 481 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 LGALS3P17931 250 aaKnown RBP8.31□□□□□ -1.08
VEGFA-212ENST00000480614 SIGLEC14Q08ET2 396 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 ZNF841Q6ZN19 808 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 LIMS2Q7Z4I7 341 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 WIPI2Q9Y4P8 454 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 RPS4XP62701 263 aaKnown RBP8.31□□□□□ -1.08
VEGFA-212ENST00000480614 RBFOX2O43251 390 aaKnown RBP eCLIP8.31□□□□□ -1.085e-9■□□□□ 10.6
VEGFA-212ENST00000480614 PAGE4O60829 102 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 MAGEA5P43359 124 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 ZFP36L2P47974 494 aaKnown RBP8.31□□□□□ -1.08
VEGFA-212ENST00000480614 EWSR1Q01844 656 aaKnown RBP eCLIP8.31□□□□□ -1.084e-7■■■□□ 17.4
VEGFA-212ENST00000480614 RELQ04864 619 aaPredicted RBP8.31□□□□□ -1.08
VEGFA-212ENST00000480614 PRELID3AQ96N28 172 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 KCNE5Q9UJ90 142 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 TNFSF18Q9UNG2 199 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 IGHV3-13P01766 116 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 IGHV3-7P01780 117 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 LHX8Q68G74 356 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 ABHD3Q8WU67 409 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 QTRT1Q9BXR0 403 aaKnown RBP8.31□□□□□ -1.08
VEGFA-212ENST00000480614 RCC2Q9P258 522 aaKnown RBP8.31□□□□□ -1.08
VEGFA-212ENST00000480614 SERGEFQ9UGK8 458 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 PRSS23O95084 383 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 PSMG4Q5JS54 123 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 DCAF10Q5QP82 559 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 LOXL4Q96JB6 756 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 KIR2DL4Q99706 377 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 GPA33Q99795 319 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 MRPL13Q9BYD1 178 aaKnown RBP8.31□□□□□ -1.08
VEGFA-212ENST00000480614 CCL28Q9NRJ3 127 aa8.31□□□□□ -1.08
VEGFA-212ENST00000480614 C9orf172C9J069 976 aa8.3□□□□□ -1.08
VEGFA-212ENST00000480614 NMUP48645 174 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms