RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 TRAT1Q6PIZ9 186 aa7.24□□□□□ -1.25
GPNMB-211ENST00000479625 KCTD20Q7Z5Y7 419 aa7.24□□□□□ -1.25
GPNMB-211ENST00000479625 OR8J1Q8NGP2 316 aa7.24□□□□□ -1.25
GPNMB-211ENST00000479625 OR5AK2Q8NH90 309 aa7.24□□□□□ -1.25
GPNMB-211ENST00000479625 MRPL30Q8TCC3 161 aaKnown RBP7.24□□□□□ -1.25
GPNMB-211ENST00000479625 PHLDA1Q8WV24 401 aaPredicted RBP7.24□□□□□ -1.25
GPNMB-211ENST00000479625 CACNG8Q8WXS5 425 aa7.24□□□□□ -1.25
GPNMB-211ENST00000479625 RFKQ969G6 155 aa7.24□□□□□ -1.25
GPNMB-211ENST00000479625 ABHD14BQ96IU4 210 aa7.24□□□□□ -1.25
GPNMB-211ENST00000479625 ALG8Q9BVK2 526 aa7.24□□□□□ -1.25
GPNMB-211ENST00000479625 TINAGL1Q9GZM7 467 aaPredicted RBP7.24□□□□□ -1.25
GPNMB-211ENST00000479625 RIBC2Q9H4K1 309 aa7.24□□□□□ -1.25
GPNMB-211ENST00000479625 ZC4H2Q9NQZ6 224 aa7.24□□□□□ -1.25
GPNMB-211ENST00000479625 WASHC3Q9Y3C0 194 aa7.24□□□□□ -1.25
GPNMB-211ENST00000479625 PEX16Q9Y5Y5 336 aa7.24□□□□□ -1.25
GPNMB-211ENST00000479625 LOC102724200A0A096LPH7 203 aaPredicted RBP7.23□□□□□ -1.25
GPNMB-211ENST00000479625 A0A1B0GVY2 172 aa7.23□□□□□ -1.25
GPNMB-211ENST00000479625 TCRBV3S1A0A5B6 114 aa7.23□□□□□ -1.25
GPNMB-211ENST00000479625 TMEM212A6NML5 194 aa7.23□□□□□ -1.25
GPNMB-211ENST00000479625 G3V2T6 193 aa7.23□□□□□ -1.25
GPNMB-211ENST00000479625 SLC22A1O15245 554 aa7.23□□□□□ -1.25
GPNMB-211ENST00000479625 YPEL1O60688 119 aa7.23□□□□□ -1.25
GPNMB-211ENST00000479625 SC5DO75845 299 aa7.23□□□□□ -1.25
GPNMB-211ENST00000479625 DCTN3O75935 186 aa7.23□□□□□ -1.25
GPNMB-211ENST00000479625 IGKV1-16P04430 117 aa7.23□□□□□ -1.25
GPNMB-211ENST00000479625 RPSAP08865 295 aaKnown RBP7.23□□□□□ -1.25
GPNMB-211ENST00000479625 MED14OSP0DP75 135 aa7.23□□□□□ -1.25
GPNMB-211ENST00000479625 GTF2F2P13984 249 aa7.23□□□□□ -1.25
GPNMB-211ENST00000479625 AADACP22760 399 aa7.23□□□□□ -1.25
GPNMB-211ENST00000479625 PJVKQ0ZLH3 352 aa7.23□□□□□ -1.25
GPNMB-211ENST00000479625 RIPK1Q13546 671 aa7.23□□□□□ -1.25
GPNMB-211ENST00000479625 FLOT2Q14254 428 aa7.23□□□□□ -1.25
GPNMB-211ENST00000479625 MLANAQ16655 118 aa7.23□□□□□ -1.25
GPNMB-211ENST00000479625 FAM71F2Q6NXP2 309 aa7.23□□□□□ -1.25
GPNMB-211ENST00000479625 LHFPL3Q86UP9 236 aa7.23□□□□□ -1.25
GPNMB-211ENST00000479625 DRAXINQ8NBI3 349 aaPredicted RBP7.23□□□□□ -1.25
GPNMB-211ENST00000479625 GHSRQ92847 366 aa7.23□□□□□ -1.25
GPNMB-211ENST00000479625 YPEL2Q96QA6 119 aa7.23□□□□□ -1.25
GPNMB-211ENST00000479625 S100A13Q99584 98 aa7.23□□□□□ -1.25
GPNMB-211ENST00000479625 THTPAQ9BU02 230 aa7.23□□□□□ -1.25
GPNMB-211ENST00000479625 COA4Q9NYJ1 87 aa7.23□□□□□ -1.25
GPNMB-211ENST00000479625 ARL2BPQ9Y2Y0 163 aa7.23□□□□□ -1.25
GPNMB-211ENST00000479625 A0A0B4J203 849 aa7.22□□□□□ -1.25
GPNMB-211ENST00000479625 AIREO43918 545 aa7.22□□□□□ -1.25
GPNMB-211ENST00000479625 RBBP9O75884 186 aa7.22□□□□□ -1.25
GPNMB-211ENST00000479625 NDUFB8O95169 186 aa7.22□□□□□ -1.25
GPNMB-211ENST00000479625 GTF2A1P52655 376 aaPredicted RBP7.22□□□□□ -1.25
GPNMB-211ENST00000479625 HTD2P86397 168 aa7.22□□□□□ -1.25
GPNMB-211ENST00000479625 EXOSC2Q13868 293 aaKnown RBP7.22□□□□□ -1.25
GPNMB-211ENST00000479625 SIGIRRQ6IA17 410 aa7.22□□□□□ -1.25
GPNMB-211ENST00000479625 TMEM61Q8N0U2 210 aa7.22□□□□□ -1.25
GPNMB-211ENST00000479625 ACBD7Q8N6N7 88 aa7.22□□□□□ -1.25
GPNMB-211ENST00000479625 IL1F10Q8WWZ1 152 aa7.22□□□□□ -1.25
GPNMB-211ENST00000479625 NSL1Q96IY1 281 aa7.22□□□□□ -1.25
GPNMB-211ENST00000479625 ZNF184Q99676 751 aaPredicted RBP7.22□□□□□ -1.25
GPNMB-211ENST00000479625 GABARAPL3Q9BY60 117 aa7.22□□□□□ -1.25
GPNMB-211ENST00000479625 GABARAPL1Q9H0R8 117 aa7.22□□□□□ -1.25
GPNMB-211ENST00000479625 BANF2Q9H503 90 aa7.22□□□□□ -1.25
GPNMB-211ENST00000479625 SPACA1Q9HBV2 294 aa7.22□□□□□ -1.25
GPNMB-211ENST00000479625 KCNIP1Q9NZI2 227 aa7.22□□□□□ -1.25
GPNMB-211ENST00000479625 PIPOXQ9P0Z9 390 aa7.22□□□□□ -1.25
GPNMB-211ENST00000479625 AASSQ9UDR5 926 aa7.22□□□□□ -1.25
GPNMB-211ENST00000479625 ENOPH1Q9UHY7 261 aa7.22□□□□□ -1.25
GPNMB-211ENST00000479625 C2orf70A6NJV1 201 aa7.21□□□□□ -1.26
GPNMB-211ENST00000479625 FAM90A23PA8MXZ1 464 aa7.21□□□□□ -1.26
GPNMB-211ENST00000479625 PPP5D1E7EU14 171 aa7.21□□□□□ -1.26
GPNMB-211ENST00000479625 RAB29O14966 203 aa7.21□□□□□ -1.26
GPNMB-211ENST00000479625 SPRY2O43597 315 aa7.21□□□□□ -1.26
GPNMB-211ENST00000479625 SPDEFO95238 335 aa7.21□□□□□ -1.26
GPNMB-211ENST00000479625 BAG2O95816 211 aa7.21□□□□□ -1.26
GPNMB-211ENST00000479625 HLA-AP01891 365 aaKnown RBP7.21□□□□□ -1.26
GPNMB-211ENST00000479625 PRH1P02810 166 aa7.21□□□□□ -1.26
GPNMB-211ENST00000479625 T-ENOLP0DO92 83 aa7.21□□□□□ -1.26
GPNMB-211ENST00000479625 FOLR2P14207 255 aa7.21□□□□□ -1.26
GPNMB-211ENST00000479625 CPEP16870 476 aa7.21□□□□□ -1.26
GPNMB-211ENST00000479625 BDKRB2P30411 391 aa7.21□□□□□ -1.26
GPNMB-211ENST00000479625 BMI1P35226 326 aa7.21□□□□□ -1.26
GPNMB-211ENST00000479625 KIR2DS2P43631 304 aa7.21□□□□□ -1.26
GPNMB-211ENST00000479625 PPP3R1P63098 170 aa7.21□□□□□ -1.26
GPNMB-211ENST00000479625 HMGN3Q15651 99 aa7.21□□□□□ -1.26
GPNMB-211ENST00000479625 LY6G6FQ5SQ64 297 aa7.21□□□□□ -1.26
GPNMB-211ENST00000479625 XAF1Q6GPH4 301 aa7.21□□□□□ -1.26
GPNMB-211ENST00000479625 SLC16A13Q7RTY0 426 aa7.21□□□□□ -1.26
GPNMB-211ENST00000479625 OR5AN1Q8NGI8 311 aa7.21□□□□□ -1.26
GPNMB-211ENST00000479625 OR52B4Q8NGK2 314 aa7.21□□□□□ -1.26
GPNMB-211ENST00000479625 OR13C5Q8NGS8 318 aa7.21□□□□□ -1.26
GPNMB-211ENST00000479625 KCNG3Q8TAE7 436 aa7.21□□□□□ -1.26
GPNMB-211ENST00000479625 SNAPC3Q92966 411 aa7.21□□□□□ -1.26
GPNMB-211ENST00000479625 MUL1Q969V5 352 aa7.21□□□□□ -1.26
GPNMB-211ENST00000479625 LGALS12Q96DT0 336 aa7.21□□□□□ -1.26
GPNMB-211ENST00000479625 TSNAXQ99598 290 aaKnown RBP7.21□□□□□ -1.26
GPNMB-211ENST00000479625 TMEM138Q9NPI0 162 aa7.21□□□□□ -1.26
GPNMB-211ENST00000479625 PAK1IP1Q9NWT1 392 aaPredicted RBP7.21□□□□□ -1.26
GPNMB-211ENST00000479625 ZNF230Q9UIE0 474 aaPredicted RBP7.21□□□□□ -1.26
GPNMB-211ENST00000479625 APOBP04114 4563 aaKnown RBP7.2□□□□□ -1.26
GPNMB-211ENST00000479625 ZNF780AO75290 641 aaPredicted RBP7.2□□□□□ -1.26
GPNMB-211ENST00000479625 PROP1O75360 226 aa7.2□□□□□ -1.26
GPNMB-211ENST00000479625 SCAF4O95104 1147 aaKnown RBP7.2□□□□□ -1.26
GPNMB-211ENST00000479625 HOXB6P17509 224 aaKnown RBP7.2□□□□□ -1.26
GPNMB-211ENST00000479625 CALB2P22676 271 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms