RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 CD36P16671 472 aa2.65□□□□□ -1.99
UPF3B-203ENST00000478840 ZNF7P17097 686 aaPredicted RBP2.65□□□□□ -1.99
UPF3B-203ENST00000478840 ATP6V0CP27449 155 aa2.65□□□□□ -1.99
UPF3B-203ENST00000478840 CTBP2P56545 445 aa2.65□□□□□ -1.99
UPF3B-203ENST00000478840 SDIM1Q6ZPB5 146 aa2.65□□□□□ -1.99
UPF3B-203ENST00000478840 RASSF6Q6ZTQ3 369 aa2.65□□□□□ -1.99
UPF3B-203ENST00000478840 LINC00304Q8N9R0 145 aa2.65□□□□□ -1.99
UPF3B-203ENST00000478840 OR1M1Q8NGA1 313 aa2.65□□□□□ -1.99
UPF3B-203ENST00000478840 C16orf78Q8WTQ4 265 aa2.65□□□□□ -1.99
UPF3B-203ENST00000478840 TVP23CQ96ET8 276 aa2.65□□□□□ -1.99
UPF3B-203ENST00000478840 TMA16Q96EY4 203 aaKnown RBP2.65□□□□□ -1.99
UPF3B-203ENST00000478840 ANKRD36BP1Q96IX9 119 aa2.65□□□□□ -1.99
UPF3B-203ENST00000478840 SLC35G5Q96KT7 338 aa2.65□□□□□ -1.99
UPF3B-203ENST00000478840 STACQ99469 402 aa2.65□□□□□ -1.99
UPF3B-203ENST00000478840 PKMYT1Q99640 499 aa2.65□□□□□ -1.99
UPF3B-203ENST00000478840 NKX6-2Q9C056 277 aaPredicted RBP2.65□□□□□ -1.99
UPF3B-203ENST00000478840 C11orf1Q9H5F2 150 aa2.65□□□□□ -1.99
UPF3B-203ENST00000478840 XPNPEP1Q9NQW7 623 aa2.65□□□□□ -1.99
UPF3B-203ENST00000478840 HHLA2Q9UM44 414 aa2.65□□□□□ -1.99
UPF3B-203ENST00000478840 DSCAML1Q8TD84 2053 aa2.64□□□□□ -1.99
UPF3B-203ENST00000478840 COL4A4P53420 1690 aaPredicted RBP2.64□□□□□ -1.99
UPF3B-203ENST00000478840 ZSWIM8A7E2V4 1837 aa2.64□□□□□ -1.99
UPF3B-203ENST00000478840 IGKV1D-17A0A075B6S4 117 aa2.64□□□□□ -1.99
UPF3B-203ENST00000478840 IGSF23A1L1A6 192 aa2.64□□□□□ -1.99
UPF3B-203ENST00000478840 KCNK1O00180 336 aa2.64□□□□□ -1.99
UPF3B-203ENST00000478840 KRT75O95678 551 aa2.64□□□□□ -1.99
UPF3B-203ENST00000478840 REG1AP05451 166 aa2.64□□□□□ -1.99
UPF3B-203ENST00000478840 HIST1H1EP10412 219 aaKnown RBP2.64□□□□□ -1.99
UPF3B-203ENST00000478840 COL8A2P25067 703 aa2.64□□□□□ -1.99
UPF3B-203ENST00000478840 PPP1CCP36873 323 aaKnown RBP2.64□□□□□ -1.99
UPF3B-203ENST00000478840 CDKN2CP42773 168 aa2.64□□□□□ -1.99
UPF3B-203ENST00000478840 CEBPGP53567 150 aa2.64□□□□□ -1.99
UPF3B-203ENST00000478840 RAB5BP61020 215 aa2.64□□□□□ -1.99
UPF3B-203ENST00000478840 NAA20P61599 178 aa2.64□□□□□ -1.99
UPF3B-203ENST00000478840 EMX1Q04741 257 aaPredicted RBP2.64□□□□□ -1.99
UPF3B-203ENST00000478840 FAM78BQ5VT40 261 aa2.64□□□□□ -1.99
UPF3B-203ENST00000478840 SLC51BQ86UW2 128 aa2.64□□□□□ -1.99
UPF3B-203ENST00000478840 OR10P1Q8NGE3 313 aa2.64□□□□□ -1.99
UPF3B-203ENST00000478840 OR2D3Q8NGH3 330 aa2.64□□□□□ -1.99
UPF3B-203ENST00000478840 MFSD8Q8NHS3 518 aa2.64□□□□□ -1.99
UPF3B-203ENST00000478840 IGF2BP2-AS1Q96M15 143 aa2.64□□□□□ -1.99
UPF3B-203ENST00000478840 HIGD2AQ9BW72 106 aa2.64□□□□□ -1.99
UPF3B-203ENST00000478840 OR51I2Q9H344 312 aa2.64□□□□□ -1.99
UPF3B-203ENST00000478840 TAS2R9Q9NYW1 312 aa2.64□□□□□ -1.99
UPF3B-203ENST00000478840 SHANK1Q9Y566 2161 aa2.64□□□□□ -1.99
UPF3B-203ENST00000478840 EVC2Q86UK5 1308 aa2.64□□□□□ -1.99
UPF3B-203ENST00000478840 LTBP4Q8N2S1 1624 aa2.64□□□□□ -1.99
UPF3B-203ENST00000478840 SHROOM3Q8TF72 1996 aa2.63□□□□□ -1.99
UPF3B-203ENST00000478840 IGKV2-24A0A0C4DH68 120 aa2.63□□□□□ -1.99
UPF3B-203ENST00000478840 A0A1W2PNN7 141 aa2.63□□□□□ -1.99
UPF3B-203ENST00000478840 GOLGA6L19H0YKK7 550 aa2.63□□□□□ -1.99
UPF3B-203ENST00000478840 GSTZ1O43708 216 aaPredicted RBP2.63□□□□□ -1.99
UPF3B-203ENST00000478840 IGLV6-57P01721 117 aa2.63□□□□□ -1.99
UPF3B-203ENST00000478840 ZNF22P17026 224 aaPredicted RBP2.63□□□□□ -1.99
UPF3B-203ENST00000478840 TSPEAR-AS2P59090 65 aa2.63□□□□□ -1.99
UPF3B-203ENST00000478840 KRTAP10-8P60410 259 aa2.63□□□□□ -1.99
UPF3B-203ENST00000478840 BAMBIQ13145 260 aa2.63□□□□□ -1.99
UPF3B-203ENST00000478840 FADDQ13158 208 aa2.63□□□□□ -1.99
UPF3B-203ENST00000478840 UAP1Q16222 522 aaPredicted RBP2.63□□□□□ -1.99
UPF3B-203ENST00000478840 HIST3H3Q16695 136 aa2.63□□□□□ -1.99
UPF3B-203ENST00000478840 PLPPR5Q32ZL2 321 aa2.63□□□□□ -1.99
UPF3B-203ENST00000478840 SPIN3Q5JUX0 258 aa2.63□□□□□ -1.99
UPF3B-203ENST00000478840 LCE3AQ5TA76 89 aa2.63□□□□□ -1.99
UPF3B-203ENST00000478840 OR10K2Q6IF99 312 aa2.63□□□□□ -1.99
UPF3B-203ENST00000478840 SFXN4Q6P4A7 337 aa2.63□□□□□ -1.99
UPF3B-203ENST00000478840 GID4Q8IVV7 300 aa2.63□□□□□ -1.99
UPF3B-203ENST00000478840 C1orf174Q8IYL3 243 aa2.63□□□□□ -1.99
UPF3B-203ENST00000478840 UBL4BQ8N7F7 174 aa2.63□□□□□ -1.99
UPF3B-203ENST00000478840 LY6G5BQ8NDX9 201 aa2.63□□□□□ -1.99
UPF3B-203ENST00000478840 CMTM2Q8TAZ6 248 aa2.63□□□□□ -1.99
UPF3B-203ENST00000478840 ASB17Q8WXJ9 295 aa2.63□□□□□ -1.99
UPF3B-203ENST00000478840 OR8B2Q96RD0 313 aa2.63□□□□□ -1.99
UPF3B-203ENST00000478840 LCE3DQ9BYE3 92 aa2.63□□□□□ -1.99
UPF3B-203ENST00000478840 SMDT1Q9H4I9 107 aa2.63□□□□□ -1.99
UPF3B-203ENST00000478840 PTPRJQ12913 1337 aa2.63□□□□□ -1.99
UPF3B-203ENST00000478840 OTOFQ9HC10 1997 aa2.62□□□□□ -1.99
UPF3B-203ENST00000478840 DHRS12A0PJE2 317 aa2.62□□□□□ -1.99
UPF3B-203ENST00000478840 EVPLLA8MZ36 301 aa2.62□□□□□ -1.99
UPF3B-203ENST00000478840 DISC1C4P0D8 188 aa2.62□□□□□ -1.99
UPF3B-203ENST00000478840 CDS2O95674 445 aa2.62□□□□□ -1.99
UPF3B-203ENST00000478840 CRYGDP07320 174 aa2.62□□□□□ -1.99
UPF3B-203ENST00000478840 NPPCP23582 126 aa2.62□□□□□ -1.99
UPF3B-203ENST00000478840 CCR7P32248 378 aa2.62□□□□□ -1.99
UPF3B-203ENST00000478840 TMEM33P57088 247 aa2.62□□□□□ -1.99
UPF3B-203ENST00000478840 TAS2R45P59539 299 aa2.62□□□□□ -1.99
UPF3B-203ENST00000478840 KRTAP10-10P60014 251 aa2.62□□□□□ -1.99
UPF3B-203ENST00000478840 CTAG1AP78358 180 aa2.62□□□□□ -1.99
UPF3B-203ENST00000478840 BTN3A2P78410 334 aa2.62□□□□□ -1.99
UPF3B-203ENST00000478840 OR2F1Q13607 317 aa2.62□□□□□ -1.99
UPF3B-203ENST00000478840 RSU1Q15404 277 aa2.62□□□□□ -1.99
UPF3B-203ENST00000478840 BATFQ16520 125 aa2.62□□□□□ -1.99
UPF3B-203ENST00000478840 LRRC75BQ2VPJ9 315 aa2.62□□□□□ -1.99
UPF3B-203ENST00000478840 TMEM176BQ3YBM2 270 aaPredicted RBP2.62□□□□□ -1.99
UPF3B-203ENST00000478840 NOXRED1Q6NXP6 359 aa2.62□□□□□ -1.99
UPF3B-203ENST00000478840 SBSNQ6UWP8 590 aa2.62□□□□□ -1.99
UPF3B-203ENST00000478840 ZNF550Q7Z398 422 aa2.62□□□□□ -1.99
UPF3B-203ENST00000478840 TMEM109Q9BVC6 243 aa2.62□□□□□ -1.99
UPF3B-203ENST00000478840 OR51I1Q9H343 314 aa2.62□□□□□ -1.99
UPF3B-203ENST00000478840 KLK5Q9Y337 293 aaPredicted RBP2.62□□□□□ -1.99
UPF3B-203ENST00000478840 OBSCNQ5VST9 7968 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms