RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 GTF3AQ92664 365 aaKnown RBP3.61□□□□□ -1.83
GPNMB-210ENST00000478451 RND1Q92730 232 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 PINX1Q96BK5 328 aaKnown RBP3.61□□□□□ -1.83
GPNMB-210ENST00000478451 FBXO17Q96EF6 278 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 BTF3L4Q96K17 158 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 RAB40CQ96S21 281 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 P2RX4Q99571 388 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 ATP5SQ99766 215 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 NIT2Q9NQR4 276 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 FBXO7Q9Y3I1 522 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 ABCA7Q8IZY2 2146 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 ASCC3Q8N3C0 2202 aaKnown RBP3.6□□□□□ -1.83
GPNMB-210ENST00000478451 CACNA1EQ15878 2313 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 IGKV1D-8A0A087WSZ0 117 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 TRBV6-6A0A0A6YYG2 114 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 TRAV1-1A0A0B4J248 108 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 A0A1B0GU03 582 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 OR5B21A6NL26 309 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 SEC14L6B5MCN3 397 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 FAM90A26D6RGX4 464 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 ZNF587BE7ETH6 402 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 H3BQ15 152 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 TNFSF11O14788 317 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 ANGPTL7O43827 346 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 SSSCA1O60232 199 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 SOX15O60248 233 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 OR7C1O76099 320 aaPredicted RBP3.6□□□□□ -1.83
GPNMB-210ENST00000478451 IGHV2-5P01817 119 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 OPN1LWP04000 364 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 SERPINE2P07093 398 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 FBP1P09467 338 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 OR8U8P0C7N1 319 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 OR13C7P0DN81 318 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 ZNF32P17041 273 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 ACKR3P25106 362 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 MT3P25713 68 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 UCP1P25874 307 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 ATP6V0CP27449 155 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 OPRM1P35372 400 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 ARR3P36575 388 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 RPS10P46783 165 aaKnown RBP3.6□□□□□ -1.83
GPNMB-210ENST00000478451 CDX1P47902 265 aaPredicted RBP3.6□□□□□ -1.83
GPNMB-210ENST00000478451 CXCL12P48061 93 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 MLF1P58340 268 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 ERVFC1-1P60608 527 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 FGF12P61328 243 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 CCL7P80098 99 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 SERF2P84101 59 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 ZNF92Q03936 586 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 ZNF674Q2M3X9 581 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 SNAI3Q3KNW1 292 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 KRTAP27-1Q3LI81 207 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 PIGYQ3MUY2 71 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 SP6Q3SY56 376 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 PHYHD1Q5SRE7 291 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 LYSMD4Q5XG99 296 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 ADAM5Q6NVV9 412 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 ZNF774Q6NX45 483 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 FIP1L1Q6UN15 594 aaKnown RBP3.6□□□□□ -1.83
GPNMB-210ENST00000478451 HEPN1Q6WQI6 88 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 RBMS3Q6XE24 437 aaKnown RBP3.6□□□□□ -1.83
GPNMB-210ENST00000478451 MRPL21Q7Z2W9 205 aaKnown RBP3.6□□□□□ -1.83
GPNMB-210ENST00000478451 RTN4RL2Q86UN3 420 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 Q8IYB0 196 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 SELENOHQ8IZQ5 122 aaKnown RBP3.6□□□□□ -1.83
GPNMB-210ENST00000478451 FAM24BQ8N5W8 94 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 ZNF611Q8N823 705 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 OR52M1Q8NGK5 317 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 OR5C1Q8NGR4 320 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 OR2Y1Q8NGV0 311 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 OR2AE1Q8NHA4 323 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 OR2V1Q8NHB1 315 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 OR10J5Q8NHC4 309 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 NEK7Q8TDX7 302 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 HPSE2Q8WWQ2 592 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 PIGCQ92535 297 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 MR1Q95460 341 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 SLAMF9Q96A28 289 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 APOBEC3DQ96AK3 386 aaPredicted RBP3.6□□□□□ -1.83
GPNMB-210ENST00000478451 TMEM45BQ96B21 275 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 IMMP1LQ96LU5 166 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 JSRP1Q96MG2 331 aaPredicted RBP3.6□□□□□ -1.83
GPNMB-210ENST00000478451 ZNF385AQ96PM9 386 aaKnown RBP3.6□□□□□ -1.83
GPNMB-210ENST00000478451 PFDN5Q99471 154 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 CITED2Q99967 270 aaPredicted RBP3.6□□□□□ -1.83
GPNMB-210ENST00000478451 HDHD3Q9BSH5 251 aaPredicted RBP3.6□□□□□ -1.83
GPNMB-210ENST00000478451 PSMG3Q9BT73 122 aaPredicted RBP3.6□□□□□ -1.83
GPNMB-210ENST00000478451 C1QTNF4Q9BXJ3 329 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 PARD6GQ9BYG4 376 aaPredicted RBP3.6□□□□□ -1.83
GPNMB-210ENST00000478451 LINC00470Q9BZP3 86 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 OR2H1Q9GZK4 316 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 TOLLIPQ9H0E2 274 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 CRLF2Q9HC73 371 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 Q9N2K0 584 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 TMEM242Q9NWH2 141 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 B4GALT7Q9UBV7 327 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 TINAGQ9UJW2 476 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 BOKQ9UMX3 212 aaPredicted RBP3.6□□□□□ -1.83
GPNMB-210ENST00000478451 MMP24Q9Y5R2 645 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 MPC1Q9Y5U8 109 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms