RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 ASPHD2Q6ICH7 369 aa12.31□□□□□ -0.44
COL20A1-206ENST00000479501 TMEM252Q8N6L7 170 aa12.31□□□□□ -0.44
COL20A1-206ENST00000479501 TPRX1Q8N7U7 411 aa12.31□□□□□ -0.44
COL20A1-206ENST00000479501 OR10S1Q8NGN2 331 aa12.31□□□□□ -0.44
COL20A1-206ENST00000479501 SLC25A28Q96A46 364 aa12.31□□□□□ -0.44
COL20A1-206ENST00000479501 TREM2Q9NZC2 230 aa12.31□□□□□ -0.44
COL20A1-206ENST00000479501 TMPRSS2O15393 492 aa12.31□□□□□ -0.44
COL20A1-206ENST00000479501 PPP1CCP36873 323 aaKnown RBP12.31□□□□□ -0.44
COL20A1-206ENST00000479501 CDX1P47902 265 aaPredicted RBP12.31□□□□□ -0.44
COL20A1-206ENST00000479501 FAM3BP58499 235 aaPredicted RBP12.31□□□□□ -0.44
COL20A1-206ENST00000479501 PLAURQ03405 335 aa12.31□□□□□ -0.44
COL20A1-206ENST00000479501 COL5A1-AS1Q5SY13 56 aa12.31□□□□□ -0.44
COL20A1-206ENST00000479501 ATRAIDQ6UW56 229 aa12.31□□□□□ -0.44
COL20A1-206ENST00000479501 ADTRPQ96IZ2 230 aa12.31□□□□□ -0.44
COL20A1-206ENST00000479501 BARX1Q9HBU1 254 aaPredicted RBP12.31□□□□□ -0.44
COL20A1-206ENST00000479501 HES4Q9HCC6 221 aa12.31□□□□□ -0.44
COL20A1-206ENST00000479501 NTN3O00634 580 aaPredicted RBP12.3□□□□□ -0.44
COL20A1-206ENST00000479501 KIR2DS2P43631 304 aa12.3□□□□□ -0.44
COL20A1-206ENST00000479501 VMA21Q3ZAQ7 101 aa12.3□□□□□ -0.44
COL20A1-206ENST00000479501 H1FOOQ8IZA3 346 aaPredicted RBP12.3□□□□□ -0.44
COL20A1-206ENST00000479501 NHLRC2Q8NBF2 726 aa12.3□□□□□ -0.44
COL20A1-206ENST00000479501 TM2D1Q9BX74 207 aa12.3□□□□□ -0.44
COL20A1-206ENST00000479501 GSX1Q9H4S2 264 aaPredicted RBP12.3□□□□□ -0.44
COL20A1-206ENST00000479501 SNRNP200O75643 2136 aaKnown RBP12.3□□□□□ -0.44
COL20A1-206ENST00000479501 BCL2P10415 239 aa12.3□□□□□ -0.44
COL20A1-206ENST00000479501 HOXB1P14653 301 aaPredicted RBP12.3□□□□□ -0.44
COL20A1-206ENST00000479501 COX19Q49B96 90 aa12.3□□□□□ -0.44
COL20A1-206ENST00000479501 ZNF826PQ6ZT77 177 aa12.3□□□□□ -0.44
COL20A1-206ENST00000479501 HSD17B10Q99714 261 aaKnown RBP12.3□□□□□ -0.44
COL20A1-206ENST00000479501 ZNF319Q9P2F9 582 aa12.3□□□□□ -0.44
COL20A1-206ENST00000479501 TRAV38-1A0A0B4J264 116 aa12.3□□□□□ -0.44
COL20A1-206ENST00000479501 G6PCP35575 357 aa12.3□□□□□ -0.44
COL20A1-206ENST00000479501 RPL24P83731 157 aaKnown RBP12.3□□□□□ -0.44
COL20A1-206ENST00000479501 PRSS3P2Q8NHM4 247 aa12.3□□□□□ -0.44
COL20A1-206ENST00000479501 RAB24Q969Q5 203 aa12.3□□□□□ -0.44
COL20A1-206ENST00000479501 TMEM56Q96MV1 263 aa12.3□□□□□ -0.44
COL20A1-206ENST00000479501 GPHA2Q96T91 129 aa12.3□□□□□ -0.44
COL20A1-206ENST00000479501 NPTNQ9Y639 398 aa12.3□□□□□ -0.44
COL20A1-206ENST00000479501 PLXNA2O75051 1894 aa12.3□□□□□ -0.44
COL20A1-206ENST00000479501 H0Y980 276 aa12.3□□□□□ -0.44
COL20A1-206ENST00000479501 M0R2Z0 102 aa12.3□□□□□ -0.44
COL20A1-206ENST00000479501 OR5AL1P0C617 328 aa12.3□□□□□ -0.44
COL20A1-206ENST00000479501 PRDX2P32119 198 aa12.3□□□□□ -0.44
COL20A1-206ENST00000479501 HFEQ30201 348 aa12.3□□□□□ -0.44
COL20A1-206ENST00000479501 C1orf174Q8IYL3 243 aa12.3□□□□□ -0.44
COL20A1-206ENST00000479501 OPN3Q9H1Y3 402 aaPredicted RBP12.3□□□□□ -0.44
COL20A1-206ENST00000479501 IL36GQ9NZH8 169 aa12.3□□□□□ -0.44
COL20A1-206ENST00000479501 FBLN5Q9UBX5 448 aa12.3□□□□□ -0.44
COL20A1-206ENST00000479501 MPDZO75970 2070 aa12.29□□□□□ -0.44
COL20A1-206ENST00000479501 H0YL77 283 aa12.29□□□□□ -0.44
COL20A1-206ENST00000479501 SGMS2Q8NHU3 365 aa12.29□□□□□ -0.44
COL20A1-206ENST00000479501 SPTBN1Q01082 2364 aaKnown RBP12.29□□□□□ -0.44
COL20A1-206ENST00000479501 PHF3Q92576 2039 aaKnown RBP12.29□□□□□ -0.44
COL20A1-206ENST00000479501 CYB5R3P00387 301 aaPredicted RBP12.29□□□□□ -0.44
COL20A1-206ENST00000479501 PGA5P0DJD9 388 aa12.29□□□□□ -0.44
COL20A1-206ENST00000479501 CXorf66Q5JRM2 361 aaPredicted RBP12.29□□□□□ -0.44
COL20A1-206ENST00000479501 ABLIM2Q6H8Q1 611 aa12.29□□□□□ -0.44
COL20A1-206ENST00000479501 MOB3BQ86TA1 216 aa12.29□□□□□ -0.44
COL20A1-206ENST00000479501 IGKV1-9A0A0C4DH69 117 aa12.29□□□□□ -0.44
COL20A1-206ENST00000479501 SNURFLB1AK76 121 aa12.29□□□□□ -0.44
COL20A1-206ENST00000479501 ID4P47928 161 aa12.29□□□□□ -0.44
COL20A1-206ENST00000479501 FHL1Q13642 323 aa12.29□□□□□ -0.44
COL20A1-206ENST00000479501 VWA1Q6PCB0 445 aa12.29□□□□□ -0.44
COL20A1-206ENST00000479501 TMEM105Q8N8V8 129 aa12.29□□□□□ -0.44
COL20A1-206ENST00000479501 BCL2L2Q92843 193 aaPredicted RBP12.29□□□□□ -0.44
COL20A1-206ENST00000479501 NDFIP1Q9BT67 221 aa12.29□□□□□ -0.44
COL20A1-206ENST00000479501 TMEM191AQ9H0A3 160 aa12.29□□□□□ -0.44
COL20A1-206ENST00000479501 WIPI2Q9Y4P8 454 aa12.29□□□□□ -0.44
COL20A1-206ENST00000479501 FAM90A27PA6NNH2 459 aa12.29□□□□□ -0.44
COL20A1-206ENST00000479501 C16orf97H3BN30 126 aa12.29□□□□□ -0.44
COL20A1-206ENST00000479501 HKR1P10072 659 aa12.29□□□□□ -0.44
COL20A1-206ENST00000479501 HTR1DP28221 377 aa12.29□□□□□ -0.44
COL20A1-206ENST00000479501 IER3P46695 156 aa12.29□□□□□ -0.44
COL20A1-206ENST00000479501 COL10A1Q03692 680 aa12.29□□□□□ -0.44
COL20A1-206ENST00000479501 GGACTQ9BVM4 153 aa12.29□□□□□ -0.44
COL20A1-206ENST00000479501 SH2D2AQ9NP31 389 aa12.29□□□□□ -0.44
COL20A1-206ENST00000479501 CTXND1A0A1B0GTU2 59 aa12.28□□□□□ -0.44
COL20A1-206ENST00000479501 FAM117AQ9C073 453 aa12.28□□□□□ -0.44
COL20A1-206ENST00000479501 METTL1Q9UBP6 276 aaKnown RBP12.28□□□□□ -0.44
COL20A1-206ENST00000479501 LOC102724200A0A096LPH7 203 aaPredicted RBP12.28□□□□□ -0.44
COL20A1-206ENST00000479501 HSPB1P04792 205 aaKnown RBP12.28□□□□□ -0.44
COL20A1-206ENST00000479501 NRN1LQ496H8 165 aa12.28□□□□□ -0.44
COL20A1-206ENST00000479501 MRPL54Q6P161 138 aaKnown RBP12.28□□□□□ -0.44
COL20A1-206ENST00000479501 C16orf82Q7Z2V1 217 aa12.28□□□□□ -0.44
COL20A1-206ENST00000479501 CALHM1Q8IU99 346 aa12.28□□□□□ -0.44
COL20A1-206ENST00000479501 SAP30LQ9HAJ7 183 aa12.28□□□□□ -0.44
COL20A1-206ENST00000479501 MRPS18CQ9Y3D5 142 aaKnown RBP12.28□□□□□ -0.44
COL20A1-206ENST00000479501 IGHV3OR15-7A0A075B7D8 119 aa12.28□□□□□ -0.44
COL20A1-206ENST00000479501 HBZP02008 142 aa12.28□□□□□ -0.44
COL20A1-206ENST00000479501 CTSSP25774 331 aa12.28□□□□□ -0.44
COL20A1-206ENST00000479501 UCP3P55916 312 aa12.28□□□□□ -0.44
COL20A1-206ENST00000479501 PAQR4Q8N4S7 273 aaPredicted RBP12.28□□□□□ -0.44
COL20A1-206ENST00000479501 FDCSPQ8NFU4 85 aa12.28□□□□□ -0.44
COL20A1-206ENST00000479501 OR8G5Q8NG78 346 aa12.28□□□□□ -0.44
COL20A1-206ENST00000479501 KLF14Q8TD94 323 aaPredicted RBP12.28□□□□□ -0.44
COL20A1-206ENST00000479501 RND1Q92730 232 aa12.28□□□□□ -0.44
COL20A1-206ENST00000479501 POLEQ07864 2286 aa12.27□□□□□ -0.44
COL20A1-206ENST00000479501 HELZP42694 1942 aaKnown RBP12.27□□□□□ -0.44
COL20A1-206ENST00000479501 C9orf172C9J069 976 aa12.27□□□□□ -0.44
COL20A1-206ENST00000479501 PGLYRP1O75594 196 aaPredicted RBP12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms