RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 ZNF75AQ96N20 296 aa3.65□□□□□ -1.83
UPF3A-205ENST00000479712 GPX7Q96SL4 187 aaPredicted RBP3.65□□□□□ -1.83
UPF3A-205ENST00000479712 KCNS3Q9BQ31 491 aa3.65□□□□□ -1.83
UPF3A-205ENST00000479712 ULBP2Q9BZM5 246 aa3.65□□□□□ -1.83
UPF3A-205ENST00000479712 TXNIPQ9H3M7 391 aa3.65□□□□□ -1.83
UPF3A-205ENST00000479712 NMNAT1Q9HAN9 279 aaPredicted RBP3.65□□□□□ -1.83
UPF3A-205ENST00000479712 NEK6Q9HC98 313 aa3.65□□□□□ -1.83
UPF3A-205ENST00000479712 INIPQ9NRY2 104 aa3.65□□□□□ -1.83
UPF3A-205ENST00000479712 CALYQ9NYX4 217 aa3.65□□□□□ -1.83
UPF3A-205ENST00000479712 CRCT1Q9UGL9 99 aa3.65□□□□□ -1.83
UPF3A-205ENST00000479712 POFUT2Q9Y2G5 429 aa3.65□□□□□ -1.83
UPF3A-205ENST00000479712 FAM32AQ9Y421 112 aaKnown RBP3.65□□□□□ -1.83
UPF3A-205ENST00000479712 FSIP2Q5CZC0 6907 aa3.65□□□□□ -1.83
UPF3A-205ENST00000479712 A0A087WUU8 490 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 IGHV2OR16-5A0A0B4J2B6 119 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 A0A0G2JLM5 398 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 C12orf71A8MTZ7 269 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 EFCAB9A8MZ26 197 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 LRRN3E7EW58 273 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 ATP6V1G2-DDX39BF2Z307 99 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 H3BSA7 217 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 M0R1B8 84 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 M0R3G1 203 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 PPP1R2P9O14990 202 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 SNAP29O95721 258 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 RAB36O95755 333 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 ZNF682O95780 498 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 PTHP01270 115 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 SERPINA5P05154 406 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 CD14P08571 375 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 OR8G3PP0DMU2 310 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 IFI30P13284 250 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 ZNF35P13682 527 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 ZNF14P17017 642 aaPredicted RBP3.64□□□□□ -1.83
UPF3A-205ENST00000479712 GALP22466 123 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 TUBG1P23258 451 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 GLRXP35754 106 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 IFNGR2P38484 337 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 AQP2P41181 271 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 MAGEA2P43356 314 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 PPOXP50336 477 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 ZNF79Q15937 498 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 SLC36A2Q495M3 483 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 ZBED5Q49AG3 693 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 SPANXN2Q5MJ10 180 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 THEM4Q5T1C6 240 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 C9orf135Q5VTT2 229 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 OTPQ5XKR4 325 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 LCN8Q6JVE9 175 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 TMEM53Q6P2H8 277 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 IL34Q6ZMJ4 242 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 VTCN1Q7Z7D3 282 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 OAFQ86UD1 273 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 SBSPONQ8IVN8 264 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 SLC22A24Q8N4F4 322 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 LRRC75AQ8NAA5 344 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 PFN4Q8NHR9 129 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 SLC7A13Q8TCU3 470 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 MCUR1Q96AQ8 359 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 PHYHIPLQ96FC7 376 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 PYURFQ96I23 114 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 RBP7Q96R05 134 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 EMC6Q9BV81 110 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 CHID1Q9BWS9 393 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 FAM107BQ9H098 131 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 TUBG2Q9NRH3 451 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 CA10Q9NS85 328 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 TMEM38BQ9NVV0 291 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 ADA2Q9NZK5 511 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 ATPIF1Q9UII2 106 aa3.64□□□□□ -1.83
UPF3A-205ENST00000479712 VPS13DQ5THJ4 4388 aa3.63□□□□□ -1.83
UPF3A-205ENST00000479712 KPNA4O00629 521 aaPredicted RBP3.63□□□□□ -1.83
UPF3A-205ENST00000479712 NDUFB2O95178 105 aa3.63□□□□□ -1.83
UPF3A-205ENST00000479712 HLA-HP01893 362 aa3.63□□□□□ -1.83
UPF3A-205ENST00000479712 FABP3P05413 133 aa3.63□□□□□ -1.83
UPF3A-205ENST00000479712 ERCC1P07992 297 aaPredicted RBP3.63□□□□□ -1.83
UPF3A-205ENST00000479712 CST2P09228 141 aa3.63□□□□□ -1.83
UPF3A-205ENST00000479712 MMP7P09237 267 aaPredicted RBP3.63□□□□□ -1.83
UPF3A-205ENST00000479712 CHTF8P0CG12 524 aa3.63□□□□□ -1.83
UPF3A-205ENST00000479712 COX5BP10606 129 aa3.63□□□□□ -1.83
UPF3A-205ENST00000479712 BTCP35070 178 aa3.63□□□□□ -1.83
UPF3A-205ENST00000479712 OMPP47874 163 aa3.63□□□□□ -1.83
UPF3A-205ENST00000479712 NPBWR2P48146 333 aa3.63□□□□□ -1.83
UPF3A-205ENST00000479712 IDH3GP51553 393 aaPredicted RBP3.63□□□□□ -1.83
UPF3A-205ENST00000479712 PCBD1P61457 104 aa3.63□□□□□ -1.83
UPF3A-205ENST00000479712 LYZP61626 148 aa3.63□□□□□ -1.83
UPF3A-205ENST00000479712 SNRPD2P62316 118 aaKnown RBP3.63□□□□□ -1.83
UPF3A-205ENST00000479712 MOGQ16653 247 aa3.63□□□□□ -1.83
UPF3A-205ENST00000479712 FAM27BQ5VT28 67 aa3.63□□□□□ -1.83
UPF3A-205ENST00000479712 KRTAP5-4Q6L8H1 288 aa3.63□□□□□ -1.83
UPF3A-205ENST00000479712 RPL13AP3Q6NVV1 102 aa3.63□□□□□ -1.83
UPF3A-205ENST00000479712 FAM122BQ7Z309 247 aa3.63□□□□□ -1.83
UPF3A-205ENST00000479712 MDP1Q86V88 176 aa3.63□□□□□ -1.83
UPF3A-205ENST00000479712 DEFB107AQ8IZN7 70 aa3.63□□□□□ -1.83
UPF3A-205ENST00000479712 PUSL1Q8N0Z8 303 aaKnown RBP3.63□□□□□ -1.83
UPF3A-205ENST00000479712 MS4A15Q8N5U1 240 aa3.63□□□□□ -1.83
UPF3A-205ENST00000479712 CLDN22Q8N7P3 220 aa3.63□□□□□ -1.83
UPF3A-205ENST00000479712 C20orf203Q8NBC4 194 aa3.63□□□□□ -1.83
UPF3A-205ENST00000479712 OR4K5Q8NGD3 323 aa3.63□□□□□ -1.83
UPF3A-205ENST00000479712 FAM81AQ8TBF8 368 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms