RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 FHL3Q13643 280 aa13.49□□□□□ -0.25
ECHDC1-216ENST00000479525 C2orf76Q3KRA6 126 aa13.49□□□□□ -0.25
ECHDC1-216ENST00000479525 NPBQ8NG41 125 aa13.49□□□□□ -0.25
ECHDC1-216ENST00000479525 DCUN1D4Q92564 292 aa13.49□□□□□ -0.25
ECHDC1-216ENST00000479525 FAM3DQ96BQ1 224 aa13.49□□□□□ -0.25
ECHDC1-216ENST00000479525 MS4A10Q96PG2 267 aa13.49□□□□□ -0.25
ECHDC1-216ENST00000479525 MGLLQ99685 303 aa13.49□□□□□ -0.25
ECHDC1-216ENST00000479525 CMSS1Q9BQ75 279 aaKnown RBP13.49□□□□□ -0.25
ECHDC1-216ENST00000479525 PIPOXQ9P0Z9 390 aa13.49□□□□□ -0.25
ECHDC1-216ENST00000479525 OR5H8P0DN80 308 aa13.48□□□□□ -0.25
ECHDC1-216ENST00000479525 EGR2P11161 476 aaPredicted RBP13.48□□□□□ -0.25
ECHDC1-216ENST00000479525 DEFA5Q01523 94 aa13.48□□□□□ -0.25
ECHDC1-216ENST00000479525 MLLT11Q13015 90 aaPredicted RBP13.48□□□□□ -0.25
ECHDC1-216ENST00000479525 SSX1Q16384 188 aa13.48□□□□□ -0.25
ECHDC1-216ENST00000479525 LY6G6FQ5SQ64 297 aa13.48□□□□□ -0.25
ECHDC1-216ENST00000479525 IZUMO2Q6UXV1 221 aa13.48□□□□□ -0.25
ECHDC1-216ENST00000479525 MOB1BQ7L9L4 216 aa13.48□□□□□ -0.25
ECHDC1-216ENST00000479525 FAM89BQ8N5H3 189 aa13.48□□□□□ -0.25
ECHDC1-216ENST00000479525 AGMATQ9BSE5 352 aa13.48□□□□□ -0.25
ECHDC1-216ENST00000479525 METTL1Q9UBP6 276 aaKnown RBP13.48□□□□□ -0.25
ECHDC1-216ENST00000479525 VSIG4Q9Y279 399 aa13.48□□□□□ -0.25
ECHDC1-216ENST00000479525 ERICH4A6NGS2 130 aa13.47□□□□□ -0.25
ECHDC1-216ENST00000479525 CA2P00918 260 aa13.47□□□□□ -0.25
ECHDC1-216ENST00000479525 IGKV1-16P04430 117 aa13.47□□□□□ -0.25
ECHDC1-216ENST00000479525 ZNF616Q08AN1 781 aa13.47□□□□□ -0.25
ECHDC1-216ENST00000479525 HAPLN4Q86UW8 402 aa13.47□□□□□ -0.25
ECHDC1-216ENST00000479525 ZNF383Q8NA42 475 aa13.47□□□□□ -0.25
ECHDC1-216ENST00000479525 UBE2E2Q96LR5 201 aa13.47□□□□□ -0.25
ECHDC1-216ENST00000479525 ZNF230Q9UIE0 474 aaPredicted RBP13.47□□□□□ -0.25
ECHDC1-216ENST00000479525 WASHC3Q9Y3C0 194 aa13.47□□□□□ -0.25
ECHDC1-216ENST00000479525 LRRC42Q9Y546 428 aa13.47□□□□□ -0.25
ECHDC1-216ENST00000479525 IGHV4OR15-8A0A075B7B6 117 aa13.46□□□□□ -0.25
ECHDC1-216ENST00000479525 A0A087WW49 117 aa13.46□□□□□ -0.25
ECHDC1-216ENST00000479525 TRBV6-6A0A0A6YYG2 114 aa13.46□□□□□ -0.25
ECHDC1-216ENST00000479525 BET1O15155 118 aa13.46□□□□□ -0.25
ECHDC1-216ENST00000479525 DENRO43583 198 aaKnown RBP13.46□□□□□ -0.25
ECHDC1-216ENST00000479525 ZBTB25P24278 435 aa13.46□□□□□ -0.25
ECHDC1-216ENST00000479525 C19orf54Q5BKX5 351 aa13.46□□□□□ -0.25
ECHDC1-216ENST00000479525 IGSF11Q5DX21 431 aa13.46□□□□□ -0.25
ECHDC1-216ENST00000479525 UNQ5815/PRO19632Q6UWF5 114 aa13.46□□□□□ -0.25
ECHDC1-216ENST00000479525 PRSS48Q7RTY5 328 aa13.46□□□□□ -0.25
ECHDC1-216ENST00000479525 MINDY2Q8NBR6 621 aa13.46□□□□□ -0.25
ECHDC1-216ENST00000479525 LFNGQ8NES3 379 aa13.46□□□□□ -0.25
ECHDC1-216ENST00000479525 DLX4Q92988 240 aaPredicted RBP13.46□□□□□ -0.25
ECHDC1-216ENST00000479525 C5orf30Q96GV9 206 aa13.46□□□□□ -0.25
ECHDC1-216ENST00000479525 C12orf4Q9NQ89 552 aa13.46□□□□□ -0.25
ECHDC1-216ENST00000479525 RDH8Q9NYR8 311 aa13.46□□□□□ -0.25
ECHDC1-216ENST00000479525 ELF5Q9UKW6 265 aaPredicted RBP13.46□□□□□ -0.25
ECHDC1-216ENST00000479525 KCNK7Q9Y2U2 307 aa13.46□□□□□ -0.25
ECHDC1-216ENST00000479525 LSM4Q9Y4Z0 139 aaKnown RBP13.46□□□□□ -0.25
ECHDC1-216ENST00000479525 V9GY05 133 aa13.46□□□□□ -0.25
ECHDC1-216ENST00000479525 HUWE1Q7Z6Z7 4374 aaKnown RBP13.46□□□□□ -0.25
ECHDC1-216ENST00000479525 OR5H14A6NHG9 310 aa13.45□□□□□ -0.26
ECHDC1-216ENST00000479525 M0R1X1 148 aa13.45□□□□□ -0.26
ECHDC1-216ENST00000479525 ARL6IP5O75915 188 aa13.45□□□□□ -0.26
ECHDC1-216ENST00000479525 GNB3P16520 340 aa13.45□□□□□ -0.26
ECHDC1-216ENST00000479525 RPS16P62249 146 aaKnown RBP13.45□□□□□ -0.26
ECHDC1-216ENST00000479525 PSG5Q15238 335 aa13.45□□□□□ -0.26
ECHDC1-216ENST00000479525 FAM71F2Q6NXP2 309 aa13.45□□□□□ -0.26
ECHDC1-216ENST00000479525 PPP1R27Q86WC6 154 aa13.45□□□□□ -0.26
ECHDC1-216ENST00000479525 GRPEL2Q8TAA5 225 aa13.45□□□□□ -0.26
ECHDC1-216ENST00000479525 ISYNA1Q9NPH2 558 aa13.45□□□□□ -0.26
ECHDC1-216ENST00000479525 ZNF580Q9UK33 172 aa13.45□□□□□ -0.26
ECHDC1-216ENST00000479525 FOXA2Q9Y261 457 aaPredicted RBP13.45□□□□□ -0.26
ECHDC1-216ENST00000479525 SORL1Q92673 2214 aa13.45□□□□□ -0.26
ECHDC1-216ENST00000479525 J3QRK9 145 aa13.45□□□□□ -0.26
ECHDC1-216ENST00000479525 LDLRAD4O15165 306 aa13.45□□□□□ -0.26
ECHDC1-216ENST00000479525 SLC25A17O43808 307 aa13.45□□□□□ -0.26
ECHDC1-216ENST00000479525 OR8U8P0C7N1 319 aa13.45□□□□□ -0.26
ECHDC1-216ENST00000479525 GSTT2P0CG29 244 aa13.45□□□□□ -0.26
ECHDC1-216ENST00000479525 GSTT2BP0CG30 244 aa13.45□□□□□ -0.26
ECHDC1-216ENST00000479525 OR5AN1Q8NGI8 311 aa13.45□□□□□ -0.26
ECHDC1-216ENST00000479525 ZNF221Q9UK13 617 aa13.45□□□□□ -0.26
ECHDC1-216ENST00000479525 HSF4Q9ULV5 492 aa13.45□□□□□ -0.26
ECHDC1-216ENST00000479525 NUBP2Q9Y5Y2 271 aa13.45□□□□□ -0.26
ECHDC1-216ENST00000479525 TRDCB7Z8K6 153 aa13.44□□□□□ -0.26
ECHDC1-216ENST00000479525 OVOL1O14753 267 aa13.44□□□□□ -0.26
ECHDC1-216ENST00000479525 ARPC1BO15143 372 aaKnown RBP13.44□□□□□ -0.26
ECHDC1-216ENST00000479525 RAMP3O60896 148 aa13.44□□□□□ -0.26
ECHDC1-216ENST00000479525 SAP30O75446 220 aa13.44□□□□□ -0.26
ECHDC1-216ENST00000479525 OR8U9P0C7N5 309 aa13.44□□□□□ -0.26
ECHDC1-216ENST00000479525 APELAP0DMC3 54 aa13.44□□□□□ -0.26
ECHDC1-216ENST00000479525 TPPP2P59282 170 aa13.44□□□□□ -0.26
ECHDC1-216ENST00000479525 PJVKQ0ZLH3 352 aa13.44□□□□□ -0.26
ECHDC1-216ENST00000479525 TRAM1Q15629 374 aa13.44□□□□□ -0.26
ECHDC1-216ENST00000479525 ZNF660Q6AZW8 331 aaPredicted RBP13.44□□□□□ -0.26
ECHDC1-216ENST00000479525 OR56B1Q8NGI3 324 aa13.44□□□□□ -0.26
ECHDC1-216ENST00000479525 EDARADDQ8WWZ3 215 aa13.44□□□□□ -0.26
ECHDC1-216ENST00000479525 ARPC1AQ92747 370 aa13.44□□□□□ -0.26
ECHDC1-216ENST00000479525 TOLLIPQ9H0E2 274 aa13.44□□□□□ -0.26
ECHDC1-216ENST00000479525 OR2D2Q9H210 308 aa13.44□□□□□ -0.26
ECHDC1-216ENST00000479525 RIMS4Q9H426 269 aaPredicted RBP13.44□□□□□ -0.26
ECHDC1-216ENST00000479525 ZNF256Q9Y2P7 627 aaPredicted RBP13.44□□□□□ -0.26
ECHDC1-216ENST00000479525 NBEAL2Q6ZNJ1 2754 aa13.43□□□□□ -0.26
ECHDC1-216ENST00000479525 FABP7O15540 132 aa13.43□□□□□ -0.26
ECHDC1-216ENST00000479525 TFAP2AP05549 437 aa13.43□□□□□ -0.26
ECHDC1-216ENST00000479525 FCGR3AP08637 254 aa13.43□□□□□ -0.26
ECHDC1-216ENST00000479525 ACTBL2Q562R1 376 aa13.43□□□□□ -0.26
ECHDC1-216ENST00000479525 NR2C2APQ86WQ0 139 aa13.43□□□□□ -0.26
ECHDC1-216ENST00000479525 RAB3CQ96E17 227 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms