RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 SPOCK3Q9BQ16 436 aa9.08□□□□□ -0.96
VTI1A-204ENST00000480057 C11orf1Q9H5F2 150 aa9.08□□□□□ -0.96
VTI1A-204ENST00000480057 CHODLQ9H9P2 273 aa9.08□□□□□ -0.96
VTI1A-204ENST00000480057 C19orf12Q9NSK7 152 aa9.08□□□□□ -0.96
VTI1A-204ENST00000480057 RALYQ9UKM9 306 aaKnown RBP9.08□□□□□ -0.96
VTI1A-204ENST00000480057 LSM5Q9Y4Y9 91 aaKnown RBP9.08□□□□□ -0.96
VTI1A-204ENST00000480057 MMP24Q9Y5R2 645 aa9.08□□□□□ -0.96
VTI1A-204ENST00000480057 A0A087X0M5 115 aa9.07□□□□□ -0.96
VTI1A-204ENST00000480057 A0A1B0GX30 115 aa9.07□□□□□ -0.96
VTI1A-204ENST00000480057 FAM90A9PA6NNJ1 464 aa9.07□□□□□ -0.96
VTI1A-204ENST00000480057 GPR137BO60478 399 aa9.07□□□□□ -0.96
VTI1A-204ENST00000480057 FCN3O75636 299 aa9.07□□□□□ -0.96
VTI1A-204ENST00000480057 SCGB1D2O95969 90 aa9.07□□□□□ -0.96
VTI1A-204ENST00000480057 IGKV1-5P01602 117 aa9.07□□□□□ -0.96
VTI1A-204ENST00000480057 RBP4P02753 201 aa9.07□□□□□ -0.96
VTI1A-204ENST00000480057 P0C879 139 aa9.07□□□□□ -0.96
VTI1A-204ENST00000480057 HKR1P10072 659 aa9.07□□□□□ -0.96
VTI1A-204ENST00000480057 ZNF16P17020 682 aaPredicted RBP9.07□□□□□ -0.96
VTI1A-204ENST00000480057 RPL12P30050 165 aaKnown RBP9.07□□□□□ -0.96
VTI1A-204ENST00000480057 THBS3P49746 956 aa9.07□□□□□ -0.96
VTI1A-204ENST00000480057 AKR1C2P52895 323 aa9.07□□□□□ -0.96
VTI1A-204ENST00000480057 TMEM33P57088 247 aa9.07□□□□□ -0.96
VTI1A-204ENST00000480057 RPL30P62888 115 aaKnown RBP9.07□□□□□ -0.96
VTI1A-204ENST00000480057 ZNF273Q14593 569 aa9.07□□□□□ -0.96
VTI1A-204ENST00000480057 LTC4SQ16873 150 aa9.07□□□□□ -0.96
VTI1A-204ENST00000480057 CT45A1Q5HYN5 189 aa9.07□□□□□ -0.96
VTI1A-204ENST00000480057 CLLU1Q5K131 121 aa9.07□□□□□ -0.96
VTI1A-204ENST00000480057 FAM53AQ6NSI3 398 aaPredicted RBP9.07□□□□□ -0.96
VTI1A-204ENST00000480057 FAM71F2Q6NXP2 309 aa9.07□□□□□ -0.96
VTI1A-204ENST00000480057 SLC25A48Q6ZT89 311 aaKnown RBP9.07□□□□□ -0.96
VTI1A-204ENST00000480057 SPAG16Q8N0X2 631 aa9.07□□□□□ -0.96
VTI1A-204ENST00000480057 LINC00311Q8N616 119 aa9.07□□□□□ -0.96
VTI1A-204ENST00000480057 DMBX1Q8NFW5 382 aa9.07□□□□□ -0.96
VTI1A-204ENST00000480057 OR8B3Q8NGG8 313 aa9.07□□□□□ -0.96
VTI1A-204ENST00000480057 CT45A3Q8NHU0 189 aa9.07□□□□□ -0.96
VTI1A-204ENST00000480057 RNASE11Q8TAA1 199 aaKnown RBP9.07□□□□□ -0.96
VTI1A-204ENST00000480057 C8orf46Q8TAG6 207 aa9.07□□□□□ -0.96
VTI1A-204ENST00000480057 SCARB1Q8WTV0 552 aa9.07□□□□□ -0.96
VTI1A-204ENST00000480057 NEIL1Q96FI4 390 aaPredicted RBP9.07□□□□□ -0.96
VTI1A-204ENST00000480057 OR8B2Q96RD0 313 aa9.07□□□□□ -0.96
VTI1A-204ENST00000480057 CACFD1Q9UGQ2 172 aa9.07□□□□□ -0.96
VTI1A-204ENST00000480057 PRELID3BQ9Y3B1 194 aa9.07□□□□□ -0.96
VTI1A-204ENST00000480057 TPRP12270 2363 aaKnown RBP9.07□□□□□ -0.96
VTI1A-204ENST00000480057 A0A1W2PPR1 153 aa9.06□□□□□ -0.96
VTI1A-204ENST00000480057 C17orf98A8MV24 154 aa9.06□□□□□ -0.96
VTI1A-204ENST00000480057 PROP1O75360 226 aa9.06□□□□□ -0.96
VTI1A-204ENST00000480057 HPRT1P00492 218 aa9.06□□□□□ -0.96
VTI1A-204ENST00000480057 CFDP00746 253 aaPredicted RBP9.06□□□□□ -0.96
VTI1A-204ENST00000480057 GAPDHP04406 335 aaKnown RBP9.06□□□□□ -0.96
VTI1A-204ENST00000480057 TPT1P13693 172 aaKnown RBP9.06□□□□□ -0.96
VTI1A-204ENST00000480057 OMGP23515 440 aa9.06□□□□□ -0.96
VTI1A-204ENST00000480057 ZNF134P52741 427 aa9.06□□□□□ -0.96
VTI1A-204ENST00000480057 DLX6P56179 175 aa9.06□□□□□ -0.96
VTI1A-204ENST00000480057 RAB14P61106 215 aa9.06□□□□□ -0.96
VTI1A-204ENST00000480057 TAGLNQ01995 201 aaKnown RBP9.06□□□□□ -0.96
VTI1A-204ENST00000480057 TLE4Q04727 773 aa9.06□□□□□ -0.96
VTI1A-204ENST00000480057 PRAMEF5Q5TYX0 476 aa9.06□□□□□ -0.96
VTI1A-204ENST00000480057 ZNF841Q6ZN19 808 aa9.06□□□□□ -0.96
VTI1A-204ENST00000480057 FGFRL1Q8N441 504 aa9.06□□□□□ -0.96
VTI1A-204ENST00000480057 ZNF843Q8N446 348 aa9.06□□□□□ -0.96
VTI1A-204ENST00000480057 ST8SIA2Q92186 375 aa9.06□□□□□ -0.96
VTI1A-204ENST00000480057 H1FXQ92522 213 aaKnown RBP9.06□□□□□ -0.96
VTI1A-204ENST00000480057 TNFRSF14Q92956 283 aa9.06□□□□□ -0.96
VTI1A-204ENST00000480057 RAB40CQ96S21 281 aa9.06□□□□□ -0.96
VTI1A-204ENST00000480057 GSX2Q9BZM3 304 aa9.06□□□□□ -0.96
VTI1A-204ENST00000480057 SLC25A31Q9H0C2 315 aa9.06□□□□□ -0.96
VTI1A-204ENST00000480057 RCL1Q9Y2P8 373 aaKnown RBP9.06□□□□□ -0.96
VTI1A-204ENST00000480057 A0A0G2JRQ6 117 aa9.05□□□□□ -0.96
VTI1A-204ENST00000480057 MSGN1A6NI15 193 aa9.05□□□□□ -0.96
VTI1A-204ENST00000480057 LINC00473A8K010 186 aa9.05□□□□□ -0.96
VTI1A-204ENST00000480057 F5H0A9 414 aaPredicted RBP9.05□□□□□ -0.96
VTI1A-204ENST00000480057 M0R1X1 148 aa9.05□□□□□ -0.96
VTI1A-204ENST00000480057 TOR1AO14656 332 aa9.05□□□□□ -0.96
VTI1A-204ENST00000480057 SLC31A2O15432 143 aa9.05□□□□□ -0.96
VTI1A-204ENST00000480057 ATP6V1G1O75348 118 aa9.05□□□□□ -0.96
VTI1A-204ENST00000480057 LY86O95711 162 aa9.05□□□□□ -0.96
VTI1A-204ENST00000480057 F12P00748 615 aaPredicted RBP9.05□□□□□ -0.96
VTI1A-204ENST00000480057 NFYBP25208 207 aa9.05□□□□□ -0.96
VTI1A-204ENST00000480057 HTR2BP41595 481 aa9.05□□□□□ -0.96
VTI1A-204ENST00000480057 EFNA4P52798 201 aa9.05□□□□□ -0.96
VTI1A-204ENST00000480057 BRWD1-AS2P59051 145 aa9.05□□□□□ -0.96
VTI1A-204ENST00000480057 TAS2R30P59541 319 aa9.05□□□□□ -0.96
VTI1A-204ENST00000480057 VAMP2P63027 116 aa9.05□□□□□ -0.96
VTI1A-204ENST00000480057 BTNL3Q6UXE8 466 aa9.05□□□□□ -0.96
VTI1A-204ENST00000480057 FOXRED2Q8IWF2 684 aa9.05□□□□□ -0.96
VTI1A-204ENST00000480057 ODF3L1Q8IXM7 274 aa9.05□□□□□ -0.96
VTI1A-204ENST00000480057 DDB2Q92466 427 aa9.05□□□□□ -0.96
VTI1A-204ENST00000480057 BBC3Q96PG8 261 aaPredicted RBP9.05□□□□□ -0.96
VTI1A-204ENST00000480057 S1PR3Q99500 378 aa9.05□□□□□ -0.96
VTI1A-204ENST00000480057 ZNF251Q9BRH9 671 aa9.05□□□□□ -0.96
VTI1A-204ENST00000480057 ZNF471Q9BX82 626 aaPredicted RBP9.05□□□□□ -0.96
VTI1A-204ENST00000480057 UBTD1Q9HAC8 227 aa9.05□□□□□ -0.96
VTI1A-204ENST00000480057 LYRM2Q9NU23 88 aaPredicted RBP9.05□□□□□ -0.96
VTI1A-204ENST00000480057 CACNG5Q9UF02 275 aa9.05□□□□□ -0.96
VTI1A-204ENST00000480057 NBASA2RRP1 2371 aa9.05□□□□□ -0.96
VTI1A-204ENST00000480057 SAA2-SAA4A0A096LPE2 208 aa9.04□□□□□ -0.96
VTI1A-204ENST00000480057 hCG_1809904A0A1W2PP81 198 aa9.04□□□□□ -0.96
VTI1A-204ENST00000480057 A0A1W2PPE2 198 aa9.04□□□□□ -0.96
VTI1A-204ENST00000480057 A0A1W2PR64 198 aa9.04□□□□□ -0.96
VTI1A-204ENST00000480057 A0A1W2PRV1 198 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms