RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 PRDM14Q9GZV8 571 aa17.51■□□□□ 0.39
COL13A1-208ENST00000479733 MANBALQ9NQG1 85 aa17.51■□□□□ 0.39
COL13A1-208ENST00000479733 FSCN3Q9NQT6 498 aa17.51■□□□□ 0.39
COL13A1-208ENST00000479733 TRAPPC2LQ9UL33 140 aa17.51■□□□□ 0.39
COL13A1-208ENST00000479733 RAMP3O60896 148 aa17.51■□□□□ 0.39
COL13A1-208ENST00000479733 HPRT1P00492 218 aa17.51■□□□□ 0.39
COL13A1-208ENST00000479733 NPSP0C0P6 89 aa17.51■□□□□ 0.39
COL13A1-208ENST00000479733 SRP14P37108 136 aaKnown RBP17.51■□□□□ 0.39
COL13A1-208ENST00000479733 ZNF816Q0VGE8 651 aaPredicted RBP17.51■□□□□ 0.39
COL13A1-208ENST00000479733 TMEM208Q9BTX3 173 aa17.51■□□□□ 0.39
COL13A1-208ENST00000479733 NBEAQ8NFP9 2946 aa17.51■□□□□ 0.39
COL13A1-208ENST00000479733 RAB4AP20338 218 aa17.5■□□□□ 0.39
COL13A1-208ENST00000479733 FAM53AQ6NSI3 398 aaPredicted RBP17.5■□□□□ 0.39
COL13A1-208ENST00000479733 DCAF16Q9NXF7 216 aa17.5■□□□□ 0.39
COL13A1-208ENST00000479733 DEGS1O15121 323 aa17.5■□□□□ 0.39
COL13A1-208ENST00000479733 RBMXL2O75526 392 aaKnown RBP17.5■□□□□ 0.39
COL13A1-208ENST00000479733 NDUFB4O95168 129 aa17.5■□□□□ 0.39
COL13A1-208ENST00000479733 GCSAMLQ5JQS6 135 aa17.5■□□□□ 0.39
COL13A1-208ENST00000479733 OR1L1Q8NH94 360 aa17.5■□□□□ 0.39
COL13A1-208ENST00000479733 ZDHHC16Q969W1 377 aa17.5■□□□□ 0.39
COL13A1-208ENST00000479733 RIMS4Q9H426 269 aaPredicted RBP17.5■□□□□ 0.39
COL13A1-208ENST00000479733 ADAMTS20P59510 1910 aa17.5■□□□□ 0.39
COL13A1-208ENST00000479733 DMDP11532 3685 aa17.49■□□□□ 0.39
COL13A1-208ENST00000479733 UMODP07911 640 aa17.49■□□□□ 0.39
COL13A1-208ENST00000479733 OR10J1P30954 320 aa17.49■□□□□ 0.39
COL13A1-208ENST00000479733 ATP5G3P48201 142 aa17.49■□□□□ 0.39
COL13A1-208ENST00000479733 PPP1CBP62140 327 aa17.49■□□□□ 0.39
COL13A1-208ENST00000479733 FAM58AQ8N1B3 248 aa17.49■□□□□ 0.39
COL13A1-208ENST00000479733 ZNF114Q8NC26 417 aa17.49■□□□□ 0.39
COL13A1-208ENST00000479733 ZNF503-AS2A6NEH8 195 aa17.49■□□□□ 0.39
COL13A1-208ENST00000479733 TMEM14EPQ6UXP3 125 aa17.49■□□□□ 0.39
COL13A1-208ENST00000479733 LINC01551Q86U37 167 aa17.49■□□□□ 0.39
COL13A1-208ENST00000479733 ZNF808Q8N4W9 903 aaPredicted RBP17.49■□□□□ 0.39
COL13A1-208ENST00000479733 SGMS2Q8NHU3 365 aa17.49■□□□□ 0.39
COL13A1-208ENST00000479733 PATZ1Q9HBE1 687 aaKnown RBP17.49■□□□□ 0.39
COL13A1-208ENST00000479733 LIN7CQ9NUP9 197 aaKnown RBP17.49■□□□□ 0.39
COL13A1-208ENST00000479733 TYMSP04818 313 aa17.48■□□□□ 0.39
COL13A1-208ENST00000479733 COX6A1P12074 109 aa17.48■□□□□ 0.39
COL13A1-208ENST00000479733 IRF2P14316 349 aa17.48■□□□□ 0.39
COL13A1-208ENST00000479733 COX5AP20674 150 aa17.48■□□□□ 0.39
COL13A1-208ENST00000479733 OR3A1P47881 315 aa17.48■□□□□ 0.39
COL13A1-208ENST00000479733 DRAM1Q8N682 238 aa17.48■□□□□ 0.39
COL13A1-208ENST00000479733 ZNF709Q8N972 641 aa17.48■□□□□ 0.39
COL13A1-208ENST00000479733 IMMP1LQ96LU5 166 aa17.48■□□□□ 0.39
COL13A1-208ENST00000479733 IMMP2LQ96T52 175 aa17.48■□□□□ 0.39
COL13A1-208ENST00000479733 PARD6AQ9NPB6 346 aa17.48■□□□□ 0.39
COL13A1-208ENST00000479733 PRDM6Q9NQX0 595 aa17.48■□□□□ 0.39
COL13A1-208ENST00000479733 GOLT1BQ9Y3E0 138 aa17.48■□□□□ 0.39
COL13A1-208ENST00000479733 TMEM210A6NLX4 147 aa17.48■□□□□ 0.39
COL13A1-208ENST00000479733 RPL15P61313 204 aaKnown RBP17.48■□□□□ 0.39
COL13A1-208ENST00000479733 COLCA1Q6ZS62 124 aa17.48■□□□□ 0.39
COL13A1-208ENST00000479733 OR5A2Q8NGI9 324 aa17.48■□□□□ 0.39
COL13A1-208ENST00000479733 PAM16Q9Y3D7 125 aa17.48■□□□□ 0.39
COL13A1-208ENST00000479733 TRAV38-1A0A0B4J264 116 aa17.48■□□□□ 0.39
COL13A1-208ENST00000479733 ZG16O60844 167 aa17.48■□□□□ 0.39
COL13A1-208ENST00000479733 MRPL33O75394 65 aaKnown RBP17.48■□□□□ 0.39
COL13A1-208ENST00000479733 SAXO1Q8IYX7 474 aa17.48■□□□□ 0.39
COL13A1-208ENST00000479733 TOX3O15405 576 aaPredicted RBP17.47■□□□□ 0.39
COL13A1-208ENST00000479733 GNB1P62873 340 aa17.47■□□□□ 0.39
COL13A1-208ENST00000479733 OR10P1Q8NGE3 313 aa17.47■□□□□ 0.39
COL13A1-208ENST00000479733 KIR2DL5BA0A0G2JN68 375 aa17.47■□□□□ 0.39
COL13A1-208ENST00000479733 KIR2DL5BA0A0G2JPC4 375 aa17.47■□□□□ 0.39
COL13A1-208ENST00000479733 ADMP35318 185 aa17.47■□□□□ 0.39
COL13A1-208ENST00000479733 SPATA46Q5T0L3 261 aa17.47■□□□□ 0.39
COL13A1-208ENST00000479733 KIR2DL5AQ8N109 375 aa17.47■□□□□ 0.39
COL13A1-208ENST00000479733 WDYHV1Q96HA8 205 aa17.47■□□□□ 0.39
COL13A1-208ENST00000479733 TMEM147Q9BVK8 224 aa17.47■□□□□ 0.39
COL13A1-208ENST00000479733 P04436 131 aa17.46■□□□□ 0.39
COL13A1-208ENST00000479733 RIPPLY2Q5TAB7 128 aa17.46■□□□□ 0.39
COL13A1-208ENST00000479733 CMTM2Q8TAZ6 248 aa17.46■□□□□ 0.39
COL13A1-208ENST00000479733 NPCDR1Q9BY65 106 aa17.46■□□□□ 0.39
COL13A1-208ENST00000479733 PXMP4Q9Y6I8 212 aa17.46■□□□□ 0.39
COL13A1-208ENST00000479733 KIAA1549Q9HCM3 1950 aa17.46■□□□□ 0.39
COL13A1-208ENST00000479733 RPLP1P05386 114 aaKnown RBP17.46■□□□□ 0.39
COL13A1-208ENST00000479733 CA6P23280 308 aa17.46■□□□□ 0.39
COL13A1-208ENST00000479733 THBS3P49746 956 aa17.46■□□□□ 0.39
COL13A1-208ENST00000479733 ZCCHC14Q8WYQ9 949 aaKnown RBP17.46■□□□□ 0.39
COL13A1-208ENST00000479733 MSL2Q9HCI7 577 aa17.46■□□□□ 0.39
COL13A1-208ENST00000479733 TIMM9Q9Y5J7 89 aa17.46■□□□□ 0.39
COL13A1-208ENST00000479733 MARCH11A6NNE9 402 aa17.45■□□□□ 0.38
COL13A1-208ENST00000479733 MCEMP1Q8IX19 187 aa17.45■□□□□ 0.38
COL13A1-208ENST00000479733 CACNA1EQ15878 2313 aa17.45■□□□□ 0.38
COL13A1-208ENST00000479733 RBFOX2O43251 390 aaKnown RBP eCLIP17.45■□□□□ 0.38
COL13A1-208ENST00000479733 DLEU1O43261 78 aa17.45■□□□□ 0.38
COL13A1-208ENST00000479733 SRD5A2P31213 254 aa17.45■□□□□ 0.38
COL13A1-208ENST00000479733 DCAF10Q5QP82 559 aa17.45■□□□□ 0.38
COL13A1-208ENST00000479733 NUFIP2Q7Z417 695 aaKnown RBP17.45■□□□□ 0.38
COL13A1-208ENST00000479733 ZDHHC11Q9H8X9 412 aa17.45■□□□□ 0.38
COL13A1-208ENST00000479733 PIGBOS1A0A0B4J2F0 54 aa17.44■□□□□ 0.38
COL13A1-208ENST00000479733 VENTXO95231 258 aa17.44■□□□□ 0.38
COL13A1-208ENST00000479733 CDC34P49427 236 aaPredicted RBP17.44■□□□□ 0.38
COL13A1-208ENST00000479733 LINC00205P59089 165 aa17.44■□□□□ 0.38
COL13A1-208ENST00000479733 LCN2P80188 198 aa17.44■□□□□ 0.38
COL13A1-208ENST00000479733 VASH2Q86V25 355 aa17.44■□□□□ 0.38
COL13A1-208ENST00000479733 MED12LQ86YW9 2145 aa17.44■□□□□ 0.38
COL13A1-208ENST00000479733 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.44■□□□□ 0.38
COL13A1-208ENST00000479733 EDDM3BP56851 147 aa17.44■□□□□ 0.38
COL13A1-208ENST00000479733 Q6ZWC4 215 aa17.44■□□□□ 0.38
COL13A1-208ENST00000479733 PARD6GQ9BYG4 376 aaPredicted RBP17.44■□□□□ 0.38
COL13A1-208ENST00000479733 SH2D2AQ9NP31 389 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms