RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, human

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM13-208	ENST00000478111	ACTBL2	Q562R1	376 aa		12.84	□□□□□ -0.35
TRIM13-208	ENST00000478111	RNLS	Q5VYX0	342 aa		12.84	□□□□□ -0.35
TRIM13-208	ENST00000478111	PYHIN1	Q6K0P9	492 aa		12.84	□□□□□ -0.35
TRIM13-208	ENST00000478111	UNQ5815/PRO19632	Q6UWF5	114 aa		12.84	□□□□□ -0.35
TRIM13-208	ENST00000478111	ZNF562	Q6V9R5	426 aa		12.84	□□□□□ -0.35
TRIM13-208	ENST00000478111	MS4A15	Q8N5U1	240 aa		12.84	□□□□□ -0.35
TRIM13-208	ENST00000478111	LFNG	Q8NES3	379 aa		12.84	□□□□□ -0.35
TRIM13-208	ENST00000478111	MS4A10	Q96PG2	267 aa		12.84	□□□□□ -0.35
TRIM13-208	ENST00000478111	CLCC1	Q96S66	551 aa		12.84	□□□□□ -0.35
TRIM13-208	ENST00000478111	RNF5	Q99942	180 aa		12.84	□□□□□ -0.35
TRIM13-208	ENST00000478111	HDHD3	Q9BSH5	251 aa	Predicted RBP	12.84	□□□□□ -0.35
TRIM13-208	ENST00000478111	LPAR5	Q9H1C0	372 aa		12.84	□□□□□ -0.35
TRIM13-208	ENST00000478111	GHITM	Q9H3K2	345 aa		12.84	□□□□□ -0.35
TRIM13-208	ENST00000478111	OR1A1	Q9P1Q5	309 aa		12.84	□□□□□ -0.35
TRIM13-208	ENST00000478111	WASHC3	Q9Y3C0	194 aa		12.84	□□□□□ -0.35
TRIM13-208	ENST00000478111	FOXI3	A8MTJ6	420 aa	Predicted RBP	12.83	□□□□□ -0.36
TRIM13-208	ENST00000478111		H7C2Y5	167 aa		12.83	□□□□□ -0.36
TRIM13-208	ENST00000478111	SOCS1	O15524	211 aa		12.83	□□□□□ -0.36
TRIM13-208	ENST00000478111	OR8U9	P0C7N5	309 aa		12.83	□□□□□ -0.36
TRIM13-208	ENST00000478111	CEACAM6	P40199	344 aa		12.83	□□□□□ -0.36
TRIM13-208	ENST00000478111	SSBP2	P81877	361 aa	Predicted RBP	12.83	□□□□□ -0.36
TRIM13-208	ENST00000478111	RBM48	Q5RL73	367 aa	Known RBP	12.83	□□□□□ -0.36
TRIM13-208	ENST00000478111	MOB1B	Q7L9L4	216 aa		12.83	□□□□□ -0.36
TRIM13-208	ENST00000478111		Q8N1Y9	231 aa		12.83	□□□□□ -0.36
TRIM13-208	ENST00000478111	FAM89B	Q8N5H3	189 aa		12.83	□□□□□ -0.36
TRIM13-208	ENST00000478111	DRAXIN	Q8NBI3	349 aa	Predicted RBP	12.83	□□□□□ -0.36
TRIM13-208	ENST00000478111	OR6Q1	Q8NGQ2	317 aa		12.83	□□□□□ -0.36
TRIM13-208	ENST00000478111	SETD6	Q8TBK2	473 aa		12.83	□□□□□ -0.36
TRIM13-208	ENST00000478111	PTX4	Q96A99	478 aa		12.83	□□□□□ -0.36
TRIM13-208	ENST00000478111	GFI1	Q99684	422 aa		12.83	□□□□□ -0.36
TRIM13-208	ENST00000478111	TMED9	Q9BVK6	235 aa		12.83	□□□□□ -0.36
TRIM13-208	ENST00000478111	CHMP1A	Q9HD42	196 aa	Predicted RBP	12.83	□□□□□ -0.36
TRIM13-208	ENST00000478111	PLEKHJ1	Q9NW61	149 aa		12.83	□□□□□ -0.36
TRIM13-208	ENST00000478111	METTL1	Q9UBP6	276 aa	Known RBP	12.83	□□□□□ -0.36
TRIM13-208	ENST00000478111	AK3	Q9UIJ7	227 aa		12.83	□□□□□ -0.36
TRIM13-208	ENST00000478111	LSM2	Q9Y333	95 aa	Known RBP	12.83	□□□□□ -0.36
TRIM13-208	ENST00000478111	HYDIN	Q4G0P3	5121 aa		12.82	□□□□□ -0.36
TRIM13-208	ENST00000478111	EBAG9	O00559	213 aa		12.82	□□□□□ -0.36
TRIM13-208	ENST00000478111	BPNT1	O95861	308 aa		12.82	□□□□□ -0.36
TRIM13-208	ENST00000478111	CA2	P00918	260 aa		12.82	□□□□□ -0.36
TRIM13-208	ENST00000478111	IGKV1-16	P04430	117 aa		12.82	□□□□□ -0.36
TRIM13-208	ENST00000478111	CDK1	P06493	297 aa		12.82	□□□□□ -0.36
TRIM13-208	ENST00000478111	SCT	P09683	121 aa		12.82	□□□□□ -0.36
TRIM13-208	ENST00000478111	TMEM50B	P56557	158 aa		12.82	□□□□□ -0.36
TRIM13-208	ENST00000478111	CEACAM19	Q7Z692	300 aa		12.82	□□□□□ -0.36
TRIM13-208	ENST00000478111	ZNF383	Q8NA42	475 aa		12.82	□□□□□ -0.36
TRIM13-208	ENST00000478111	ABHD5	Q8WTS1	349 aa		12.82	□□□□□ -0.36
TRIM13-208	ENST00000478111	RIMS4	Q9H426	269 aa	Predicted RBP	12.82	□□□□□ -0.36
TRIM13-208	ENST00000478111	RNF150	Q9ULK6	438 aa		12.82	□□□□□ -0.36
TRIM13-208	ENST00000478111	BIRC6	Q9NR09	4857 aa		12.82	□□□□□ -0.36
TRIM13-208	ENST00000478111	IGKV1-6	A0A0C4DH72	117 aa		12.81	□□□□□ -0.36
TRIM13-208	ENST00000478111	ARPC1B	O15143	372 aa	Known RBP	12.81	□□□□□ -0.36
TRIM13-208	ENST00000478111	UCHL1	P09936	223 aa		12.81	□□□□□ -0.36
TRIM13-208	ENST00000478111	ZBTB25	P24278	435 aa		12.81	□□□□□ -0.36
TRIM13-208	ENST00000478111	TPPP2	P59282	170 aa		12.81	□□□□□ -0.36
TRIM13-208	ENST00000478111	HLA-DRB3	P79483	266 aa		12.81	□□□□□ -0.36
TRIM13-208	ENST00000478111	PITPNA	Q00169	270 aa		12.81	□□□□□ -0.36
TRIM13-208	ENST00000478111	HSD17B12	Q53GQ0	312 aa		12.81	□□□□□ -0.36
TRIM13-208	ENST00000478111	HAPLN4	Q86UW8	402 aa		12.81	□□□□□ -0.36
TRIM13-208	ENST00000478111	OR6M1	Q8NGM8	313 aa		12.81	□□□□□ -0.36
TRIM13-208	ENST00000478111	EDARADD	Q8WWZ3	215 aa		12.81	□□□□□ -0.36
TRIM13-208	ENST00000478111	FLYWCH2	Q96CP2	140 aa	Known RBP	12.81	□□□□□ -0.36
TRIM13-208	ENST00000478111	OR4C12	Q96R67	309 aa		12.81	□□□□□ -0.36
TRIM13-208	ENST00000478111	TM2D3	Q9BRN9	247 aa		12.81	□□□□□ -0.36
TRIM13-208	ENST00000478111	MND1	Q9BWT6	205 aa		12.81	□□□□□ -0.36
TRIM13-208	ENST00000478111	SLA2	Q9H6Q3	261 aa		12.81	□□□□□ -0.36
TRIM13-208	ENST00000478111		Q9N2K0	584 aa		12.81	□□□□□ -0.36
TRIM13-208	ENST00000478111	SPDEF	O95238	335 aa		12.8	□□□□□ -0.36
TRIM13-208	ENST00000478111	IGLV1-51	P01701	117 aa		12.8	□□□□□ -0.36
TRIM13-208	ENST00000478111	TFAP2A	P05549	437 aa		12.8	□□□□□ -0.36
TRIM13-208	ENST00000478111	SRSF7	Q16629	238 aa	Known RBP eCLIP	12.8	□□□□□ -0.36
TRIM13-208	ENST00000478111	OGFRL1	Q5TC84	451 aa	Predicted RBP	12.8	□□□□□ -0.36
TRIM13-208	ENST00000478111	CITED4	Q96RK1	184 aa		12.8	□□□□□ -0.36
TRIM13-208	ENST00000478111	C19orf73	Q9NVV2	129 aa		12.8	□□□□□ -0.36
TRIM13-208	ENST00000478111	GAR1	Q9NY12	217 aa	Known RBP	12.8	□□□□□ -0.36
TRIM13-208	ENST00000478111	HSF4	Q9ULV5	492 aa		12.8	□□□□□ -0.36
TRIM13-208	ENST00000478111	CASQ2	O14958	399 aa	Predicted RBP	12.79	□□□□□ -0.36
TRIM13-208	ENST00000478111	TRGV3	P03979	118 aa		12.79	□□□□□ -0.36
TRIM13-208	ENST00000478111	CPE	P16870	476 aa		12.79	□□□□□ -0.36
TRIM13-208	ENST00000478111	RPS16	P62249	146 aa	Known RBP	12.79	□□□□□ -0.36
TRIM13-208	ENST00000478111	RCN1	Q15293	331 aa		12.79	□□□□□ -0.36
TRIM13-208	ENST00000478111	P2RY14	Q15391	338 aa		12.79	□□□□□ -0.36
TRIM13-208	ENST00000478111	SPHAR	Q15513	63 aa		12.79	□□□□□ -0.36
TRIM13-208	ENST00000478111	TMEM91	Q6ZNR0	172 aa		12.79	□□□□□ -0.36
TRIM13-208	ENST00000478111	TSNAX	Q99598	290 aa	Known RBP	12.79	□□□□□ -0.36
TRIM13-208	ENST00000478111	ZMAT4	Q9H898	229 aa		12.79	□□□□□ -0.36
TRIM13-208	ENST00000478111		A8MZ25	164 aa		12.78	□□□□□ -0.36
TRIM13-208	ENST00000478111	PTGES3L	E9PB15	166 aa		12.78	□□□□□ -0.36
TRIM13-208	ENST00000478111	SLC17A2	O00624	439 aa		12.78	□□□□□ -0.36
TRIM13-208	ENST00000478111	HSPA12A	O43301	675 aa		12.78	□□□□□ -0.36
TRIM13-208	ENST00000478111	SLC25A17	O43808	307 aa		12.78	□□□□□ -0.36
TRIM13-208	ENST00000478111	IGLV2-23	P01705	113 aa		12.78	□□□□□ -0.36
TRIM13-208	ENST00000478111	CRYGB	P07316	175 aa		12.78	□□□□□ -0.36
TRIM13-208	ENST00000478111	IGHV4-30-4	P0DP06	118 aa		12.78	□□□□□ -0.36
TRIM13-208	ENST00000478111	LYL1	P12980	280 aa		12.78	□□□□□ -0.36
TRIM13-208	ENST00000478111	ARSB	P15848	533 aa		12.78	□□□□□ -0.36
TRIM13-208	ENST00000478111	IRF3	Q14653	427 aa		12.78	□□□□□ -0.36
TRIM13-208	ENST00000478111	FXYD3	Q14802	87 aa		12.78	□□□□□ -0.36
TRIM13-208	ENST00000478111	IL34	Q6ZMJ4	242 aa		12.78	□□□□□ -0.36
TRIM13-208	ENST00000478111	PDPN	Q86YL7	162 aa		12.78	□□□□□ -0.36

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