RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 OR11H6Q8NGC7 330 aa14.31□□□□□ -0.12
UPF3A-206ENST00000480362 OR51H1Q8NH63 302 aa14.31□□□□□ -0.12
UPF3A-206ENST00000480362 MSI2Q96DH6 328 aaKnown RBP14.31□□□□□ -0.12
UPF3A-206ENST00000480362 GALNT14Q96FL9 552 aa14.31□□□□□ -0.12
UPF3A-206ENST00000480362 ZNF251Q9BRH9 671 aa14.31□□□□□ -0.12
UPF3A-206ENST00000480362 HIF1ANQ9NWT6 349 aa14.31□□□□□ -0.12
UPF3A-206ENST00000480362 ITGB1BP2Q9UKP3 347 aa14.31□□□□□ -0.12
UPF3A-206ENST00000480362 CENPEQ02224 2701 aa14.31□□□□□ -0.12
UPF3A-206ENST00000480362 RNASEK-C17orf49H0YIS7 233 aa14.3□□□□□ -0.12
UPF3A-206ENST00000480362 DUS4LO95620 317 aaKnown RBP14.3□□□□□ -0.12
UPF3A-206ENST00000480362 ARG1P05089 322 aa14.3□□□□□ -0.12
UPF3A-206ENST00000480362 OR5AC1P0C628 307 aa14.3□□□□□ -0.12
UPF3A-206ENST00000480362 ZNF16P17020 682 aaPredicted RBP14.3□□□□□ -0.12
UPF3A-206ENST00000480362 HOXB4P17483 251 aaPredicted RBP14.3□□□□□ -0.12
UPF3A-206ENST00000480362 F2RP25116 425 aa14.3□□□□□ -0.12
UPF3A-206ENST00000480362 GZMKP49863 264 aa14.3□□□□□ -0.12
UPF3A-206ENST00000480362 RPL30P62888 115 aaKnown RBP14.3□□□□□ -0.12
UPF3A-206ENST00000480362 NCR3LG1Q68D85 454 aa14.3□□□□□ -0.12
UPF3A-206ENST00000480362 PDZD9Q8IXQ8 264 aa14.3□□□□□ -0.12
UPF3A-206ENST00000480362 C12orf45Q8N5I9 185 aaPredicted RBP14.3□□□□□ -0.12
UPF3A-206ENST00000480362 BEND2Q8NDZ0 799 aa14.3□□□□□ -0.12
UPF3A-206ENST00000480362 TP53RKQ96S44 253 aa14.3□□□□□ -0.12
UPF3A-206ENST00000480362 S1PR3Q99500 378 aa14.3□□□□□ -0.12
UPF3A-206ENST00000480362 PRR13Q9NZ81 148 aa14.3□□□□□ -0.12
UPF3A-206ENST00000480362 PRRC2AP48634 2157 aaKnown RBP14.29□□□□□ -0.12
UPF3A-206ENST00000480362 NAV2Q8IVL1 2488 aa14.29□□□□□ -0.12
UPF3A-206ENST00000480362 A0A1W2PRD5 423 aa14.29□□□□□ -0.12
UPF3A-206ENST00000480362 A0A1W2PRF3 423 aa14.29□□□□□ -0.12
UPF3A-206ENST00000480362 A0A1W2PRM7 423 aa14.29□□□□□ -0.12
UPF3A-206ENST00000480362 RNF212BA8MTL3 300 aa14.29□□□□□ -0.12
UPF3A-206ENST00000480362 BUB1B-PAK6H3BSN5 160 aa14.29□□□□□ -0.12
UPF3A-206ENST00000480362 SSNA1O43805 119 aa14.29□□□□□ -0.12
UPF3A-206ENST00000480362 TGFAP01135 160 aa14.29□□□□□ -0.12
UPF3A-206ENST00000480362 ANXA3P12429 323 aa14.29□□□□□ -0.12
UPF3A-206ENST00000480362 GATA3P23771 443 aa14.29□□□□□ -0.12
UPF3A-206ENST00000480362 IL3RAP26951 378 aa14.29□□□□□ -0.12
UPF3A-206ENST00000480362 DUTP33316 252 aaKnown RBP14.29□□□□□ -0.12
UPF3A-206ENST00000480362 LINC00205P59089 165 aa14.29□□□□□ -0.12
UPF3A-206ENST00000480362 TMEM187Q14656 261 aa14.29□□□□□ -0.12
UPF3A-206ENST00000480362 ZNF833PQ6ZTB9 187 aa14.29□□□□□ -0.12
UPF3A-206ENST00000480362 DRAXINQ8NBI3 349 aaPredicted RBP14.29□□□□□ -0.12
UPF3A-206ENST00000480362 UXS1Q8NBZ7 420 aa14.29□□□□□ -0.12
UPF3A-206ENST00000480362 OR4P4Q8NGL7 312 aa14.29□□□□□ -0.12
UPF3A-206ENST00000480362 MITD1Q8WV92 249 aa14.29□□□□□ -0.12
UPF3A-206ENST00000480362 TCTEX1D2Q8WW35 142 aa14.29□□□□□ -0.12
UPF3A-206ENST00000480362 LHX4Q969G2 390 aa14.29□□□□□ -0.12
UPF3A-206ENST00000480362 HSD17B10Q99714 261 aaKnown RBP14.29□□□□□ -0.12
UPF3A-206ENST00000480362 MED28Q9H204 178 aa14.29□□□□□ -0.12
UPF3A-206ENST00000480362 AUP1Q9Y679 476 aa14.29□□□□□ -0.12
UPF3A-206ENST00000480362 CR1P17927 2039 aa14.29□□□□□ -0.12
UPF3A-206ENST00000480362 MED13LQ71F56 2210 aa14.29□□□□□ -0.12
UPF3A-206ENST00000480362 LINC00473A8K010 186 aa14.28□□□□□ -0.12
UPF3A-206ENST00000480362 H0Y980 276 aa14.28□□□□□ -0.12
UPF3A-206ENST00000480362 ZNF137PP52743 207 aa14.28□□□□□ -0.12
UPF3A-206ENST00000480362 RRAS2P62070 204 aaPredicted RBP14.28□□□□□ -0.12
UPF3A-206ENST00000480362 CATR1Q13166 79 aa14.28□□□□□ -0.12
UPF3A-206ENST00000480362 ANKRD55Q3KP44 614 aa14.28□□□□□ -0.12
UPF3A-206ENST00000480362 LIN54Q6MZP7 749 aa14.28□□□□□ -0.12
UPF3A-206ENST00000480362 CIARTQ8N365 385 aaPredicted RBP14.28□□□□□ -0.12
UPF3A-206ENST00000480362 COQ8AQ8NI60 647 aa14.28□□□□□ -0.12
UPF3A-206ENST00000480362 GLYATL2Q8WU03 294 aa14.28□□□□□ -0.12
UPF3A-206ENST00000480362 ST6GALNAC6Q969X2 333 aa14.28□□□□□ -0.12
UPF3A-206ENST00000480362 PHB2Q99623 299 aa14.28□□□□□ -0.12
UPF3A-206ENST00000480362 C7orf69Q9H7B7 122 aa14.28□□□□□ -0.12
UPF3A-206ENST00000480362 AMMECR1Q9Y4X0 333 aaPredicted RBP14.28□□□□□ -0.12
UPF3A-206ENST00000480362 ABCA2Q9BZC7 2435 aa14.27□□□□□ -0.12
UPF3A-206ENST00000480362 A0A0B4J2A0 478 aa14.27□□□□□ -0.13
UPF3A-206ENST00000480362 HMX3A6NHT5 357 aa14.27□□□□□ -0.13
UPF3A-206ENST00000480362 ODF3BA8MYP8 253 aa14.27□□□□□ -0.13
UPF3A-206ENST00000480362 SMAD7O15105 426 aaKnown RBP14.27□□□□□ -0.13
UPF3A-206ENST00000480362 UBE2E1P51965 193 aa14.27□□□□□ -0.13
UPF3A-206ENST00000480362 DIAPH2-AS1Q14236 149 aa14.27□□□□□ -0.13
UPF3A-206ENST00000480362 CYB5R2Q6BCY4 276 aa14.27□□□□□ -0.13
UPF3A-206ENST00000480362 LIAT1Q6ZQX7 453 aa14.27□□□□□ -0.13
UPF3A-206ENST00000480362 TMEM222Q9H0R3 208 aa14.27□□□□□ -0.13
UPF3A-206ENST00000480362 LIN7CQ9NUP9 197 aaKnown RBP14.27□□□□□ -0.13
UPF3A-206ENST00000480362 SHPKQ9UHJ6 478 aa14.27□□□□□ -0.13
UPF3A-206ENST00000480362 PDZD2O15018 2839 aa14.27□□□□□ -0.13
UPF3A-206ENST00000480362 HECTD1Q9ULT8 2610 aa14.26□□□□□ -0.13
UPF3A-206ENST00000480362 LY6LH3BQJ8 138 aa14.26□□□□□ -0.13
UPF3A-206ENST00000480362 B3GALNT1O75752 331 aa14.26□□□□□ -0.13
UPF3A-206ENST00000480362 CT45A6P0DMU7 189 aa14.26□□□□□ -0.13
UPF3A-206ENST00000480362 CT45A5P0DMU8 189 aa14.26□□□□□ -0.13
UPF3A-206ENST00000480362 CT45A7P0DMV0 189 aa14.26□□□□□ -0.13
UPF3A-206ENST00000480362 UCP1P25874 307 aa14.26□□□□□ -0.13
UPF3A-206ENST00000480362 HTR1DP28221 377 aa14.26□□□□□ -0.13
UPF3A-206ENST00000480362 REG1BP48304 166 aa14.26□□□□□ -0.13
UPF3A-206ENST00000480362 THBS3P49746 956 aa14.26□□□□□ -0.13
UPF3A-206ENST00000480362 FCN2Q15485 313 aa14.26□□□□□ -0.13
UPF3A-206ENST00000480362 OR2B11Q5JQS5 317 aa14.26□□□□□ -0.13
UPF3A-206ENST00000480362 FAM71F2Q6NXP2 309 aa14.26□□□□□ -0.13
UPF3A-206ENST00000480362 ZNF383Q8NA42 475 aa14.26□□□□□ -0.13
UPF3A-206ENST00000480362 UNC79Q9P2D8 2635 aa14.25□□□□□ -0.13
UPF3A-206ENST00000480362 CENPVL3A0A0U1RRI6 287 aa14.25□□□□□ -0.13
UPF3A-206ENST00000480362 LEUTXA8MZ59 168 aa14.25□□□□□ -0.13
UPF3A-206ENST00000480362 GAPDHP04406 335 aaKnown RBP14.25□□□□□ -0.13
UPF3A-206ENST00000480362 LGALS4P56470 323 aa14.25□□□□□ -0.13
UPF3A-206ENST00000480362 BRWD1-AS2P59051 145 aa14.25□□□□□ -0.13
UPF3A-206ENST00000480362 C2orf68Q2NKX9 166 aa14.25□□□□□ -0.13
UPF3A-206ENST00000480362 ZNF585BQ52M93 769 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms